Sphingomonas Flava
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Sphingomonas Flava
''Sphingomonas flava'' is a Gram-negative, strictly aerobic, rod-shaped and non-motile bacteria from the genus of Sphingomonas which has been isolated from soil from Yongin-si from the Gyeonggi Province in Korea Korea is a peninsular region in East Asia consisting of the Korean Peninsula, Jeju Island, and smaller islands. Since the end of World War II in 1945, it has been politically Division of Korea, divided at or near the 38th parallel north, 3 .... References Further reading * flava Bacteria described in 2015 {{Sphingomonadales-stub ...
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Bacteria
Bacteria (; : bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of Prokaryote, prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit the air, soil, water, Hot spring, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria play a vital role in many stages of the nutrient cycle by recycling nutrients and the nitrogen fixation, fixation of nitrogen from the Earth's atmosphere, atmosphere. The nutrient cycle includes the decomposition of cadaver, dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, suc ...
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Pseudomonadota
Pseudomonadota (synonym "Proteobacteria") is a major phylum of gram-negative bacteria. Currently, they are considered the predominant phylum within the domain of bacteria. They are naturally found as pathogenic and free-living (non- parasitic) genera. The phylum comprises six classes ''Acidithiobacillia, Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Hydrogenophilia'', and '' Zetaproteobacteria.'' The Pseudomonadota are widely diverse, with differences in morphology, metabolic processes, relevance to humans, and ecological influence. Classification American microbiologist Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". The group was later formally named the 'Proteobacteria' after the Greek god Proteus, who was known to assume many forms. In 2021 the International Committee on Systematics of Prokaryotes designated the synonym Pseudomonadota, and renamed many other prokaryotic phyla as well. Th ...
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Alphaproteobacteria
''Alphaproteobacteria'' or ''α-proteobacteria'', also called ''α-Purple bacteria'' in earlier literature, is a class of bacteria in the phylum '' Pseudomonadota'' (formerly "Proteobacteria"). The '' Magnetococcales'' and '' Mariprofundales'' are considered basal or sister to the ''Alphaproteobacteria''. The ''Alphaproteobacteria'' are highly diverse and possess few commonalities, but nevertheless share a common ancestor. Like all ''Proteobacteria'', its members are gram-negative, although some of its intracellular parasitic members lack peptidoglycan and are consequently gram variable. Characteristics The ''Alphaproteobacteria'' are a diverse taxon and comprise several phototrophic genera, several genera metabolising C1-compounds (e.g. ''Methylobacterium'' spp.), symbionts of plants (e.g. '' Rhizobium'' spp.), endosymbionts of arthropods ('' Wolbachia'') and intracellular pathogens (e.g. '' Rickettsia''). Moreover, the class is sister to the protomitochondrion, the bacterium ...
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Sphingomonadales
The ''Sphingomonadales'' are an order of the Alphaproteobacteria. Phylogeny The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclatu ... and the phylogeny is based on whole-genome sequences. References Sphingomonadales Bacteria orders Alphaproteobacteria Taxa described in 2006 {{Alphaproteobacteria-stub ...
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Sphingomonadaceae
Sphingomonadaceae are a gram-negative bacterial family of the Alphaproteobacteria. An important feature is the presence of sphingolipids (mainly 2′-hydroxymyristoyl dihydrosphingosine 1-glucuronic acid, "SGL-1") in the outer membrane of the cell wall. The cells are ovoid or rod-shaped. Others are also pleomorphic, i.e. the cells change the shape over time. Some species from Sphingomonadaceae family are dominant components of biofilms. Energy source While most species within Sphingomonadaceae family are heterotrophic, some are phototrophic. Function Some species of Sphingomonadaceae are known to degrade some aromatic compounds. This makes the bacteria of interest to environmental remediation. The diverse metabolic capacity of genera within the ''Sphingomonadaceae'' family, such as '' Sphingobium'', ''Novosphingobium'', and '' Sphingopyxis'' enable these genera to adapt to and be abundant in the presence of bisphenol A. A microbial community with abundant ''Sphingomonadacea ...
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Sphingomonas
''Sphingomonas'' was defined in 1990 as a group of Gram-negative, rod-shaped, chemoheterotrophic, strictly Aerobic organism, aerobic bacteria. They possess ubiquinone 10 as their major Electron transport chain#Quinone carriers, respiratory quinone, contain glycosphingolipids (GSLs), specifically ceramide, instead of lipopolysaccharide (LPS) in their cell envelopes, and typically produce yellow-pigmented colonies. The GSL serves to protect the bacteria from Antibiotic, antibacterial substances. Unlike most Gram-negative bacteria, ''Sphingomonas'' cannot carry endotoxins due to the lack of lipopolysaccharides, and has a Hydrophobe, hydrophobic surface characterized by the short nature of the GSL's carbohydrate portion. By 2001, the genus included more than 20 species that were quite diverse in terms of their phylogenetic, ecological, and physiological properties. As a result, ''Sphingomonas'' was subdivided into different genera: ''Sphingomonas'', ''Sphingobium'', ''Novosphingobium' ...
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Gram-negative
Gram-negative bacteria are bacteria that, unlike gram-positive bacteria, do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. Their defining characteristic is that their cell envelope consists of a thin peptidoglycan cell wall sandwiched between an inner ( cytoplasmic) membrane and an outer membrane. These bacteria are found in all environments that support life on Earth. Within this category, notable species include the model organism '' Escherichia coli'', along with various pathogenic bacteria, such as '' Pseudomonas aeruginosa'', '' Chlamydia trachomatis'', and '' Yersinia pestis''. They pose significant challenges in the medical field due to their outer membrane, which acts as a protective barrier against numerous antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and the antimicrobial enzyme lysozyme produced by animals as part of their innate immune system. Furthe ...
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Aerobic Organism
An aerobic organism or aerobe is an organism that can survive and grow in an oxygenated environment. The ability to exhibit aerobic respiration may yield benefits to the aerobic organism, as aerobic respiration yields more energy than anaerobic respiration. Energy production of the cell involves the synthesis of ATP by an enzyme called ATP synthase. In aerobic respiration, ATP synthase is coupled with an electron transport chain in which oxygen acts as a terminal electron acceptor. In July 2020, marine biologists reported that aerobic microorganisms (mainly), in " quasi-suspended animation", were found in organically poor sediments, up to 101.5 million years old, 250 feet below the seafloor in the South Pacific Gyre (SPG) ("the deadest spot in the ocean"), and could be the longest-living life forms ever found. Types * Obligate aerobes need oxygen to grow. In a process known as cellular respiration, these organisms use oxygen to oxidize substrates (for example sugars and ...
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Rod-shaped
Bacterial cellular morphologies are the shapes that are characteristic of various types of bacteria and often key to their identification. Their direct examination under a light microscope enables the classification of these bacteria (and archaea). Generally, the basic morphologies are spheres (coccus) and round-ended cylinders or rod shaped (bacillus). But, there are also other morphologies such as helically twisted cylinders (example '' Spirochetes''), cylinders curved in one plane (selenomonads) and unusual morphologies (the square, flat box-shaped cells of the Archaean genus '' Haloquadratum)''. Other arrangements include pairs, tetrads, clusters, chains and palisades. Types Coccus A coccus (plural ''cocci'', from the Latin ''coccinus'' (scarlet) and derived from the Greek ''kokkos'' (berry)), is any microorganism (usually bacteria) whose overall shape is spherical or nearly spherical. Coccus refers to the shape of the bacteria and can contain multiple genera, such as s ...
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Non-motile Bacteria
Non-motile bacteria are bacteria species that lack the ability and structures that would allow them to propel themselves, under their own power, through their environment. When non-motile bacteria are cultured in a stab tube, they only grow along the stab line. If the bacteria are mobile, the line will appear diffuse and extend into the medium. The cell structures that provide the ability for locomotion are the cilia and flagella. Coliform and Streptococci are examples of non-motile bacteria as are ''Klebsiella pneumoniae'', and ''Yersinia pestis''. Motility is one characteristic used in the identification of bacteria and evidence of possessing structures: peritrichous flagella, polar flagella and/or a combination of both. Though the lack of motility might be regarded a disadvantage, some non-motile bacteria possess structures that allow their attachment to eukaryotic cells The eukaryotes ( ) constitute the domain of Eukaryota or Eukarya, organisms whose cells have a ...
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Yongin-si
Yongin (; ) is a city in the Seoul Metropolitan Area, the largest in Gyeonggi Province, South Korea. With a population over 1 million, the city has developed rapidly since the 21st century, recording the highest population growth of any city in the country. Yongin is a multi-nuclear city with multiple urban centers, not a single nuclear structure, and Giheung District crosses the Yeongdong Expressway and Dongbaek, while Suji District crosses Pungdeokcheon Stream and Jukjeon. Yongin is a city almost as large as Seoul by area, consisting of the highly urbanized districts of Suji District and Giheung District and the semi-urbanized district of Cheoin District. Yongin's urbanized districts are located close to the capital and many commute to and from downtown Seoul in approximately 30–40 minutes by car using the Gyeongbu Expressway or Yongin-Seoul Expressway, the Bundang Line subway, the Shinbundang Line subway or metropolitan buses. The Shinbundang Line with a maximum speed of exte ...
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Gyeonggi Province
Gyeonggi Province (, ) is the most populous province in South Korea. Seoul, the nation's largest city and capital, is in the heart of the area but has been separately administered as a provincial-level ''special city'' since 1946. Incheon, the nation's third-largest city, is on the coast of the province and has been similarly administered as a provincial-level ''metropolitan city'' since 1981. The three jurisdictions are collectively referred to as '' Sudogwon'' and cover , with a combined population of over 26 million - amounting to over half (50.25%) of the entire population of South Korea, and a third of the population of the Korean peninsula at the 2020 census. Etymology Its name, ''Gyeonggi'', means "京 (the capital) and 畿 (the surrounding area)". Thus, ''Gyeonggi Province'' can be translated as "Seoul and the surrounding areas of Seoul". History Gyeonggi Province has been a politically important area since 18 BCE, when Korea was divided into three nations durin ...
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