Tissue typing
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Tissue typing is a procedure in which the tissues of a prospective donor and recipient are tested for compatibility prior to transplantation. Mismatched donor and recipient tissues can lead to rejection of the tissues. There are multiple methods of tissue typing.


Overview

During tissue typing, an individual's
human leukocyte antigen The human leukocyte antigen (HLA) system or complex is a complex of genes on chromosome 6 in humans which encode cell-surface proteins responsible for the regulation of the immune system. The HLA system is also known as the human version of th ...
s (HLA) are identified. HLA molecules are presented on the surface of cells and facilitate interactions between immune cells (such as
dendritic cell Dendritic cells (DCs) are antigen-presenting cells (also known as ''accessory cells'') of the mammalian immune system. Their main function is to process antigen material and present it on the cell surface to the T cells of the immune system. Th ...
s and
T cell A T cell is a type of lymphocyte. T cells are one of the important white blood cells of the immune system and play a central role in the adaptive immune response. T cells can be distinguished from other lymphocytes by the presence of a T-cell r ...
s) that lead to adaptive immune responses. If HLA from the donor is recognized by the recipient's immune system as different from the recipient's own HLA, an immune response against the donor tissues can be triggered. More specifically, HLA mismatches between organ donors and recipients can lead to the development of anti-HLA donor-specific antibodies (DSAs). DSAs are strongly associated with the rejection of donor tissues in the recipient, and their presence is considered an indicator of antibody-mediated rejection. When donor and recipient HLA are matched, donor tissues are significantly more likely to be accepted by the recipient's immune system. During tissue typing, a number of HLA genes should be typed in both the donor and recipient, including HLA Class I ''A'', ''B'', and ''C'' genes, as well as HLA Class II ''DRB1'', ''DRB3'', ''DRB4'', ''DRB5'', ''DQA1'', ''DQB1'', ''DPA1'', and ''DPB1'' genes. HLA typing is made more difficult by the fact that the HLA region is the most genetically variable region in the human genome.


Methods of tissue typing

One of the first methods of tissue typing was through serological typing. In this technique, a donor's blood cells are HLA typed by mixing them with
serum Serum may refer to: * Serum (blood), plasma from which the clotting proteins have been removed **Antiserum, blood serum with specific antibodies for passive immunity * Serous fluid, any clear bodily fluid *Truth serum, a drug that is likely to mak ...
containing anti-HLA
antibodies An antibody (Ab), also known as an immunoglobulin (Ig), is a large, Y-shaped protein used by the immune system to identify and neutralize foreign objects such as pathogenic bacteria and viruses. The antibody recognizes a unique molecule of ...
. If the antibodies recognize their epitope on the donor's HLA then complement activation occurs leads to cell
lysis Lysis ( ) is the breaking down of the membrane of a cell, often by viral, enzymic, or osmotic (that is, "lytic" ) mechanisms that compromise its integrity. A fluid containing the contents of lysed cells is called a ''lysate''. In molecular b ...
and death, allowing the cells to take up a dye ( trypan blue). This allows for identification of the cells' HLA based indirectly on the specificity of the known antibodies in the serum. This method has been used widely since it is simple, quick, and low-cost; however, the huge variability in HLA
allele An allele (, ; ; modern formation from Greek ἄλλος ''állos'', "other") is a variation of the same sequence of nucleotides at the same place on a long DNA molecule, as described in leading textbooks on genetics and evolution. ::"The chrom ...
s means that serum containing antibodies specific to the HLA of the cells being tested may not be available. Serological typing does not give a clear picture of the HLA region and does not always result in successful HLA typing, so many laboratories have stopped using it in favor of more effective methods. Recently, other more effective approaches have emerged, including the use of polymerase chain reaction ( PCR) based on sequence-specific primers (SSP) or sequence-specific oligonucleotide probes (SSOP). However, SSP-PCR can be both time and resource consuming. SSOP-PCR is better for HLA typing large numbers of individuals, for example, large numbers of donors for bone marrow registries.
RT-PCR Reverse transcription polymerase chain reaction (RT-PCR) is a laboratory technique combining reverse transcription of RNA into DNA (in this context called complementary DNA or cDNA) and amplification of specific DNA targets using polymerase chai ...
is another approach to HLA typing that is fast and versatile, but it is expensive. Reference strand-mediated conformational analysis (RSCA) is yet another method used for HLA typing. In this method, an unknown HLA sample is mixed with a reference allele and run in a gel by
electrophoresis Electrophoresis, from Ancient Greek ἤλεκτρον (ḗlektron, "amber") and φόρησις (phórēsis, "the act of bearing"), is the motion of dispersed particles relative to a fluid under the influence of a spatially uniform electric fi ...
. RSCA is limited by the number of HLA reference alleles available since the HLA region is so diverse. Direct
DNA sequencing DNA sequencing is the process of determining the nucleic acid sequence – the order of nucleotides in DNA. It includes any method or technology that is used to determine the order of the four bases: adenine, guanine, cytosine, and thymine. T ...
is currently considered the best method of HLA typing, either by
Sanger sequencing Sanger sequencing is a method of DNA sequencing that involves electrophoresis and is based on the random incorporation of chain-terminating dideoxynucleotides by DNA polymerase during in vitro DNA replication. After first being developed by Fred ...
or next generation sequencing, though it can also be time-consuming and is one of the more expensive methods.
RNA sequencing RNA-Seq (named as an abbreviation of RNA sequencing) is a sequencing technique which uses next-generation sequencing (NGS) to reveal the presence and quantity of RNA in a biological sample at a given moment, analyzing the continuously changing c ...
can also be used, but many labs do not as RNA is unstable and prone to degradation.


See also

* Graft-versus-host disease * Histocompatibility


References


External links


How Preimplantation tissue typing works, HFEA website
* {{MeshName, Tissue+typing

Medical tests Transplantation medicine Immunology