Interim Register of Marine and Nonmarine Genera
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The Interim Register of Marine and Nonmarine Genera (IRMNG) is a
taxonomic database A taxonomic database is a database created to hold information on biological taxa – for example groups of organisms organized by species name or other taxonomic identifier – for efficient data management and information retrieval. Taxonomic dat ...
which attempts to cover published genus names for all domains of life from 1758 in zoology (1753 in botany) up to the present, arranged in a single, internally consistent taxonomic hierarchy, for the benefit of
Biodiversity Informatics Biodiversity informatics is the application of informatics techniques to biodiversity information, such as taxonomy, biogeography or ecology. Modern computer techniques can yield new ways to view and analyze existing information, as well as predict ...
initiatives plus general users of biodiversity (taxonomic) information. In addition to containing over 490,000 published genus name instances as at March 2020 (also including subgeneric names in zoology), the database holds over 1.7 million species names (1.3 million listed as "accepted"), although this component of the data is not maintained in as current or complete state as the genus-level holdings. IRMNG can be queried online for access to the latest version of the dataset and is also made available as periodic snapshots or data dumps for import/upload into other systems as desired.


Description

IRMNG contains scientific names (only) of the genera, a subset of
species In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate s ...
, and principal higher ranks of most plants, animals and other
kingdoms Kingdom commonly refers to: * A monarchy ruled by a king or queen * Kingdom (biology), a category in biological taxonomy Kingdom may also refer to: Arts and media Television * ''Kingdom'' (British TV series), a 2007 British television drama s ...
, both living and extinct, within a standardized taxonomic hierarchy, with associated machine-readable information on habitat (e.g. marine/nonmarine) and extant/
fossil A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved ...
status for the majority of entries. The database aspires to provide complete coverage of both accepted and unaccepted genus names across all kingdoms, with a subset only of species names included as a secondary activity. In its March 2020 release, IRMNG contained 492,620 genus names, of which 232,093 were listed as "accepted", 121,389 "unaccepted", 7,462 of "other" status i.e. interim unpublished, ''nomen dubium'', ''nomen nudum'', ''taxon inquirendum'' or temporary name, and 131,676 as "uncertain" (unassessed for taxonomic status at this time). The data originate from a range of (frequently domain-specific) print, online and database sources, including (among others) '' Nomenclator Zoologicus'' for animals and '' Index Nominum Genericorum'' for plants, and are reorganised into a common data structure to support a variety of online queries, generation of individual taxon pages, and bulk data supply to other
biodiversity informatics Biodiversity informatics is the application of informatics techniques to biodiversity information, such as taxonomy, biogeography or ecology. Modern computer techniques can yield new ways to view and analyze existing information, as well as predict ...
projects. IRMNG content can be queried and displayed freely via the web, and download files of the data down to the taxonomic rank of genus as at specific dates are available in the Darwin Core Archive (DwC-A) format. The data include
homonym In linguistics, homonyms are words which are homographs (words that share the same spelling, regardless of pronunciation), or homophones ( equivocal words, that share the same pronunciation, regardless of spelling), or both. Using this definiti ...
s (with their authorities), including both available (validly published) and selected unavailable names. Estimates for "accepted names" as held at March 2020 are as follows, broken down by kingdom: * Animalia: 239,093 accepted genus names (± 55,350) *
Plantae Plants are predominantly photosynthetic eukaryotes of the kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all current definitions of Plantae exclude ...
: 28,724 accepted genus names (± 7,721) *
Fungi A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from ...
: 10,468 accepted genus names (± 182) *
Chromista Chromista is a biological kingdom consisting of single-celled and multicellular eukaryotic species that share similar features in their photosynthetic organelles ( plastids). It includes all protists whose plastids contain chlorophyll ''c'', ...
: 11,114 accepted genus names (± 1,268) * Protozoa: 3,109 accepted genus names (± 1,206) *
Bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one Cell (biology), biological cell. They constitute a large domain (biology), domain of prokaryotic microorganisms. Typically a few micrometr ...
: 3,433 accepted genus names (± 115) * Archaea: 140 accepted genus names (± 0) *
Virus A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsk ...
es: 851 accepted genus names (± 0) The cited ranges of uncertainty arise because IRMNG lists "uncertain" names (not researched therein) in addition to known "accepted" names; the values quoted are the mean of "accepted" names alone (all "uncertain" names treated as unaccepted) and "accepted + uncertain" names (all "uncertain" names treated as accepted), with the associated range of uncertainty indicating these two extremes.


Database location and hosting

IRMNG was initiated and designed by Australian biologist and data manager Tony Rees in 2006. For his work on this and other projects, GBIF awarded him the 2014 Ebbe Nielsen Prize. From 2006 to 2014 IRMNG was located at
CSIRO Marine and Atmospheric Research CSIRO Oceans and Atmosphere (O&A) is one of the current 8 Business Units (formerly: Flagships) of the Commonwealth Scientific and Industrial Research Organisation (CSIRO), Australia's largest government-supported science research agency. Histor ...
, and was moved to the
Flanders Marine Institute The Flanders Marine Institute (Dutch: Vlaams Instituut voor de Zee, VLIZ) provides a focal point for marine scientific research in Flanders, northern Belgium Belgium, ; french: Belgique ; german: Belgien officially the Kingdom of Belgium ...
(VLIZ) over the period 2014–2016; from 2016 onwards all releases have been available via its new website www.irmng.org which is hosted by VLIZ. VLIZ also hosts the
World Register of Marine Species The World Register of Marine Species (WoRMS) is a taxonomic database that aims to provide an authoritative and comprehensive list of names of marine organisms. Content The content of the registry is edited and maintained by scientific specialis ...
(WoRMS), using a common infrastructure.


IRMNG usage

Content from IRMNG is used by several global Biodiversity Informatics projects including
Open Tree of Life The Open Tree of Life is an online phylogenetic tree of life – a collaborative effort, funded by the National Science Foundation. The first draft, including 2.3 million species, was released in September 2015. The Interactive graph allows the u ...
, the
Global Biodiversity Information Facility The Global Biodiversity Information Facility (GBIF) is an international organisation that focuses on making scientific data on biodiversity available via the Internet using web services. The data are provided by many institutions from around the ...
(GBIF), and the
Encyclopedia of Life The ''Encyclopedia of Life'' (''EOL'') is a free, online encyclopedia intended to document all of the 1.9 million living species known to science. It is compiled from existing trusted databases curated by experts and with the assistance of ...
(EOL), in addition to others including the
Atlas of Living Australia The Atlas of Living Australia (ALA) is an online repository of information about Australian plants, animals, and fungi. Development started in 2006. The Commonwealth Scientific and Industrial Research Organisation (CSIRO) is an organisation sig ...
and the Global Names Architecture (GNA)'s ''Global Names Resolver''. From 2018 onwards, IRMNG data are also being used to populate the taxonomic hierarchy and provide generic names for a range of taxa in the areas of protists (kingdoms Protozoa and
Chromista Chromista is a biological kingdom consisting of single-celled and multicellular eukaryotic species that share similar features in their photosynthetic organelles ( plastids). It includes all protists whose plastids contain chlorophyll ''c'', ...
) and plant algae (
Charophyta Charophyta () is a group of freshwater green algae, called charophytes (), sometimes treated as a division, yet also as a superdivision or an unranked clade. The terrestrial plants, the Embryophyta emerged within Charophyta, possibly from terre ...
,
Chlorophyta Chlorophyta or Prasinophyta is a taxon of green algae informally called chlorophytes. The name is used in two very different senses, so care is needed to determine the use by a particular author. In older classification systems, it refers to a ...
,
Glaucophyta The glaucophytes, also known as glaucocystophytes or glaucocystids, are a small group of unicellular algae found in freshwater and moist terrestrial environments, less common today than they were during the Proterozoic. The stated number of speci ...
and Rhodophyta) in the
Catalogue of Life The Catalogue of Life is an online database that provides an index of known species of animals, plants, fungi, and microorganisms. It was created in 2001 as a partnership between the global Species 2000 and the American Integrated Taxonomic I ...
.


References


Further reading

* * *


External links

* {{Official website Taxonomy (biology) Online databases Internet properties established in 2006 Biodiversity databases Online taxonomy databases