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The tetrad is the four spores produced after meiosis of a yeast or other Ascomycota, ''Chlamydomonas'' or other alga, or a plant. After parent haploids mate, they produce diploids. Under appropriate environmental conditions, diploids sporulate and undergo meiosis. The meiotic products, spores, remain packaged in the parental cell body to produce the tetrad.


Genetic typification

If the two parents have a mutation in two different genes, the tetrad can segregate these genes as the parental ditype ( PD), the non-parental ditype (NPD) or as the tetratype (TT). Parental ditype is a tetrad type containing two different
genotypes The genotype of an organism is its complete set of genetic material. Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location. The number of alleles an individual can have in a ...
, both of which are parental. A spore arrangement in
ascomycetes Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defi ...
that contains only the two non-recombinant-type
ascospores An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or s ...
. Non-parental ditype (NPD) is a spore that contains only the two recombinant-type
ascospores An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or s ...
(assuming two segregating loci). A tetrad type containing two different genotypes, both of which are recombinant. Tetratype is a tetrad containing four different genotypes, two parental and two recombinant. A spore arrangement in ascomycetes that consists of two parental and two recombinant spores indicates a single crossover between two linked loci.


Linkage analysis

The ratio between the different segregation types arising after the sporulation is a measure of the linkage between the two genes.


Tetrad dissection

Tetrad dissection has become a powerful tool of yeast geneticists, and is used in conjunction with the many established procedures utilizing the versatility of yeasts as
model organism A model organism (often shortened to model) is a non-human species that is extensively studied to understand particular biological phenomena, with the expectation that discoveries made in the model organism will provide insight into the working ...
s. Use of modern
microscopy Microscopy is the technical field of using microscopes to view objects and areas of objects that cannot be seen with the naked eye (objects that are not within the resolution range of the normal eye). There are three well-known branches of mic ...
and micromanipulation techniques allows the four haploid spores of a yeast tetrad to be separated and germinated individually to form isolated spore colonies.


Uses

Tetrad analysis can be used to confirm whether a phenotype is caused by a specific mutation, construction of strains, and for investigating gene interaction. Since the frequency of tetrad segregation types is influenced by the recombination frequency for the two markers, the segregation data can be used to calculate the genetic distance between the markers if they are close on the same chromosome. Tetrad analyses have also contributed to detection and study of the phenomena of gene conversion and post-meiotic segregation. These studies have proven central to understanding the mechanism of meiotic recombination, which in turn is a key to understanding the adaptive function of sexual reproduction. The use of tetrads in fine-structure genetic analysis is described in the articles ''
Neurospora crassa ''Neurospora crassa'' is a type of red bread mold of the phylum Ascomycota. The genus name, meaning "nerve spore" in Greek, refers to the characteristic striations on the spores. The first published account of this fungus was from an infestation ...
'' and
Gene conversion Gene conversion is the process by which one DNA sequence replaces a homologous sequence such that the sequences become identical after the conversion event. Gene conversion can be either allelic, meaning that one allele of the same gene replaces a ...
.


General procedure

Crosses are performed between haploid MATa and MATĪ± mating strains, then the resulting diploids are transferred to sporulation media to form a tetrad containing four haploid spores. Tetrads can then be prepared with Zymolyase, or another enzyme, to digest the wall of the ascus. The spores are then separated with a micromanipulator needle and deposited in separate positions on a
petri dish A Petri dish (alternatively known as a Petri plate or cell-culture dish) is a shallow transparent lidded dish that biologists use to hold growth medium in which cells can be cultured,R. C. Dubey (2014): ''A Textbook Of Biotechnology For Class-X ...
.


Tools

Traditionally, tetrad dissection has a reputation as "black art".Yeast Protocols: Methods in Cell and Molecular Biology, Ivor Howell Evan, Published by Humana Press, 1996, , However, instruments have since been developed specifically for tetrad dissection; the most advanced allow easy and semi-automated separation of tetrads. Most micromanipulators use a glass fiber needle to which the spores adhere due to the formation of a water
meniscus Meniscus may refer to: *Meniscus (anatomy), crescent-shaped fibrocartilaginous structure that partly divides a joint cavity *Meniscus (liquid), a curve in the upper surface of liquid contained in an object *Meniscus (optics) A lens is a tr ...
between the
agar Agar ( or ), or agar-agar, is a jelly-like substance consisting of polysaccharides obtained from the cell walls of some species of red algae, primarily from ogonori ('' Gracilaria'') and "tengusa" ('' Gelidiaceae''). As found in nature, agar ...
and the needle.


See also

*
Synthetic genetic array Synthetic genetic array analysis (SGA) is a high-throughput technique for exploring synthetic lethal and synthetic sick genetic interactions (SSL). SGA allows for the systematic construction of double mutants using a combination of recombinant g ...
*''
Saccharomyces cerevisiae ''Saccharomyces cerevisiae'' () (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungus microorganisms). The species has been instrumental in winemaking, baking, and brewing since ancient times. It is believed to have been ...
'' *
Ascus An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or ...
*
Homologous recombination Homologous recombination is a type of genetic recombination in which genetic information is exchanged between two similar or identical molecules of double-stranded or single-stranded nucleic acids (usually DNA as in cellular organisms but may be ...
*
Genetic recombination Genetic recombination (also known as genetic reshuffling) is the exchange of genetic material between different organisms which leads to production of offspring with combinations of traits that differ from those found in either parent. In eukaryot ...
*
Ascospore An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or s ...


References

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External links


"Crosses, diploids, and tetrads"
Fungus genetics Plant genetics