1st round
Ties
Replays
2nd round
The teams that given byes to this round are Cheltenham Town, Doncaster Rovers, Woking, Rushden & Diamonds, Morecambe, Hereford United, Hednesford Town, Northwich Victoria, Welling United, Yeovil Town, Hayes, Dover Athletic, Kettering Town, Stevenage Borough, Southport, Kidderminster Harriers, Farnborough Town, Leek Town, Telford United, Forest Green Rovers, Barrow, Kingstonian, Slough Town, Chorley, Colwyn Bay, Merthyr Tydfil, Leigh R M I, Sutton United, Hendon, Emley, Altrincham, Basingstoke Town, Atherstone United, St Albans City, Nuneaton Borough, Gravesend & Northfleet, Chesham United, Tamworth, Bromley, Rothwell Town, Dulwich Hamlet, Aylesbury United, Bromsgrove Rovers, Aldershot Town, Worksop Town, Sittingbourne, Ashford Town (Kent), Yeading, Alfreton Town, Hitchin Town, Oxford City, Fisher Athletic London, Margate, Droylsden, Lincoln United, Uxbridge, Raunds Town, Moor Green, Witton Albion, Romford, Clevedon Town, Bognor Regis Town, Havant & Waterlooville, Dartford, Worthing, Tonbridge Angels, Whitley Bay, Berkhamsted Town, Bedworth United, Racing Club Warwick, Shepshed Dynamo, Netherfield Kendal, Barton Rovers, Evesham United, Harrogate Town, Corby Town, Great Harwood Town, Andover, Burscough and Hucknall Town.Ties
Replays
3rd round
Ties
Replays
4th round
Ties
Replays
5th round
Ties
Replays
Quarter finals
Ties
Semi finals
First leg
Second leg
Final
Tie
References
General
Specific
{{DEFAULTSORT:FA Trophy 1998-99 1998–99 domestic association football cups