Chironomoidea
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Chironomoidea
The Chironomoidea are a superfamily within the order Diptera, suborder Nematocera, infraorder Culicomorpha. This superfamily contains the families Chironomidae, Ceratopogonidae, Simuliidae, and Thaumaleidae. Description Chironomoidea have four life stages: the egg, the worm-like larva, the pupa and the winged adult. Ecology Chironomoidea show a range of habitats and diets. Using the family Chironomidae as an example, larvae occur most commonly in aquatic vegetation and benthic debris, but also in sand covered in fine organic material, pools on granite outcrops, wood snags, muddy lake beds and hygropetric seepages. Pupae may occur near the surface of water, in submerged substrata or amongst benthic debris. Larvae may feed on deposits of organic detritus (gathering collectors), filter diatoms and fine particles of detritus from the water column (filtering collectors), chew or bore into live or dead plant matter (shredders), scrape algae, bacteria and diatoms from surface ...
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Chironomoidea
The Chironomoidea are a superfamily within the order Diptera, suborder Nematocera, infraorder Culicomorpha. This superfamily contains the families Chironomidae, Ceratopogonidae, Simuliidae, and Thaumaleidae. Description Chironomoidea have four life stages: the egg, the worm-like larva, the pupa and the winged adult. Ecology Chironomoidea show a range of habitats and diets. Using the family Chironomidae as an example, larvae occur most commonly in aquatic vegetation and benthic debris, but also in sand covered in fine organic material, pools on granite outcrops, wood snags, muddy lake beds and hygropetric seepages. Pupae may occur near the surface of water, in submerged substrata or amongst benthic debris. Larvae may feed on deposits of organic detritus (gathering collectors), filter diatoms and fine particles of detritus from the water column (filtering collectors), chew or bore into live or dead plant matter (shredders), scrape algae, bacteria and diatoms from surface ...
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Culicomorpha
The Culicomorpha are an infraorder of Nematocera, including mosquitoes, black flies, and several extant and extinct families of insects. They originated 176 million years ago, in the Triassic period. There are phylogenetic patterns that are used to interpret bionomic features such as differences in the nature of blood-feeding by adult females, daytime or nighttime feeding by adult females, and occurrence of immature stages in aquatic habitats. Most adult, females lay their eggs on bodies of water. Some are restricted to very clean waters, but others can tolerate highly polluted environments. Many adults transmit parasites or diseases that can be debilitating or fatal to humans, such as malaria and West Nile virus. Biting midges can transmit an extensive range of pathogens of veterinary importance, including Akabane virus, bovine ephemeral fever virus, Schmallenberg virus, African horse sickness virus, epizootic haemorrhagic disease virus, and bluetongue virus. Classification ...
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Benthic Zone
The benthic zone is the ecological region at the lowest level of a body of water such as an ocean, lake, or stream, including the sediment surface and some sub-surface layers. The name comes from ancient Greek, βένθος (bénthos), meaning "the depths." Organisms living in this zone are called benthos and include microorganisms (e.g., bacteria and fungi) as well as larger invertebrates, such as crustaceans and polychaetes. Organisms here generally live in close relationship with the substrate and many are permanently attached to the bottom. The benthic boundary layer, which includes the bottom layer of water and the uppermost layer of sediment directly influenced by the overlying water, is an integral part of the benthic zone, as it greatly influences the biological activity that takes place there. Examples of contact soil layers include sand bottoms, rocky outcrops, coral, and bay mud. Description Oceans The benthic region of the ocean begins at the shore line ( intert ...
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Middle Triassic
In the geologic timescale, the Middle Triassic is the second of three epochs of the Triassic period or the middle of three series in which the Triassic system is divided in chronostratigraphy. The Middle Triassic spans the time between Ma and Ma (million years ago). It is preceded by the Early Triassic Epoch and followed by the Late Triassic Epoch. The Middle Triassic is divided into the Anisian and Ladinian ages or stages. Formerly the middle series in the Triassic was also known as Muschelkalk. This name is now only used for a specific unit of rock strata with approximately Middle Triassic age, found in western Europe. Middle Triassic fauna Following the Permian–Triassic extinction event, the most devastating of all mass-extinctions, life recovered slowly. In the Middle Triassic, many groups of organisms reached higher diversity again, such as the marine reptiles (e.g. ichthyosaurs, sauropterygians, thallatosaurs), ray-finned fish and many invertebrate groups li ...
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Monophyly
In cladistics for a group of organisms, monophyly is the condition of being a clade—that is, a group of taxa composed only of a common ancestor (or more precisely an ancestral population) and all of its lineal descendants. Monophyletic groups are typically characterised by shared derived characteristics ( synapomorphies), which distinguish organisms in the clade from other organisms. An equivalent term is holophyly. The word "mono-phyly" means "one-tribe" in Greek. Monophyly is contrasted with paraphyly and polyphyly as shown in the second diagram. A ''paraphyletic group'' consists of all of the descendants of a common ancestor minus one or more monophyletic groups. A '' polyphyletic group'' is characterized by convergent features or habits of scientific interest (for example, night-active primates, fruit trees, aquatic insects). The features by which a polyphyletic group is differentiated from others are not inherited from a common ancestor. These definitions have tak ...
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Transcriptome
The transcriptome is the set of all RNA transcripts, including coding and non-coding, in an individual or a population of cells. The term can also sometimes be used to refer to all RNAs, or just mRNA, depending on the particular experiment. The term ''transcriptome'' is a portmanteau of the words ''transcript'' and ''genome''; it is associated with the process of transcript production during the biological process of transcription. The early stages of transcriptome annotations began with cDNA libraries published in the 1980s. Subsequently, the advent of high-throughput technology led to faster and more efficient ways of obtaining data about the transcriptome. Two biological techniques are used to study the transcriptome, namely DNA microarray, a hybridization-based technique and RNA-seq, a sequence-based approach. RNA-seq is the preferred method and has been the dominant transcriptomics technique since the 2010s. Single-cell transcriptomics allows tracking of transcript change ...
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Ribosomal RNA
Ribosomal ribonucleic acid (rRNA) is a type of non-coding RNA which is the primary component of ribosomes, essential to all cells. rRNA is a ribozyme which carries out protein synthesis in ribosomes. Ribosomal RNA is transcribed from ribosomal DNA (rDNA) and then bound to ribosomal proteins to form small and large ribosome subunits. rRNA is the physical and mechanical factor of the ribosome that forces transfer RNA (tRNA) and messenger RNA (mRNA) to process and translate the latter into proteins. Ribosomal RNA is the predominant form of RNA found in most cells; it makes up about 80% of cellular RNA despite never being translated into proteins itself. Ribosomes are composed of approximately 60% rRNA and 40% ribosomal proteins by mass. Structure Although the primary structure of rRNA sequences can vary across organisms, base-pairing within these sequences commonly forms stem-loop configurations. The length and position of these rRNA stem-loops allow them to create thre ...
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Nectar
Nectar is a sugar-rich liquid produced by plants in glands called nectaries or nectarines, either within the flowers with which it attracts pollinating animals, or by extrafloral nectaries, which provide a nutrient source to animal mutualists, which in turn provide herbivore protection. Common nectar-consuming pollinators include mosquitoes, hoverflies, wasps, bees, butterflies and moths, hummingbirds, honeyeaters and bats. Nectar plays a crucial role in the foraging economics and evolution of nectar-eating species; for example, nectar foraging behavior is largely responsible for the divergent evolution of the African honey bee, ''A. m. scutellata'' and the western honey bee. Nectar is an economically important substance as it is the sugar source for honey. It is also useful in agriculture and horticulture because the adult stages of some predatory insects feed on nectar. For example, a number of parasitoid wasps (e.g. the social wasp species '' Apoica flavissima'') ...
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Diatom
A diatom ( Neo-Latin ''diatoma''), "a cutting through, a severance", from el, διάτομος, diátomos, "cut in half, divided equally" from el, διατέμνω, diatémno, "to cut in twain". is any member of a large group comprising several genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of the Earth's biomass: they generate about 20 to 50 percent of the oxygen produced on the planet each year, take in over 6.7 billion metric tons of silicon each year from the waters in which they live, and constitute nearly half of the organic material found in the oceans. The shells of dead diatoms can reach as much as a half-mile (800 m) deep on the ocean floor, and the entire Amazon basin is fertilized annually by 27 million tons of diatom shell dust transported by transatlantic winds from the African Sahara, much of it from the Bodélé Depression, which was once made up of a system of fr ...
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Detritus
In biology, detritus () is dead particulate organic material, as distinguished from dissolved organic material. Detritus typically includes the bodies or fragments of bodies of dead organisms, and fecal material. Detritus typically hosts communities of microorganisms that colonize and decompose (i.e. remineralize) it. In terrestrial ecosystems it is present as leaf litter and other organic matter that is intermixed with soil, which is denominated " soil organic matter". The detritus of aquatic ecosystems is organic material that is suspended in the water and accumulates in depositions on the floor of the body of water; when this floor is a seabed, such a deposition is denominated " marine snow". Theory The corpses of dead plants or animals, material derived from animal tissues (e.g. molted skin), and fecal matter gradually lose their form due to physical processes and the action of decomposers, including grazers, bacteria, and fungi. Decomposition, the process by w ...
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Snag (ecology)
In forest ecology, a snag refers to a standing, dead or dying tree, often missing a top or most of the smaller branches. In freshwater ecology it refers to trees, branches, and other pieces of naturally occurring wood found sunken in rivers and streams; it is also known as coarse woody debris. When used in manufacturing, especially in Scandinavia, they are often called dead wood and in Finland, kelo wood. Forest snags Snags are an important structural component in forest communities, making up 10–20% of all trees present in old-growth tropical, temperate, and boreal forests. Snags and downed coarse woody debris represent a large portion of the woody biomass in a healthy forest. In temperate forests, snags provide critical habitat for more than 100 species of bird and mammal, and snags are often called 'wildlife trees' by foresters. Dead, decaying wood supports a rich community of decomposers like bacteria and fungi, insects, and other invertebrates. These organisms a ...
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Chironomus
''Chironomus'' is a genus of nonbiting midges in the subfamily Chironominae of the bloodworm family, Chironomidae, containing several cryptic species that can only be distinguished by experts based on the characteristics of their giant chromosomes. Description Adult ''Chironomus'' are midges with the pronotum widest in the middle and bearing a notch, the head usually bearing a pair of small tubercles above the antennal bases, the antennal flagellum of males having 11 segments, and the male genitalia has inferior volsella large and larger than superior volsella. They range from 5 to 13 mm in length. Larvae are red and usually have tubes on the side or bottom of the eighth abdominal segment. These features are not unique to ''Chironomus'', also being found in some related genera. Adult males can be distinguished from females by their feather-like antennae. Behaviour When at rest, adults often raise their front legs and vibrate them. This is the source of the genus name, whic ...
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