Scorpionate ligand
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In
coordination chemistry A coordination complex consists of a central atom or ion, which is usually metallic and is called the ''coordination centre'', and a surrounding array of bound molecules or ions, that are in turn known as ''ligands'' or complexing agents. Many ...
, the term scorpionate ligand refers to a tridentate (three-donor-site)
ligand In coordination chemistry, a ligand is an ion or molecule (functional group) that binds to a central metal atom to form a coordination complex. The bonding with the metal generally involves formal donation of one or more of the ligand's electr ...
which would bind to a metal in a ''fac'' manner. The most popular class of scorpionates are the hydrotris(pyrazolyl)borates or Tp ligands. These were also the first to become popular. These ligands first appeared in journals in 1966 from the then little-known
DuPont DuPont de Nemours, Inc., commonly shortened to DuPont, is an American multinational chemical company first formed in 1802 by French-American chemist and industrialist Éleuthère Irénée du Pont de Nemours. The company played a major role in ...
chemist of Ukrainian descent, Swiatoslaw Trofimenko. Trofimenko called this discovery "a new and fertile field of remarkable scope". The term scorpionate comes from the fact that the ligand can bind a metal with two donor sites like the pincers of a
scorpion Scorpions are predatory arachnids of the order Scorpiones. They have eight legs, and are easily recognized by a pair of grasping pincers and a narrow, segmented tail, often carried in a characteristic forward curve over the back and always end ...
; the third and final donor site reaches over the plane formed by the metal and the other two donor atoms to bind to the metal. The binding can be thought of as being like a scorpion grabbing the metal with two pincers before stinging it. While many scorpionate ligands are of the Tp class, many other scorpionate ligands are known. For example, the Tm and tripodal phosphine classes have an equally good claim to be scorpionate ligands. Many of the scorpionate ligands have a central
boron Boron is a chemical element with the symbol B and atomic number 5. In its crystalline form it is a brittle, dark, lustrous metalloid; in its amorphous form it is a brown powder. As the lightest element of the ''boron group'' it has th ...
atom which bears a total of four groups, but it is possible to create ligands which use other central atoms.


Homoscorpionates vs. Heteroscorpionates

Trofimenko's initial work in the field was with the homoscorpionates where three pyrazolyl groups are attached to a
boron Boron is a chemical element with the symbol B and atomic number 5. In its crystalline form it is a brittle, dark, lustrous metalloid; in its amorphous form it is a brown powder. As the lightest element of the ''boron group'' it has th ...
. Since this work a range of ligands have been reported where more than one type of metal binding group is attached to the central atom; these are the heteroscorpionates. Many other chemists continue to explore the possibilities of scorpionate ligand alternatives, such as: *utilizing
pyrrole Pyrrole is a heterocyclic aromatic organic compound, a five-membered ring with the formula C4 H4 NH. It is a colorless volatile liquid that darkens readily upon exposure to air. Substituted derivatives are also called pyrroles, e.g., ''N''-meth ...
,
imidazole Imidazole (ImH) is an organic compound with the formula C3N2H4. It is a white or colourless solid that is soluble in water, producing a mildly alkaline solution. In chemistry, it is an aromatic heterocycle, classified as a diazole Diazole refers ...
, or
indole Indole is an aromatic heterocyclic organic compound with the formula C8 H7 N. It has a bicyclic structure, consisting of a six-membered benzene ring fused to a five-membered pyrrole ring. Indole is widely distributed in the natural environmen ...
compounds in place of the pyrazole rings²; *the possibility of
tripod A tripod is a portable three-legged frame or stand, used as a platform for supporting the weight and maintaining the stability of some other object. The three-legged (triangular stance) design provides good stability against gravitational loads ...
al heptadentate ligands such as N4O3 from the ligand tris -((2-N,N-diethylcarbamoyl)pyridyl)methylmine³; *Sulfur donor groups such as those found in the Tm ligand or oxygen donor groups. *changing the ligands to alter the type of
molecular encapsulation In supramolecular chemistry, molecular encapsulation is the confinement of a guest molecule inside the cavity of a supramolecular host molecule (molecular capsule, molecular container or cage compounds). Examples of supramolecular host molecule ...
needed to metals; *for very different applications, "heteroscorpionate ligands" have been examined of hybrid scorpionate/
cyclopentadienyl Cyclopentadienyl can refer to *Cyclopentadienyl anion, or cyclopentadienide, **Cyclopentadienyl ligand *Cyclopentadienyl radical, • *Cyclopentadienyl cation, See also *Pentadienyl In organic chemistry, pentadienyl refers to the organic radic ...
-lithium compounds such as i(2,2-bis(3,5-dimethyl pyrazol-1-yl)1,1-diphenylethylcyclopentadienyl(THF)which catalyzes olefin polymerization.


Isolobality

Since the work by
Wilkinson Wilkinson may refer to: People * Wilkinson (surname), a surname (including a list of people with the name) Places in the United States * Wilkinson, Illinois * Wilkinson, Indiana, a town in Hancock County * Wilkinson, Minnesota * Wilkinson, Mis ...
and others on
ferrocene Ferrocene is an organometallic compound with the formula . The molecule is a complex consisting of two cyclopentadienyl rings bound to a central iron atom. It is an orange solid with a camphor-like odor, that sublimes above room temperature, a ...
a vast amount of work has been done on
cyclopentadienyl Cyclopentadienyl can refer to *Cyclopentadienyl anion, or cyclopentadienide, **Cyclopentadienyl ligand *Cyclopentadienyl radical, • *Cyclopentadienyl cation, See also *Pentadienyl In organic chemistry, pentadienyl refers to the organic radic ...
complexes. It was soon understood by many organometallic chemists that a Cp ligand is isolobal to Tp. As many insights into chemistry can be obtained by the study of a series of closely related compounds (where only one feature is changed) a great deal of organometallic chemistry has been done using Tp (and more recently Tm) as a co-ligand on the metal. The Tp, Tm, trithia-9-crown-3 (a
sulfur Sulfur (or sulphur in British English) is a chemical element with the symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms form cyclic octatomic molecules with a chemical formula ...
version of a small
crown ether In organic chemistry, crown ethers are cyclic chemical compounds that consist of a ring containing several ether groups (). The most common crown ethers are cyclic oligomers of ethylene oxide, the repeating unit being ethyleneoxy, i.e., . Impor ...
) and
cyclopentadienyl Cyclopentadienyl can refer to *Cyclopentadienyl anion, or cyclopentadienide, **Cyclopentadienyl ligand *Cyclopentadienyl radical, • *Cyclopentadienyl cation, See also *Pentadienyl In organic chemistry, pentadienyl refers to the organic radic ...
(Cp) ligands related ligands and form related complexes. These ligands donate the same number of electrons to the metal, and the donor atoms are arranged in a ''fac'' manner covering a
face The face is the front of an animal's head that features the eyes, nose and mouth, and through which animals express many of their emotions. The face is crucial for human identity, and damage such as scarring or developmental deformities may aff ...
of a
polyhedron In geometry, a polyhedron (plural polyhedra or polyhedrons; ) is a three-dimensional shape with flat polygonal faces, straight edges and sharp corners or vertices. A convex polyhedron is the convex hull of finitely many points, not all on th ...
. The Tp and Tm ligands are
isolobal In organometallic chemistry, the isolobal principle (more formally known as the isolobal analogy) is a strategy used to relate the structure of organic and inorganic molecular fragments in order to predict bonding properties of organometallic comp ...
with the Cp ligands. For example, the Cp
manganese Manganese is a chemical element with the symbol Mn and atomic number 25. It is a hard, brittle, silvery metal, often found in minerals in combination with iron. Manganese is a transition metal with a multifaceted array of industrial alloy use ...
tricarbonyl complex is a
half sandwich compound Half sandwich compounds, also known as piano stool complexes, are organometallic complexes that feature a cyclic polyhapto ligand bound to an MLn center, where L is a unidentate ligand. Thousands of such complexes are known. Well-known examples i ...
, with one face of the Cp ligand binding to the metal atom. The tricarbonyl manganese complex of trithia-9-crown-3 has the three sulfur atoms binding to the metal atom in the same place as the Cp ligand and using the same sort of orbitals for the bonding. While the geometry of the Tp ligands do not allow the formation of simple
borane Trihydridoboron, also known as borane or borine, is an unstable and highly reactive molecule with the chemical formula . The preparation of borane carbonyl, BH3(CO), played an important role in exploring the chemistry of boranes, as it indicated ...
complexes with the metals, the geometry of the Tm ligands (and sometimes their bidentate versions Bm) are such that with late
transition metal In chemistry, a transition metal (or transition element) is a chemical element in the d-block of the periodic table (groups 3 to 12), though the elements of group 12 (and less often group 3) are sometimes excluded. They are the elements that can ...
s such as osmium and
platinum Platinum is a chemical element with the symbol Pt and atomic number 78. It is a dense, malleable, ductile, highly unreactive, precious, silverish-white transition metal. Its name originates from Spanish , a diminutive of "silver". Platinu ...
it is possible to turn the Tm ligand inside out to form a borane to which the metal forms a
dative bond In coordination chemistry, a coordinate covalent bond, also known as a dative bond, dipolar bond, or coordinate bond is a kind of two-center, two-electron covalent bond in which the two electrons derive from the same atom. The bonding of metal io ...
. Here is the manganese complex of Tm with (''again three carbonyls'').


Tp class

The tris(pyrazolyl)borate ligand is often known as Tp to many inorganic chemists - using different pyrazoles substituted in the 3,4, and 5 positions, a range of different ligands can be formed. In this article we will group all the trispyrazolylborates together. These compounds are usually synthesized by reacting pyrazole with alkali-metal borohydrides, such as
sodium borohydride Sodium borohydride, also known as sodium tetrahydridoborate and sodium tetrahydroborate, is an inorganic compound with the formula Na BH4. This white solid, usually encountered as an aqueous basic solution, is a reducing agent that finds appli ...
NaBH4, under reflux. H2 is evolved as the borohydride is sequentially converted first to pyrazolylborate 3B(C3N2H3) then to bis(pyrazolyl)borate 2B(C3N2H3)2 and finally to tris(pyrazolyl)borate B(C3N2H3)3 Bulky pyrazolyl borates can be prepared from 3,5-disubstituted pyrazoles, such as the dimethyl derivative. These bulky pyrazolyl borates have proven especially valuable in the preparation of catalysts and models for enzyme active sites. Utilizing scorpionate ligands in the syntheses of metal catalysts may allow simpler and more accurate methods to be developed.
Ligand In coordination chemistry, a ligand is an ion or molecule (functional group) that binds to a central metal atom to form a coordination complex. The bonding with the metal generally involves formal donation of one or more of the ligand's electr ...
s allow for good shielding of the bound metal while strong
sigma bond In chemistry, sigma bonds (σ bonds) are the strongest type of covalent chemical bond. They are formed by head-on overlapping between atomic orbitals. Sigma bonding is most simply defined for diatomic molecules using the language and tools of s ...
s between the nitrogens and the metal stabilize the metal; these attributes help scorpionate compounds with creating highly symmetrical
supramolecular Supramolecular chemistry refers to the branch of chemistry concerning chemical systems composed of a discrete number of molecules. The strength of the forces responsible for spatial organization of the system range from weak intermolecular forces, ...
silver complexes and
olefin In organic chemistry, an alkene is a hydrocarbon containing a carbon–carbon double bond. Alkene is often used as synonym of olefin, that is, any hydrocarbon containing one or more double bonds.H. Stephen Stoker (2015): General, Organic, an ...
polymerization In polymer chemistry, polymerization (American English), or polymerisation (British English), is a process of reacting monomer, monomer molecules together in a chemical reaction to form polymer chains or three-dimensional networks. There are ...
(with the compound hydrotris(pyrazolyl) borate Mn).


Tm class

By replacing the nitrogen donor of a Tp ligand atoms with
sulfur Sulfur (or sulphur in British English) is a chemical element with the symbol S and atomic number 16. It is abundant, multivalent and nonmetallic. Under normal conditions, sulfur atoms form cyclic octatomic molecules with a chemical formula ...
atoms, a class of ligands known as ''Tm'' can be made. These are related to the
thiourea Thiourea () is an organosulfur compound with the formula and the structure . It is structurally similar to urea (), except that the oxygen atom is replaced by a sulfur atom (as implied by the ''thio-'' prefix); however, the properties of urea ...
s.¹; Several research groups including Anthony F. Hill's group have been working on this ligand class. To form NaTm {Na+ HB(mt)3),
Methimazole Thiamazole, also known as methimazole, is a medication used to treat hyperthyroidism. This includes Graves disease, toxic multinodular goiter, and thyrotoxic crisis. It is taken by mouth. Full effects may take a few weeks to occur. Common s ...
and sodium borohydride are heated together. Coordination chemistry with
ruthenium Ruthenium is a chemical element with the Symbol (chemistry), symbol Ru and atomic number 44. It is a rare transition metal belonging to the platinum group of the periodic table. Like the other metals of the platinum group, ruthenium is inert to ...
,
rhodium Rhodium is a chemical element with the symbol Rh and atomic number 45. It is a very rare, silvery-white, hard, corrosion-resistant transition metal. It is a noble metal and a member of the platinum group. It has only one naturally occurring isoto ...
,
osmium Osmium (from Greek grc, ὀσμή, osme, smell, label=none) is a chemical element with the symbol Os and atomic number 76. It is a hard, brittle, bluish-white transition metal in the platinum group that is found as a trace element in alloys, mos ...
,
molybdenum Molybdenum is a chemical element with the symbol Mo and atomic number 42 which is located in period 5 and group 6. The name is from Neo-Latin ''molybdaenum'', which is based on Ancient Greek ', meaning lead, since its ores were confused with lea ...
,
tungsten Tungsten, or wolfram, is a chemical element with the symbol W and atomic number 74. Tungsten is a rare metal found naturally on Earth almost exclusively as compounds with other elements. It was identified as a new element in 1781 and first isolat ...
, and other metals has been reported.


Other

A range of
tripod A tripod is a portable three-legged frame or stand, used as a platform for supporting the weight and maintaining the stability of some other object. The three-legged (triangular stance) design provides good stability against gravitational loads ...
al
phosphine Phosphine (IUPAC name: phosphane) is a colorless, flammable, highly toxic compound with the chemical formula , classed as a pnictogen hydride. Pure phosphine is odorless, but technical grade samples have a highly unpleasant odor like rotting ...
s such as HC(CH2PR2)3, N(CH2CH2PPh2)3 and P(CH2CH2PMe2)3 have been reviewed. The tetra amine ( ''tris''-(2-aminoethyl) amine) can be reacted with
salicylaldehyde Salicylic aldehyde (2-hydroxybenzaldehyde) is the organic compound with the formula (C7 H6 O2) C6H4CHO-2-OH. Along with 3-hydroxybenzaldehyde and 4-hydroxybenzaldehyde, it is one of the three isomers of hydroxybenzaldehyde. This colorless oil ...
to form a ligand which can bind with three oxygens and three nitrogens to a metal. Trispyrazolylmethane (Tpm) is another class of scorpionate ligands, notable for having identical geometry and very similar coordination chemistry to Tp with only a difference in charge between them. Another variation is the Trisoxazolinylborate ligand. Hydrotris(pyrazolyl)aluminate (Tpa) complexes have similar coordination geometries to Tp complexes, however Tpa ligands are more reactive due to the weaker Al-N and Al-H bonds, compared to B-N and B-H bonds of Tp ligands, which results in either Tpa ligand transfer, pyrazolate transfer, or hydride transfer with MX2 (M = Mg, Mn, Fe, Co, Ni, Cu, Zn; X = Cl, Br).


See also

* Pincer ligands


References


Further reading

;Examples of Scorpionate ligands #
Inorganic Chemistry Inorganic chemistry deals with synthesis and behavior of inorganic and organometallic compounds. This field covers chemical compounds that are not carbon-based, which are the subjects of organic chemistry. The distinction between the two disci ...
, 43(24), 7800–7806. #
Inorganic Chemistry Inorganic chemistry deals with synthesis and behavior of inorganic and organometallic compounds. This field covers chemical compounds that are not carbon-based, which are the subjects of organic chemistry. The distinction between the two disci ...
, 43(26), 8212-8214. #
Chemical Reviews ''Chemical Reviews'' is peer-reviewed scientific journal published twice per month by the American Chemical Society. It publishes review articles on all aspects of chemistry. It was established in 1924 by William Albert Noyes (University of Illinoi ...
, 102, 1851-1896. #
Inorganic Chemistry Inorganic chemistry deals with synthesis and behavior of inorganic and organometallic compounds. This field covers chemical compounds that are not carbon-based, which are the subjects of organic chemistry. The distinction between the two disci ...
, 42(24), 7978-7989. #
Journal of the American Chemical Society The ''Journal of the American Chemical Society'' is a weekly peer-reviewed scientific journal that was established in 1879 by the American Chemical Society. The journal has absorbed two other publications in its history, the ''Journal of Analytical ...
, 126, 1330-1331. #
Inorganic Chemistry Inorganic chemistry deals with synthesis and behavior of inorganic and organometallic compounds. This field covers chemical compounds that are not carbon-based, which are the subjects of organic chemistry. The distinction between the two disci ...
, 44(4), 846-848. #
Organometallics ''Organometallics'' is a biweekly journal published by the American Chemical Society. Its area of focus is organometallic and organometalloid chemistry. This peer-reviewed journal has an impact factor of 3.837 as reported by the 2021 Journal Citat ...
, 23, 1200-1202. #
Acta Crystallographica Section C ''Acta Crystallographica'' is a series of peer-reviewed scientific journals, with articles centred on crystallography, published by the International Union of Crystallography (IUCr). Originally established in 1948 as a single journal called ''Acta ...
, 69, part 9 (2013) special issue on scorpionates.


External links

*
Chemical & Engineering News ''Chemical & Engineering News'' (''C&EN'') is a weekly news magazine published by the American Chemical Society, providing professional and technical news and analysis in the fields of chemistry and chemical engineering.Pinch and Sting: The Scorpionates
April 28, 2003. {{DEFAULTSORT:Scorpionate Ligand Coordination chemistry Tripodal ligands