Institute for Systems Biology
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Institute for Systems Biology (ISB) is a
non-profit A nonprofit organization (NPO) or non-profit organisation, also known as a non-business entity, not-for-profit organization, or nonprofit institution, is a legal entity organized and operated for a collective, public or social benefit, in co ...
research institution located in
Seattle, Washington Seattle ( ) is a port, seaport city on the West Coast of the United States. It is the county seat, seat of King County, Washington, King County, Washington (state), Washington. With a 2020 population of 737,015, it is the largest city in bo ...
, United States. ISB concentrates on
systems biology Systems biology is the computational modeling, computational and mathematical analysis and modeling of complex biological systems. It is a biology-based interdisciplinary field of study that focuses on complex interactions within biological syst ...
, the study of relationships and interactions between various parts of biological systems, and advocates an
interdisciplinary Interdisciplinarity or interdisciplinary studies involves the combination of multiple academic disciplines into one activity (e.g., a research project). It draws knowledge from several other fields like sociology, anthropology, psychology, ec ...
approach to biological research.


Goals

Systems biology is the study of biological systems in a holistic manner by integrating data at all levels of the biological information hierarchy, from global down to the individual organism, and below down to the molecular level. The vision of ISB is to integrate these concepts using a cross-disciplinary approach combining the efforts of biologists, chemists, computer scientists, engineers, mathematicians, physicists, and physicians. On its website, ISB has defined four areas of focus: * P4 Medicine - This acronym refers to predictive, preventive, personalized and participatory medicine, which focuses on wellness rather than mere treatment of disease. * Global Health - Use of the systems approach towards the study of infectious diseases, vaccine development, emergence of chronic diseases, and maternal and child health. * Sustainable Environment - Applying systems biology for a better understanding of the role of microbes in the environment and their relation to human health. * Education & Outreach - Knowledge transfer to society through a variety of educational programs and partnerships, including the spin out of new companies.


Early history

Leroy Hood Leroy "Lee" Edward Hood (born October 10, 1938) is an American biologist who has served on the faculties at the California Institute of Technology (Caltech) and the University of Washington. Hood has developed ground-breaking scientific instrum ...
co-founded the Institute with
Alan Aderem Alan Aderem is an American biologist, specializing in immunology and cell biology. Aderem's particular focus is the innate immune system, the part of the immune system that responds generically to pathogens. His laboratory's research focuses on ...
and
Ruedi Aebersold Rudolf Aebersold (better known as Ruedi Aebersold born September 12, 1954 ) is a Swiss biologist, regarded as a pioneer in the fields of proteomics and systems biology. He has primarily researched techniques for measuring proteins in complex samp ...
in 2000. However, the story of how ISB got started actually begins in 1990. Lee Hood was the director of a large molecular biotechnology lab at the
California Institute of Technology The California Institute of Technology (branded as Caltech or CIT)The university itself only spells its short form as "Caltech"; the institution considers other spellings such a"Cal Tech" and "CalTech" incorrect. The institute is also occasional ...
in Pasadena, and was a key advisor in the
Human Genome Project The Human Genome Project (HGP) was an international scientific research project with the goal of determining the base pairs that make up human DNA, and of identifying, mapping and sequencing all of the genes of the human genome from both a ...
, having overseen development of machines that were instrumental to its later success. The
University of Washington The University of Washington (UW, simply Washington, or informally U-Dub) is a public research university in Seattle, Washington. Founded in 1861, Washington is one of the oldest universities on the West Coast; it was established in Seattle a ...
(UW), like many other universities, was eager to recruit Hood, but had neither the space nor the money to accommodate Hood's large laboratory. Lee Huntsman, director of University of Washington's Center for Bioengineering, was attending a University of Washington football game, sharing a luxury box with
Bill Gates William Henry Gates III (born October 28, 1955) is an American business magnate and philanthropist. He is a co-founder of Microsoft, along with his late childhood friend Paul Allen. During his career at Microsoft, Gates held the positions ...
, the former CEO and current chairman of
Microsoft Microsoft Corporation is an American multinational technology corporation producing computer software, consumer electronics, personal computers, and related services headquartered at the Microsoft Redmond campus located in Redmond, Washing ...
. Huntsman took the opportunity to tell Gates about Hood. Bill Gates already had a considerable interest in biotechnology, both as a philanthropist and as an investor, and after meeting Hood, donated $12 million to UW to enable him to head a new department of molecular biotechnology, where Hood continues to hold a faculty position as the Gates Professor of Molecular Biotechnology. ISB represents a spin-off of Hood's labs at UW.


Achievements

ISB is in the top ranks of scientific institutions worldwide. In 2012, the SCImago Research Group, based in Spain, ranked ISB 4th worldwide on its Excellence Rate scale. ISB currently hosts 12 research groups with expertise ranging across
genetics Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar wor ...
,
microbial genetics Microbial genetics is a subject area within microbiology and genetic engineering. Microbial genetics studies microorganisms for different purposes. The microorganisms that are observed are bacteria, and archaea. Some fungi and protozoa are also s ...
, complex
molecular machine A molecular machine, nanite, or nanomachine is a molecular component that produces quasi-mechanical movements (output) in response to specific stimuli (input). In cellular biology, macromolecular machines frequently perform tasks essential for l ...
s, macromolecular complexes,
gene regulatory networks A gene (or genetic) regulatory network (GRN) is a collection of molecular regulators that interact with each other and with other substances in the cell to govern the gene expression levels of mRNA and proteins which, in turn, determine the fun ...
,
immunology Immunology is a branch of medicineImmunology for Medical Students, Roderick Nairn, Matthew Helbert, Mosby, 2007 and biology that covers the medical study of immune systems in humans, animals, plants and sapient species. In such we can see there ...
, molecular and cell biology, cancer biology,
genomics Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dim ...
,
proteomics Proteomics is the large-scale study of proteins. Proteins are vital parts of living organisms, with many functions such as the formation of structural fibers of muscle tissue, enzymatic digestion of food, or synthesis and replication of DNA. In ...
, protein chemistry,
computational biology Computational biology refers to the use of data analysis, mathematical modeling and computational simulations to understand biological systems and relationships. An intersection of computer science, biology, and big data, the field also has fo ...
and
biotechnology Biotechnology is the integration of natural sciences and engineering sciences in order to achieve the application of organisms, cells, parts thereof and molecular analogues for products and services. The term ''biotechnology'' was first used b ...
. The ISB website lists 985 peer-reviewed publications for the years 2000 through early 2012. In late 2005, ISB began to emphasize the application of systems biology to P4 medicine (predictive, preventive, personalized, participatory), ''i.e.'' the development of techniques for predicting and preventing disease, possibly before patients even know they are sick. The ''P4 Medicine institute'' was co-founded in 2010 by ISB and
Ohio State University The Ohio State University, commonly called Ohio State or OSU, is a public land-grant research university in Columbus, Ohio. A member of the University System of Ohio, it has been ranked by major institutional rankings among the best publ ...
. The Education and Outreach efforts of ISB include creating the Logan Center for Education whose mission is to enable educators to produce
STEM Stem or STEM may refer to: Plant structures * Plant stem, a plant's aboveground axis, made of vascular tissue, off which leaves and flowers hang * Stipe (botany), a stalk to support some other structure * Stipe (mycology), the stem of a mushro ...
literate students. ISB offers paid research internships for high school and undergraduate students, and offers advanced systems science courses throughout the year. ISB partnered in several high-profile research projects, the most significant one thus far being with the
Grand Duchy of Luxembourg Luxembourg ( ; lb, Lëtzebuerg ; french: link=no, Luxembourg; german: link=no, Luxemburg), officially the Grand Duchy of Luxembourg, ; french: link=no, Grand-Duché de Luxembourg ; german: link=no, Großherzogtum Luxemburg is a small land ...
to create the ''Center for Systems Biology Luxembourg'' and the ''Seattle Proteome Center''. ISB faculty members have launched several companies, including: Cytopeia (acquired by BD in 2008), Integrated Diagnostics, Macrogenics,
NanoString Technologies NanoString Technologies, Inc. (NASDAQ: NSTG) is a publicly-held biotech company offering discovery and translational research solutions. NanoString's products include the nCounter® Gene Expression System, the GeoMx® Digital Spatial Profiler, ...
, and Accelerator Corporation. Accelerator Corporation, in particular, is an investment company that provides venture capital funding and management for biotech startup companies. Its portfolio companies and graduates have focused on improved biotherapeutics, vaccines, biomarkers and other such products.


See also

*
List of systems sciences organizations Systems science is the interdisciplinary field of science surrounding systems theory, cybernetics, the science of complex systems. It aims to develop interdisciplinary foundations, which are applicable in a variety of areas, such as engineering, ...


References


External links


ISB websiteSeattle Proteome Center
{{authority control Bioinformatics organizations Systems biology Systems science institutes Research institutes in Seattle Research institutes established in 2000 2000 establishments in Washington (state)