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''Bacteroides'' is a genus of Gram-negative,
obligate anaerobic Obligate anaerobes are microorganisms killed by normal atmospheric concentrations of oxygen (20.95% O2). Oxygen tolerance varies between species, with some species capable of surviving in up to 8% oxygen, while others lose viability in environme ...
bacteria. ''Bacteroides'' species are non
endospore An endospore is a dormant, tough, and non-reproductive structure produced by some bacteria in the phylum Bacillota. The name "endospore" is suggestive of a spore or seed-like form (''endo'' means 'within'), but it is not a true spore (i.e., no ...
-forming bacilli, and may be either motile or nonmotile, depending on the species. The DNA base composition is 40–48% GC. Unusual in bacterial organisms, ''Bacteroides'' membranes contain sphingolipids. They also contain meso-diaminopimelic acid in their
peptidoglycan layer Peptidoglycan or murein is a unique large macromolecule, a polysaccharide, consisting of sugars and amino acids that forms a mesh-like peptidoglycan layer outside the plasma membrane, the rigid cell wall (murein sacculus) characteristic of most ba ...
. ''Bacteroides'' species are normally mutualistic, making up the most substantial portion of the mammalian gastrointestinal microbiota, where they play a fundamental role in processing of complex molecules to simpler ones in the host intestine. As many as 1010–1011 cells per gram of human feces have been reported. They can use simple sugars when available; however, the main sources of energy for ''Bacteroides'' species in the gut are complex host-derived and plant
glycan The terms glycans and polysaccharides are defined by IUPAC as synonyms meaning "compounds consisting of a large number of monosaccharides linked glycosidically". However, in practice the term glycan may also be used to refer to the carbohydrate p ...
s. Studies indicate that long-term diet is strongly associated with the gut microbiome composition—those who eat plenty of protein and animal fats have predominantly ''Bacteroides'' bacteria, while for those who consume more carbohydrates the '' Prevotella'' species dominate. One of the most important clinically is '' Bacteroides fragilis''. '' Bacteroides melaninogenicus'' has recently been reclassified and split into ''
Prevotella melaninogenica ''Prevotella melaninogenica'' is a species of bacterium in the normal microbiota of the upper respiratory tract. It is an important human pathogen in various anaerobic infections, often mixed with other aerobic and anaerobic bacteria. ''P. melan ...
'' and '' Prevotella intermedia''.


Pathogenesis

''Bacteroides'' species also benefit their host by excluding potential pathogens from colonizing the gut. Some species (''B. fragilis'', for example) are opportunistic human pathogens, causing infections of the peritoneal cavity, gastrointestinal surgery, and appendicitis via abscess formation, inhibiting phagocytosis, and inactivating beta-lactam antibiotics. Although ''Bacteroides'' species are anaerobic, they are transiently aerotolerant and thus can survive in the abdominal cavity. In general, ''Bacteroides'' are resistant to a wide variety of
antibiotic An antibiotic is a type of antimicrobial substance active against bacteria. It is the most important type of antibacterial agent for fighting bacterial infections, and antibiotic medications are widely used in the treatment and prevention of ...
s—β-lactams,
aminoglycosides Aminoglycoside is a medicinal and bacteriologic category of traditional Gram-negative antibacterial medications that inhibit protein synthesis and contain as a portion of the molecule an amino-modified glycoside (sugar). The term can also refer ...
, and recently many species have acquired resistance to
erythromycin Erythromycin is an antibiotic used for the treatment of a number of bacterial infections. This includes respiratory tract infections, skin infections, chlamydia infections, pelvic inflammatory disease, and syphilis. It may also be used duri ...
and tetracycline. This high level of
antibiotic resistance Antimicrobial resistance (AMR) occurs when microbes evolve mechanisms that protect them from the effects of antimicrobials. All classes of microbes can evolve resistance. Fungi evolve antifungal resistance. Viruses evolve antiviral resistance. ...
has prompted concerns that ''Bacteroides'' species may become a reservoir for resistance in other, more highly pathogenic bacterial strains. It has been often considered susceptible to
clindamycin Clindamycin is an antibiotic medication used for the treatment of a number of bacterial infections, including osteomyelitis (bone) or joint infections, pelvic inflammatory disease, strep throat, pneumonia, acute otitis media (middle ear infec ...
, but recent evidence demonstrated an increasing trend in clindamycin resistance rates (up to 33%).


Microbiological applications

An alternative fecal indicator organism, ''Bacteroides'', has been suggested because they make up a significant portion of the fecal bacterial population, have a high degree of host specificity that reflects differences in the digestive system of the host animal Over the past decade, real-time polymerase chain reaction (PCR) methods have been used to detect the presence of various microbial pathogens through the amplification of specific DNA sequences without culturing bacteria. One study has measured the amount of ''Bacteroides'' by using qPCR to quantify the host-specific 16S rRNA genetic marker. This technique allows quantification of genetic markers that are specific to the host of the bacteria Bacteroides and allow detection of recent contamination. A recent report found temperature plays a major role in the amount of time the bacteria will persist in the environment, the life span increases with colder temperatures (0–4 Â°C). Early research suggests tha
affects brain development
"A new study has found that there is a three-way relationship between a type of gut bacteria, cortisol, and brain metabolites. This relationship, the researchers hypothesize, may potentially lead to further insight into autism, but more in-depth studies are needed." Another study showed a 5.6-times higher risk of osteoporosis fractures in the low Bacteroides group of Japanese postmenopausal women.


Human

Members of the Bacillota and
Bacteroidota The phylum Bacteroidota (synonym Bacteroidetes) is composed of three large classes of Gram-negative, nonsporeforming, anaerobic or aerobic, and rod-shaped bacteria that are widely distributed in the environment, including in soil, sediments, and ...
phyla make up a majority of the bacterial species in the human intestinal microbiota (the "gut microbiome"). The healthy human gut microbiome consists of 109 abundant species of which 31 (19.7%) are members of the Bacteroidetes while 63 (40%) and 32 (20%) belong to Bacillota and Actinomycetota. ''Bacteroides'' species' main source of energy is fermentation of a wide range of sugar derivatives from plant material. These compounds are common in the human colon and are potentially toxic. ''Bacteroides'' such as ''
Bacteroides thetaiotaomicron ''Bacteroides thetaiotaomicron'' (formerly ''Bacillus thetaiotaomicron'') is a species of bacterium of the genus ''Bacteroides''. It is a gram-negative obligate anaerobe. It is one of the most common bacteria found in human gut microbiota and is ...
'' converts these sugars to fermentation products which are beneficial to humans. ''Bacteroides'' also have the ability to remove side chains from bile acids, thus returning bile acids to the hepatic circulation. There is data suggesting that members of ''Bacteroides'' affect the lean or obese phenotype in humans. In this article, one human twin is obese while the other is lean. When their fecal microbiota is transplanted into germ-free mice, the phenotype in the mouse model corresponds to that in humans.


See also

* ''
CrAssphage CrAss-like phage are a bacteriophage (virus that infects bacteria) family that was discovered in 2014 by cross assembling reads in human fecal metagenomes. In silico comparative genomics and taxonomic analysis have found that crAss-like phages repre ...
'' * '' Cytophaga'' * '' Flavobacterium''


References


External links


Bacteroides infections in E Medicine


in detail. {{Taxonbar, from=Q133186 Bacteroidia Gram-negative bacteria Medically important anaerobes Gut flora bacteria Bacteria genera