Frankia alni
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''Frankia alni'' is a Gram-positive species of
actinomycete The Actinomycetales is an order of Actinomycetota. A member of the order is often called an actinomycete. Actinomycetales are generally gram-positive and anaerobic and have mycelia in a filamentous and branching growth pattern. Some actinomycete ...
filamentous The word filament, which is descended from Latin ''filum'' meaning " thread", is used in English for a variety of thread-like structures, including: Astronomy * Galaxy filament, the largest known cosmic structures in the universe * Solar filamen ...
bacterium Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
that lives in
symbiosis Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or para ...
with
actinorhizal plant Actinorhizal plants are a group of angiosperms characterized by their ability to form a symbiosis with the nitrogen fixing actinomycetota ''Frankia''. This association leads to the formation of nitrogen-fixing root nodules. Classification Actinor ...
s in the genus ''
Alnus Alders are trees comprising the genus ''Alnus'' in the birch family Betulaceae. The genus comprises about 35 species of monoecious trees and shrubs, a few reaching a large size, distributed throughout the north temperate zone with a few s ...
''. It is a nitrogen-fixing bacterium and forms nodules on the roots of alder trees.


Distribution

''Frankia alni'' forms a symbiotic relationship exclusively with trees in the genus ''Alnus''. These are widely distributed in temperate regions of the northern hemisphere. One species, ''
Alnus glutinosa ''Alnus glutinosa'', the common alder, black alder, European alder, European black alder, or just alder, is a species of tree in the family Betulaceae, native to most of Europe, southwest Asia and northern Africa. It thrives in wet locations ...
'', is also found in Africa and another, the Andean alder, ''
Alnus acuminata ''Alnus acuminata'' is a species of deciduous tree in the Betulaceae family. It is found in montane forests from central Mexico to Argentina.Zuloaga, F. O., O. N. Morrone, M. J. Belgrano, C. Marticorena & E. Marchesi. (eds.) 2008. Catálogo de ...
'', extends down the mountainous spine of Central and South America as far as Argentina. Evidence suggests that this alder may have been exploited by the
Inca The Inca Empire (also known as the Incan Empire and the Inka Empire), called ''Tawantinsuyu'' by its subjects, ( Quechua for the "Realm of the Four Parts",  "four parts together" ) was the largest empire in pre-Columbian America. The adm ...
s and used to increase
soil fertility Soil fertility refers to the ability of soil to sustain agricultural plant growth, i.e. to provide plant habitat and result in sustained and consistent yields of high quality.
and stabilize terrace soils in their upland farming systems. Actinomycetota, like ''Frankia alni'', need a flagellum to be mobile, but ''F. alni'' does not have one, and is immobile. ''Alnus'' species grow in a wide range of habitats that include glacial till, sand hills, the banks of water courses, bogs, dry volcanic lava flows and ash alluvium.


Infection process

The first symptom of infection by ''Frankia alni'' is a branching and curling of the root hairs of the alder as the bacterium moves in. The bacterium becomes encapsulated with a material derived from the plant cell wall and remains outside the host's cell membrane. The encapsulation membrane contains
pectin Pectin ( grc, πηκτικός ': "congealed" and "curdled") is a heteropolysaccharide, a structural acid contained in the primary lamella, in the middle lamella, and in the cell walls of terrestrial plants. The principal, chemical component o ...
,
cellulose Cellulose is an organic compound with the formula , a polysaccharide consisting of a linear chain of several hundred to many thousands of β(1→4) linked D-glucose units. Cellulose is an important structural component of the primary cell wa ...
and hemicellulose. Cell division is stimulated in the hypodermis and cortex, which leads to the formation of a "prenodule". The bacterium then migrates into the cortex of the root while the nodule continues to develop in the same way as a lateral root. Nodule lobe primordia develop in the pericycle,
endodermis The endodermis is the central, innermost layer of cortex in land plants. It is a cylinder of compact living cells, the radial walls of which are impregnated with hydrophobic substances (Casparian strip) to restrict apoplastic flow of water to th ...
or cortex during the development of the prenodule and finally the bacterium enters the cells of these to infect the new nodule.


Nitrogen fixation

left, Common alder, ''Alnus glutinosa'' In nitrogen-free culture and often in symbiosis, ''Frankia alni'' bacteria surround themselves in "vesicles". These are roughly spherical cellular structures that measure two to six millimetres in diameter and have a laminated
lipid Lipids are a broad group of naturally-occurring molecules which includes fats, waxes, sterols, fat-soluble vitamins (such as vitamins A, D, E and K), monoglycerides, diglycerides, phospholipids, and others. The functions of lipids in ...
envelope. The vesicles serve to limit the diffusion of
oxygen Oxygen is the chemical element with the symbol O and atomic number 8. It is a member of the chalcogen group in the periodic table, a highly reactive nonmetal, and an oxidizing agent that readily forms oxides with most elements ...
, thus assisting the reduction process that is catalysed by the enzyme nitrogenase. This enzyme bonds each atom of
nitrogen Nitrogen is the chemical element with the symbol N and atomic number 7. Nitrogen is a nonmetal and the lightest member of group 15 of the periodic table, often called the pnictogens. It is a common element in the universe, estimated at se ...
to three
hydrogen Hydrogen is the chemical element with the symbol H and atomic number 1. Hydrogen is the lightest element. At standard conditions hydrogen is a gas of diatomic molecules having the formula . It is colorless, odorless, tasteless, non-to ...
atoms, forming
ammonia Ammonia is an inorganic compound of nitrogen and hydrogen with the formula . A stable binary hydride, and the simplest pnictogen hydride, ammonia is a colourless gas with a distinct pungent smell. Biologically, it is a common nitrogenous ...
(NH3). The energy for the reaction is provided by the hydrolysis of
Adenosine triphosphate Adenosine triphosphate (ATP) is an organic compound that provides energy to drive many processes in living cells, such as muscle contraction, nerve impulse propagation, condensate dissolution, and chemical synthesis. Found in all known forms ...
(ATP). Two other enzymes are also involved in the process, glutamine synthetase and
glutamate synthase Glutamate synthase (also known as Glutamine oxoglutarate aminotransferase) is an enzyme and frequently abbreviated as GOGAT. This enzyme manufactures glutamate from glutamine and α-ketoglutarate, and thus along with glutamine synthetase (abbrev ...
. The final product of the reactions is
glutamate Glutamic acid (symbol Glu or E; the ionic form is known as glutamate) is an α-amino acid that is used by almost all living beings in the biosynthesis of proteins. It is a non-essential nutrient for humans, meaning that the human body can synt ...
, which is thus normally the most abundant free amino acid in the cell cytoplasm. A by-product of the process is gaseous hydrogen, one molecule of which is produced for every molecule of nitrogen reduced to ammonia, but the bacterium also contains the enzyme hydrogenase, which serves to prevent some of this energy being wasted. In the process, ATP is recovered and oxygen molecules serve as the final electron acceptor in the reaction, leading to the lowering of ambient oxygen levels. This is to the benefit of the nitrogenases, which only function anaerobically. As a result of their mutually beneficial relationship with ''Frankia'', alder trees improve the
fertility Fertility is the capability to produce offspring through reproduction following the onset of sexual maturity. The fertility rate is the average number of children born by a female during her lifetime and is quantified demographically. Ferti ...
of the
soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former ...
s in which they grow and are considered to be a pioneer species, making the soil more fertile and thus enabling other successional species to become established.


Dispersal

In culture and in some root nodules, multilocular
sporangia A sporangium (; from Late Latin, ) is an enclosure in which spores are formed. It can be composed of a single cell or can be multicellular. Virtually all plants, fungi, and many other lineages form sporangia at some point in their life cy ...
containing many
spore In biology, a spore is a unit of sexual or asexual reproduction that may be adapted for dispersal and for survival, often for extended periods of time, in unfavourable conditions. Spores form part of the life cycles of many plants, algae, ...
s are produced. The sporangia are non-motile but the spores can migrate to infect new host plants. A Swedish study found that root nodules developed on transplanted seedlings of the grey alder, ''Alnus incana'', planted in meadow soil that had not grown actinorhizal plants for nearly sixty years. A similar experiment planting seedlings in deep layers of
peat Peat (), also known as turf (), is an accumulation of partially Decomposition, decayed vegetation or organic matter. It is unique to natural areas called peatlands, bogs, mires, Moorland, moors, or muskegs. The peatland ecosystem covers and ...
where the surface layer had been removed, did not produce nodulation. This seems to have been because there were no infective propagules of ''Frankia alna'' deep in the peat. No air-borne dispersal of ''Frankia alni'' was detected and it was thought that movement of water might account for the dispersal of the bacteria in peat soils.


References


External links


''Frankia'' and actinorhizal plants

Type strain of ''Frankia alni'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q5490884 Actinomycetia Bacteria described in 1866