This is a list of ecoregions in Honduras as defined by the World Wildlife Fund and the Freshwater Ecoregions of the World database.

Terrestrial ecoregions

Tropical and subtropical moist broadleaf forests

* Central American Atlantic moist forests * Central American montane forests

* Central American dry forests

* Central American pine–oak forests * Miskito pine forests

* Gulf of Fonseca mangroves *Mosquitia–Nicaraguan Caribbean Coast mangroves * Northern Honduras mangroves

* Chiapas–Fonseca * Quintana Roo–Motagua * Mosquitia * Estero Real–Tempisque

* Western Caribbean (includes the Mesoamerican Barrier Reef System, Mesoamerican Barrier Reef) * Southwestern Caribbean

* Chiapas-Nicaragua

{{Honduras topics Ecoregions of Honduras, Lists of ecoregions by country, Honduras Honduras geography-related lists, Ecoregions Flora of Honduras, *