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Phylogeographic
Phylogeography is the study of the historical processes that may be responsible for the past to present geographic distributions of genealogical lineages. This is accomplished by considering the geographic distribution of individuals in light of genetics, particularly population genetics. This term was introduced to describe geographically structured genetic signals within and among species. An explicit focus on a species' biogeography/biogeographical past sets phylogeography apart from classical population genetics and phylogenetics. Past events that can be inferred include population expansion, population bottlenecks, vicariance, dispersal, and migration. Recently developed approaches integrating coalescent theory or the genealogical history of alleles and distributional information can more accurately address the relative roles of these different historical forces in shaping current patterns. Historical development The term phylogeography was first used by John Avise in his ...
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Phylogenetics
In biology, phylogenetics () is the study of the evolutionary history of life using observable characteristics of organisms (or genes), which is known as phylogenetic inference. It infers the relationship among organisms based on empirical data and observed heritable traits of DNA sequences, protein amino acid sequences, and morphology. The results are a phylogenetic tree—a diagram depicting the hypothetical relationships among the organisms, reflecting their inferred evolutionary history. The tips of a phylogenetic tree represent the observed entities, which can be living taxa or fossils. A phylogenetic diagram can be rooted or unrooted. A rooted tree diagram indicates the hypothetical common ancestor of the taxa represented on the tree. An unrooted tree diagram (a network) makes no assumption about directionality of character state transformation, and does not show the origin or "root" of the taxa in question. In addition to their use for inferring phylogenetic pa ...
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Genetics
Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinians, Augustinian friar working in the 19th century in Brno, was the first to study genetics scientifically. Mendel studied "trait inheritance", patterns in the way traits are handed down from parents to offspring over time. He observed that organisms (pea plants) inherit traits by way of discrete "units of inheritance". This term, still used today, is a somewhat ambiguous definition of what is referred to as a gene. Phenotypic trait, Trait inheritance and Molecular genetics, molecular inheritance mechanisms of genes are still primary principles of genetics in the 21st century, but modern genetics has expanded to study the function and behavior of genes. Gene structure and function, variation, and distribution are studied within the context of the Cell (bi ...
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Geology
Geology (). is a branch of natural science concerned with the Earth and other astronomical objects, the rocks of which they are composed, and the processes by which they change over time. Modern geology significantly overlaps all other Earth sciences, including hydrology. It is integrated with Earth system science and planetary science. Geology describes the structure of the Earth on and beneath its surface and the processes that have shaped that structure. Geologists study the mineralogical composition of rocks in order to get insight into their history of formation. Geology determines the relative ages of rocks found at a given location; geochemistry (a branch of geology) determines their absolute ages. By combining various petrological, crystallographic, and paleontological tools, geologists are able to chronicle the geological history of the Earth as a whole. One aspect is to demonstrate the age of the Earth. Geology provides evidence for plate tectonics, the ev ...
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Crayfish
Crayfish are freshwater crustaceans belonging to the infraorder Astacidea, which also contains lobsters. Taxonomically, they are members of the superfamilies Astacoidea and Parastacoidea. They breathe through feather-like gills. Some species are found in brooks and streams, where fresh water is running, while others thrive in swamps, ditches, and paddy fields. Most crayfish cannot tolerate polluted water, although some species, such as '' Procambarus clarkii'', are hardier. Crayfish feed on animals and plants, either living or decomposing, and detritus. The term "crayfish" is applied to saltwater species in some countries. Terminology The name "crayfish" comes from the Old French word ' ( Modern French '). The word has been modified to "crayfish" by association with "fish" ( French language">Modern French '). The word has been modified to "crayfish" by association with "fish" ( American variant "crawfish" is similarly derived. Some kinds of crayfish are known lo ...
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Evolutionary Significant Unit
An evolutionarily significant unit (ESU) is a population of organisms that is considered distinct for purposes of conservation. Delineating ESUs is important when considering conservation action. An ESU is not always equivalent to a biological species but can be also a subspecies, variety, geographic race, or population. In marine animals the term "stock" is often used as well. Definition Definitions of an ESU generally include at least one of the following criteria:Jeffrey Conner, Daniel Hartl. ''A Primer of Ecological Genetics''. 2004, # Current geographic separation, # Genetic differentiation at neutral markers among related ESUs caused by past restriction of gene flow, or # Locally adapted phenotypic traits caused by differences in selection. Criterion 2 considers the gene flow between populations, measured by FST. A high degree of differentiation between two populations among genes that provide no adaptive advantage to either population (known as ''neutral markers'') i ...
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Tropical Rainforest
Tropical rainforests are dense and warm rainforests with high rainfall typically found between 10° north and south of the Equator. They are a subset of the tropical forest biome that occurs roughly within the 28° latitudes (in the torrid zone between the Tropic of Cancer and Tropic of Capricorn). Tropical rainforests are a type of tropical moist broadleaf forest, that includes the more extensive seasonal tropical forests. True rainforests usually occur in tropical rainforest climates where no dry season occurs; all months have an average precipitation of at least . Seasonal tropical forests with tropical monsoon climate, tropical monsoon or tropical savanna climate, savanna climates are sometimes included in the broader definition. Tropical rainforests ecosystems are distinguished by their consistent, high temperatures, exceeding monthly, and substantial annual rainfall. The abundant rainfall results in nutrient-poor, leached soils, which profoundly affect the flora and fau ...
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Arid
Aridity is the condition of geographical regions which make up approximately 43% of total global available land area, characterized by low annual precipitation, increased temperatures, and limited water availability.Perez-Aguilar, L. Y., Plata-Rocha, W., Monjardin-Armenta, S. A., Franco-Ochoa, C., & Zambrano-Medina, Y. G. (2021). The Identification and Classification of Arid Zones through Multicriteria Evaluation and Geographic Information Systems—Case Study: Arid Regions of Northwest Mexico. ''ISPRS International Journal of Geo-Information'', ''10''(11), 720. https://doi.org/10.3390/ijgi10110720 These areas tend to fall upon degraded soils, and their health and functioning are key necessities of regulating ecosystems’ atmospheric components. Change over time The distribution of aridity at any time is largely the result of the general circulation of the atmosphere. The latter does change significantly over time through climate change. For example, temperature increase by ...
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Genetics (journal)
''Genetics'' is a monthly scientific journal publishing investigations bearing on heredity, genetics, biochemistry and molecular biology Molecular biology is a branch of biology that seeks to understand the molecule, molecular basis of biological activity in and between Cell (biology), cells, including biomolecule, biomolecular synthesis, modification, mechanisms, and interactio .... Genetics is published by the Genetics Society of America. It has a delayed open access policy, and makes articles available online without a subscription after 12 months have elapsed since first publication. Since 2010, it is published online-only. George Harrison Shull was the founding editor of ''Genetics'' in 1916. Editors-in-Chief References Genetics journals Delayed open access journals English-language journals Academic journals established in 1916 Online-only journals {{genetics-journal-stub ...
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Alan Templeton
Alan R. Templeton is an American geneticist and statistician at Washington University in St. Louis, where he is the Charles Rebstock emeritus professor of biology. From 2010 to 2019, he held positions in the Institute of Evolution and the Department of Evolutionary and Environmental Biology at the University of Haifa. He is known for his work demonstrating the degree of genetic diversity among humans and, in his opinion, the biological unreality of human races. Research In 2002, Templeton published a genetic analysis showing that some gene variants that are present in modern populations existed already in Asia hundreds of thousands of years ago. This meant that even if our male line (Y chromosome) and our female line (mitochondrial DNA) came out of Africa in the last 100,000 years or so, we have inherited other genes from populations that were already outside of Africa. Since this study other studies have been done using much more data (see Phylogeography). According to Templet ...
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Statistical
Statistics (from German language, German: ', "description of a State (polity), state, a country") is the discipline that concerns the collection, organization, analysis, interpretation, and presentation of data. In applying statistics to a scientific, industrial, or social problem, it is conventional to begin with a statistical population or a statistical model to be studied. Populations can be diverse groups of people or objects such as "all people living in a country" or "every atom composing a crystal". Statistics deals with every aspect of data, including the planning of data collection in terms of the design of statistical survey, surveys and experimental design, experiments. When census data (comprising every member of the target population) cannot be collected, statisticians collect data by developing specific experiment designs and survey sample (statistics), samples. Representative sampling assures that inferences and conclusions can reasonably extend from the sample ...
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DNA Sequencing
DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, thymine, cytosine, and guanine. The advent of rapid DNA sequencing methods has greatly accelerated biological and medical research and discovery. Knowledge of DNA sequences has become indispensable for basic biological research, Genographic Project, DNA Genographic Projects and in numerous applied fields such as medical diagnosis, biotechnology, forensic biology, virology and biological systematics. Comparing healthy and mutated DNA sequences can diagnose different diseases including various cancers, characterize antibody repertoire, and can be used to guide patient treatment. Having a quick way to sequence DNA allows for faster and more individualized medical care to be administered, and for more organisms to be identified and cataloged. The rapid advancements in DNA seque ...
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