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A cold seep (sometimes called a cold vent) is an area of the
ocean floor The seabed (also known as the seafloor, sea floor, ocean floor, and ocean bottom) is the bottom of the ocean. All floors of the ocean are known as 'seabeds'. The structure of the seabed of the global ocean is governed by plate tectonics. Most of ...
where
hydrogen sulfide Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is poisonous, corrosive, and flammable, with trace amounts in ambient atmosphere having a characteristic foul odor of rotten eggs. The under ...
,
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
and other
hydrocarbon In organic chemistry, a hydrocarbon is an organic compound consisting entirely of hydrogen and carbon. Hydrocarbons are examples of group 14 hydrides. Hydrocarbons are generally colourless and hydrophobic, and their odors are usually weak or ...
-rich fluid seepage occurs, often in the form of a brine pool. ''Cold'' does not mean that the temperature of the seepage is lower than that of the surrounding sea water. On the contrary, its temperature is often slightly higher. The "cold" is relative to the very warm (at least ) conditions of a
hydrothermal vent A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspo ...
. Cold seeps constitute a
biome A biome () is a biogeographical unit consisting of a biological community that has formed in response to the physical environment in which they are found and a shared regional climate. Biomes may span more than one continent. Biome is a broader ...
supporting several
endemic Endemism is the state of a species being found in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also found else ...
species. Cold seeps develop unique
topography Topography is the study of the forms and features of land surfaces. The topography of an area may refer to the land forms and features themselves, or a description or depiction in maps. Topography is a field of geoscience and planetary sc ...
over time, where reactions between methane and seawater create
carbonate A carbonate is a salt of carbonic acid (H2CO3), characterized by the presence of the carbonate ion, a polyatomic ion with the formula . The word ''carbonate'' may also refer to a carbonate ester, an organic compound containing the carbonate ...
rock formations and
reef A reef is a ridge or shoal of rock, coral or similar relatively stable material, lying beneath the surface of a natural body of water. Many reefs result from natural, abiotic processes—deposition of sand, wave erosion planing down rock ...
s. These reactions may also be dependent on bacterial activity.
Ikaite Ikaite is the mineral name for the hexahydrate of calcium carbonate, CaCO3·6H2O. Ikaite tends to form very steep or spiky pyramidal crystals, often radially arranged, of varied sizes from thumbnail size aggregates to gigantic salient spurs. It ...
, a hydrous calcium carbonate, can be associated with oxidizing methane at cold seeps.


Types

Types of cold seeps can be distinguished according to the depth, as shallow cold seeps and deep cold seeps. Cold seeps can also be distinguished in detail, as follows: *
oil An oil is any nonpolar chemical substance that is composed primarily of hydrocarbons and is hydrophobic (does not mix with water) & lipophilic (mixes with other oils). Oils are usually flammable and surface active. Most oils are unsaturated ...
/gas seeps * gas seeps:
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
seeps *
gas hydrate Clathrate hydrates, or gas hydrates, clathrates, hydrates, etc., are crystalline water-based solids physically resembling ice, in which small non-polar molecules (typically gases) or polar molecules with large hydrophobic moieties are trapped ...
seeps * brine seeps are formed in brine pools * pockmarks *
mud volcano A mud volcano or mud dome is a landform created by the eruption of mud or slurries, water and gases. Several geological processes may cause the formation of mud volcanoes. Mud volcanoes are not true igneous volcanoes as they do not produce ...
es


Formation and ecological succession

Cold seeps occur over fissures on the seafloor caused by
tectonic Tectonics (; ) are the processes that control the structure and properties of the Earth's crust and its evolution through time. These include the processes of mountain building, the growth and behavior of the strong, old cores of continents ...
activity.
Oil An oil is any nonpolar chemical substance that is composed primarily of hydrocarbons and is hydrophobic (does not mix with water) & lipophilic (mixes with other oils). Oils are usually flammable and surface active. Most oils are unsaturated ...
and
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
"seep" out of those fissures, get diffused by sediment, and emerge over an area several hundred meters wide. Methane () is the main component of what we commonly refer to as
natural gas Natural gas (also called fossil gas or simply gas) is a naturally occurring mixture of gaseous hydrocarbons consisting primarily of methane in addition to various smaller amounts of other higher alkanes. Low levels of trace gases like carbon d ...
. But in addition to being an important energy source for humans, methane also forms the basis of a cold seep
ecosystem An ecosystem (or ecological system) consists of all the organisms and the physical environment with which they interact. These biotic and abiotic components are linked together through nutrient cycles and energy flows. Energy enters the syst ...
. Cold seep biota below typically exhibit much greater systematic specialization and reliance on
chemoautotrophy A Chemotroph is an organism that obtains energy by the oxidation of electron donors in their environments. These molecules can be organic (chemoorganotrophs) or inorganic (chemolithotrophs). The chemotroph designation is in contrast to phototro ...
than those from shelf depths. Deep-sea seeps sediments are highly heterogeneous. They sustain different
geochemical Geochemistry is the science that uses the tools and principles of chemistry to explain the mechanisms behind major geological systems such as the Earth's crust and its oceans. The realm of geochemistry extends beyond the Earth, encompassing the e ...
and microbial processes that are reflected in a complex mosaic of habitats inhabited by a mixture of specialist (
heterotrophic A heterotroph (; ) is an organism that cannot produce its own food, instead taking nutrition from other sources of organic carbon, mainly plant or animal matter. In the food chain, heterotrophs are primary, secondary and tertiary consumers, but ...
and symbiont-associated) and background fauna.


Chemosynthetic communities

Biological research in cold seeps and hydrothermal vents has been mostly focused on the
microbiology Microbiology () is the scientific study of microorganisms, those being unicellular (single cell), multicellular (cell colony), or acellular (lacking cells). Microbiology encompasses numerous sub-disciplines including virology, bacteriology, ...
and the prominent macro-invertebrates thriving on chemosynthetic microorganisms. Much less research has been done on the smaller
benthic The benthic zone is the ecological region at the lowest level of a body of water such as an ocean, lake, or stream, including the sediment surface and some sub-surface layers. The name comes from ancient Greek, βένθος (bénthos), meaning " ...
fraction at the size of the
meiofauna Meiobenthos, also called meiofauna, are small benthic invertebrates that live in both marine and fresh water environments. The term ''meiofauna'' loosely defines a group of organisms by their size, larger than microfauna but smaller than macrof ...
(<1 mm). Community composition's orderly shift from one set of species to another is called
ecological succession Ecological succession is the process of change in the species structure of an ecological community over time. The time scale can be decades (for example, after a wildfire) or more or less. Bacteria allows for the cycling of nutrients such as car ...
: The first type of organism to take advantage of this deep-sea energy source is
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
. Aggregating into
bacterial mat A biofilm comprises any syntrophic consortium of microorganisms in which cells stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular po ...
s at cold seeps, these bacteria metabolize methane and
hydrogen sulfide Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is poisonous, corrosive, and flammable, with trace amounts in ambient atmosphere having a characteristic foul odor of rotten eggs. The under ...
(another gas that emerges from seeps) for energy. This process of obtaining energy from chemicals is known as
chemosynthesis In biochemistry, chemosynthesis is the biological conversion of one or more carbon-containing molecules (usually carbon dioxide or methane) and nutrients into organic matter using the oxidation of inorganic compounds (e.g., hydrogen gas, hydrog ...
. During this initial stage, when methane is relatively abundant, dense
mussel Mussel () is the common name used for members of several families of bivalve molluscs, from saltwater and freshwater habitats. These groups have in common a shell whose outline is elongated and asymmetrical compared with other edible clams, which ...
beds also form near the cold seep. Mostly composed of species in the genus ''
Bathymodiolus ''Bathymodiolus'' is a genus of deep-sea mussels, marine bivalve molluscs in the family Mytilidae. Many of them contain intracelluar chemoautotrophic bacterial symbionts. Species Modern (non-fossil) species within the genus ''Bathymodiolus'' i ...
'', these mussels do not directly consume food. Instead, they are nourished by
symbiotic Symbiosis (from Greek , , "living together", from , , "together", and , bíōsis, "living") is any type of a close and long-term biological interaction between two different biological organisms, be it mutualistic, commensalistic, or para ...
bacteria that also produce energy from methane, similar to their relatives that form mats. Chemosynthetic bivalves are prominent constituents of the fauna of cold seeps and are represented in that setting by five families:
Solemyidae Solemyidae is a family of saltwater clams, marine protobranch bivalve mollusks in the order Solemyida. Biology Solemyids are remarkable in that their digestive tract is either extremely small or non-existent, and their feeding appendages are too ...
,
Lucinidae Lucinidae, common name hatchet shells, is a family of saltwater clams, marine bivalve molluscs. These bivalves are remarkable for their endosymbiosis with sulphide-oxidizing bacteria. Characteristics The members of this family have a worldwi ...
, Vesicomyidae,
Thyasiridae Thyasiridae is a family of bivalve molluscs, including the cleft clams, in the order Lucinida. Genera and species * '' Adontorhina'' S. S. Berry, 1947 ** '' Adontorhina cyclia'' S. S. Berry, 1947 ** '' Adontorhina keegani'' Barry & McCormack, ...
and
Mytilidae Mytilidae are a family of small to large marine and brackish-water bivalve molluscs in the order Mytilida. One of the genera, '' Limnoperna'', even inhabits freshwater environments. The order has only this one family which contains some 52 gener ...
. This microbial activity produces calcium carbonate, which is deposited on the
seafloor The seabed (also known as the seafloor, sea floor, ocean floor, and ocean bottom) is the bottom of the ocean The ocean (also the sea or the world ocean) is the body of salt water that covers approximately 70.8% of the surface of Earth an ...
and forms a layer of rock. During a period lasting up to several decades, these rock formations attract
siboglinid Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
tubeworms, which settle and grow along with the mussels. Like the mussels, tubeworms rely on chemosynthetic bacteria (in this case, a type that needs
hydrogen sulfide Hydrogen sulfide is a chemical compound with the formula . It is a colorless chalcogen-hydride gas, and is poisonous, corrosive, and flammable, with trace amounts in ambient atmosphere having a characteristic foul odor of rotten eggs. The under ...
instead of methane) for survival. True to any symbiotic relationship, a tubeworm also provides for their bacteria by appropriating hydrogen sulfide from the environment. The sulfide not only comes from the water, but is also mined from the sediment through an extensive "root" system a tubeworm "bush" establishes in the hard, carbonate substrate. A tubeworm bush can contain hundreds of individual worms, which can grow a meter or more above the sediment. Cold seeps do not last indefinitely. As the rate of gas seepage slowly decreases, the shorter-lived, methane-hungry mussels (or more precisely, their methane-hungry bacterial symbionts) start to die off. At this stage, tubeworms become the dominant organism in a seep community. As long as there is some sulfide in the sediment, the sulfide-mining tubeworms can persist. Individuals of one tubeworm species ''
Lamellibrachia luymesi ''Lamellibrachia luymesi'' is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacter ...
'' have been estimated to live for over 250 years in such conditions.


The Benthic Filter

The organisms living at cold seeps have a large impact on the carbon cycle and on climate. Chemosynthetic organisms, specifically methanogenic (methane-consuming) organisms, prohibit the methane seeping up from beneath the seafloor from being released into the water above. Since methane is such a potent greenhouse gas, methane release could cause global warming, as hypothesized in earth’s past when gas hydrate reservoirs destabilize. The consumption of methane by aerobic and anaerobic seafloor life is called “the benthic filter”. The first part of this filter is the anaerobic bacteria and archaea underneath the seafloor that consume methane through the Anaerobic Oxidation of Methane (AOM). If the flux of methane flowing through the sediment is too large, and the anaerobic bacteria and archaea are consuming the maximum amount of methane, then the excess methane is consumed by free-floating or symbiotic aerobic bacteria above the sediment at the seafloor. The symbiotic bacteria have been found in organisms such as tube worms and clams living at cold seeps; these organisms provide oxygen to the aerobic bacteria as the bacteria provide energy they obtain from the consumption of methane. Understanding how efficient the benthic filter is can help predict how much methane escapes the seafloor at cold seeps and enters the water column and eventually the atmosphere. Studies have shown that 50-90% of methane is consumed at cold seeps with bacterial mats. Areas with clam beds have less than 15% of methane escaping. Efficiency is determined by a number of factors. The benthic layer is more efficient with low flow of methane, and efficiency decreases as methane flow or the speed of flow increases. Oxygen demand for cold seep ecosystems is much higher than other benthic ecosystems, so if the bottom water does not have enough oxygen, the efficiency of aerobic microbes in removing methane is reduced. The benthic filter cannot affect methane that is not traveling through the sediment. Methane can bypass the benthic filter if they bubble to the surface or travel through cracks and fissures in the sediment. These organisms are the only biological sink of methane in the ocean.


Comparison with other communities

Cold seeps and
hydrothermal vent A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspo ...
s of deep oceans are communities that do not rely on
photosynthesis Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored in ...
for food and energy production. These systems are largely driven by chemosynthetic derived energy. Both systems share common characteristics such as the presence of reduced chemical compounds ( H2S and hydrocarbonates), local hypoxia or even anoxia, a high abundance and metabolic activity of bacterial populations, and the production of autochthonous, organic material by
chemoautotrophic A Chemotroph is an organism that obtains energy by the oxidation of electron donors in their environments. These molecules can be organic ( chemoorganotrophs) or inorganic (chemolithotrophs). The chemotroph designation is in contrast to phototro ...
bacteria. Both hydrothermal vents and cold seeps show regularly, highly increased levels of metazoan biomass in association with a low local diversity. This is explained through the presence of dense aggregations of foundation species and
epizootic In epizoology, an epizootic (from Greek: ''epi-'' upon + ''zoon'' animal) is a disease event in a nonhuman animal population analogous to an epidemic in humans. An epizootic may be restricted to a specific locale (an "outbreak"), general (an "epi ...
animals, living within these aggregations. Community-level comparisons reveal that vent, seep and organic-fall macrofauna are very distinct in terms of composition at the family level, although they share many dominant
taxa In biology, a taxon (back-formation from ''taxonomy''; plural taxa) is a group of one or more populations of an organism or organisms seen by taxonomists to form a unit. Although neither is required, a taxon is usually known by a particular nam ...
among highly sulphidic habitats. However, hydrothermal vents and cold seeps differ also in many ways. Compared to the more stable cold seeps, vents are characterized by locally high temperatures, strongly fluctuating temperatures, pH, sulfide and oxygen concentrations, often the absence of sediments, a relatively young age, and often unpredictable conditions, such as waxing and waning of vent fluids or volcanic eruptions. Unlike hydrothermal vents, which are volatile and
ephemeral Ephemerality (from the Greek word , meaning 'lasting only one day') is the concept of things being transitory, existing only briefly. Academically, the term ephemeral constitutionally describes a diverse assortment of things and experiences, f ...
environments, cold seeps emit at a slow and dependable rate. Likely owing to the cooler temperatures and stability, many cold seep organisms are much longer-lived than those inhabiting hydrothermal vents.


End of cold seep community

Finally, as cold seeps become inactive, tubeworms also start to disappear, clearing the way for
coral Corals are marine invertebrates within the class Anthozoa of the phylum Cnidaria. They typically form compact colonies of many identical individual polyps. Coral species include the important reef builders that inhabit tropical oceans and se ...
s to settle on the now exposed carbonate substrate. The corals do not rely on hydrocarbons seeping out of the seafloor. Studies on ''
Lophelia pertusa ''Lophelia pertusa'', the only species in the genus ''Lophelia'', is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although ''L. pertusa'' reefs are h ...
'' suggest they derive their nutrition primarily from the ocean surface. Chemosynthesis plays only a very small role, if any, in their settlement and growth. While deepwater corals do not seem to be chemosynthesis-based organisms, the chemosynthetic organisms that come before them enable the corals' existence. This hypothesis about establishment of
deep water coral The habitat of deep-water corals, also known as cold-water corals, extends to deeper, darker parts of the oceans than tropical corals, ranging from near the surface to the abyss, beyond where water temperatures may be as cold as . Deep-water co ...
reefs is called hydraulic theory.


Distribution

Cold seeps were discovered in 1983 by Charles Paull and colleagues on the Florida Escarpment in the
Gulf of Mexico The Gulf of Mexico ( es, Golfo de México) is an ocean basin and a marginal sea of the Atlantic Ocean, largely surrounded by the North American continent. It is bounded on the northeast, north and northwest by the Gulf Coast of the United ...
at a depth of . Since then, seeps have been discovered in many other parts of the world's oceans. Most have been grouped into five
biogeographic Biogeography is the study of the distribution of species and ecosystems in geographic space and through geological time. Organisms and biological communities often vary in a regular fashion along geographic gradients of latitude, elevation, ...
provinces: Gulf of Mexico, Atlantic, Mediterranean, East Pacific and West Pacific, but cold seeps are also known from under the
ice shelf An ice shelf is a large floating platform of ice that forms where a glacier or ice sheet flows down to a coastline and onto the ocean surface. Ice shelves are only found in Antarctica, Greenland, Northern Canada, and the Russian Arctic. The ...
in
Antarctica Antarctica () is Earth's southernmost and least-populated continent. Situated almost entirely south of the Antarctic Circle and surrounded by the Southern Ocean, it contains the geographic South Pole. Antarctica is the fifth-largest cont ...
, the
Arctic Ocean The Arctic Ocean is the smallest and shallowest of the world's five major oceans. It spans an area of approximately and is known as the coldest of all the oceans. The International Hydrographic Organization (IHO) recognizes it as an ocean, a ...
,
North Sea The North Sea lies between Great Britain, Norway, Denmark, Germany, the Netherlands and Belgium. An epeiric sea on the European continental shelf, it connects to the Atlantic Ocean through the English Channel in the south and the Norwegian ...
,
Skagerrak The Skagerrak (, , ) is a strait running between the Jutland peninsula of Denmark, the southeast coast of Norway and the west coast of Sweden, connecting the North Sea and the Kattegat sea area through the Danish Straits to the Baltic Sea. T ...
,
Kattegat The Kattegat (; sv, Kattegatt ) is a sea area bounded by the Jutlandic peninsula in the west, the Danish Straits islands of Denmark and the Baltic Sea to the south and the provinces of Bohuslän, Västergötland, Halland and Skåne in Sweden ...
,
Gulf of California The Gulf of California ( es, Golfo de California), also known as the Sea of Cortés (''Mar de Cortés'') or Sea of Cortez, or less commonly as the Vermilion Sea (''Mar Bermejo''), is a marginal sea of the Pacific Ocean that separates the Baja C ...
, the
Red Sea The Red Sea ( ar, البحر الأحمر - بحر القلزم, translit=Modern: al-Baḥr al-ʾAḥmar, Medieval: Baḥr al-Qulzum; or ; Coptic: ⲫⲓⲟⲙ ⲛ̀ϩⲁϩ ''Phiom Enhah'' or ⲫⲓⲟⲙ ⲛ̀ϣⲁⲣⲓ ''Phiom ǹšari''; ...
, Indian Ocean, off
southern Australia The term Southern Australia is generally considered to refer to the states and territories of Australia of New South Wales, Victoria, Tasmania, the Australian Capital Territory and South Australia. The part of Western Australia south of lat ...
and in the inland
Caspian Sea The Caspian Sea is the world's largest inland body of water, often described as the world's largest lake or a full-fledged sea. An endorheic basin, it lies between Europe and Asia; east of the Caucasus, west of the broad steppe of Central A ...
. With the recent discovery of a methane seep in the
Southern Ocean The Southern Ocean, also known as the Antarctic Ocean, comprises the southernmost waters of the World Ocean, generally taken to be south of 60° S latitude and encircling Antarctica. With a size of , it is regarded as the second-smal ...
, cold seeps are now known in all major oceans. Cold seeps are common along continental margins in areas of high primary productivity and tectonic activity, where crustal deformation and compaction drive emissions of methane rich fluid. Cold seeps are patchily distributed and they occur most frequently near ocean margins from
intertidal The intertidal zone, also known as the foreshore, is the area above water level at low tide and underwater at high tide (in other words, the area within the tidal range). This area can include several types of habitats with various species ...
to hadal depths. In Chile cold seeps are known from the intertidal zone, in Kattegat the methane seeps are known as "bubbling reefs" and are typically at depths of , and off northern California they can be found as shallow as . Most cold seeps are located considerably deeper, well beyond the reach of ordinary
scuba diving Scuba diving is a mode of underwater diving whereby divers use breathing equipment that is completely independent of a surface air supply. The name "scuba", an acronym for " Self-Contained Underwater Breathing Apparatus", was coined by Chr ...
, and the deepest seep community known is found in the
Japan Trench The Japan Trench is an oceanic trench part of the Pacific Ring of Fire off northeast Japan. It extends from the Kuril Islands to the northern end of the Izu Islands, and is at its deepest. It links the Kuril–Kamchatka Trench to the north and ...
at a depth of . In addition to cold seeps existing today, the fossil remains of ancient seep systems have been found in several parts of the world. Some of these are located far inland in places formerly covered by prehistoric oceans.


In the Gulf of Mexico


Discoveries

The chemosynthetic communities of the Gulf of Mexico have been studied extensively since the 1990s, and communities first discovered on the upper slope are likely the best understood seep communities in the world. The history of the discovery of these remarkable animals has all occurred since the 1980s. Each major discovery was unexpected―from the first hydrothermal vent communities anywhere in the world to the first cold seep communities in the Gulf of Mexico. Communities were discovered in the Eastern Gulf of Mexico in 1983 using the manned submersible ''
DSV Alvin ''Alvin'' (DSV-2) is a crewed deep-ocean research submersible owned by the United States Navy and operated by the Woods Hole Oceanographic Institution (WHOI) in Woods Hole, Massachusetts. The vehicle was built by General Mills' Electronics Gro ...
'', during a cruise investigating the bottom of the Florida Escarpment in areas of "cold" brine seepage, where they unexpectedly discovered tubeworms and mussels (Paull et al., 1984). Two groups fortuitously discovered chemosynthetic communities in the Central Gulf of Mexico concurrently in November 1984. During investigations by
Texas A&M University Texas A&M University (Texas A&M, A&M, or TAMU) is a public university, public, Land-grant university, land-grant, research university in College Station, Texas. It was founded in 1876 and became the flagship institution of the Texas A&M Unive ...
to determine the effects of
oil seep A petroleum seep is a place where natural liquid or gaseous hydrocarbons escape to the earth's atmosphere and surface, normally under low pressure or flow. Seeps generally occur above either terrestrial or offshore petroleum accumulation stru ...
age on benthic ecology (until this investigation, all effects of oil seepage were assumed to be detrimental), bottom trawls unexpectedly recovered extensive collections of chemosynthetic organisms, including tube worms and clams (Kennicutt et al., 1985). At the same time, LGL Ecological Research Associates was conducting a research cruise as part of the multiyear MMS Northern Gulf of Mexico Continental Slope Study (Gallaway et al., 1988). Bottom photography (processed on board the vessel) resulted in clear images of vesicomyid clam chemosynthetic communities coincidentally in the same manner as the first discovery by camera sled in the Pacific in 1977. Photography during the same LGL/MMS cruise also documented tube-worm communities in situ in the Central Gulf of Mexico for the first time (not processed until after the cruise; Boland, 1986) prior to the initial submersible investigations and firsthand descriptions of Bush Hill () in 1986 (Rosman et al., 1987a; MacDonald et al., 1989b). The site was targeted by acoustic "wipeout" zones or lack of substrate structure caused by seeping hydrocarbons. This was determined using an acoustic pinger system during the same cruise on the R/V ''Edwin Link'' (the old one, only 113 ft (34 m)), which used one of the ''
Johnson Sea Link ''Johnson Sea Link'' was a type of deep-sea scientific research submersible built by Edwin Albert Link. Link built the first submersible, ''Johnson Sea Link I'', in 1971 at the request of his friend Seward Johnson, founder of the Harbor Branch O ...
'' submersibles. The site is characterized by dense tubeworm and mussel accumulations, as well as exposed carbonate outcrops with numerous
gorgonia ''Gorgonia'' is a genus of soft corals, sea fans in the family Gorgoniidae. Species The World Register of Marine Species lists these species In biology, a species is the basic unit of classification and a taxonomic rank of an organi ...
n and ''
Lophelia ''Lophelia pertusa'', the only species in the genus ''Lophelia'', is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although ''L. pertusa'' reefs are h ...
'' coral colonies. Bush Hill has become one of the most thoroughly studied chemosynthetic sites in the world.


Distribution

There is a clear relationship between known hydrocarbon discoveries at great depth in the Gulf slope and chemosynthetic communities, hydrocarbon seepage, and
authigenic Authigenesis is the process whereby a mineral or sedimentary rock deposit is generated where it is found or observed. Such deposits are described as authigenic. Authigenic sedimentary minerals form during sedimentation by precipitation or rec ...
minerals including carbonates at the seafloor (Sassen et al., 1993a and b). While the hydrocarbon reservoirs are broad areas several kilometers beneath the Gulf, chemosynthetic communities occur in isolated areas with thin veneers of sediment only a few meters thick. The northern Gulf of Mexico slope includes a stratigraphic section more than 10 km (6 mi) thick and has been profoundly influenced by salt movement.
Mesozoic The Mesozoic Era ( ), also called the Age of Reptiles, the Age of Conifers, and colloquially as the Age of the Dinosaurs is the second-to-last era of Earth's geological history, lasting from about , comprising the Triassic, Jurassic and Cretace ...
source rocks from
Upper Jurassic The Late Jurassic is the third epoch of the Jurassic Period, and it spans the geologic time from 163.5 ± 1.0 to 145.0 ± 0.8 million years ago (Ma), which is preserved in Upper Jurassic strata.Owen 1987. In European lithostratigraphy, the name ...
to
Upper Cretaceous The Late Cretaceous (100.5–66 Ma) is the younger of two epochs into which the Cretaceous Period is divided in the geologic time scale. Rock strata from this epoch form the Upper Cretaceous Series. The Cretaceous is named after ''creta'', ...
generate oil in most of the Gulf slope fields (Sassen et al., 1993a and b). Migration conduits supply fresh hydrocarbon materials through a vertical scale of 6–8 km (4–5 mi) toward the surface. The surface expressions of hydrocarbon migration are referred to as seeps. Geological evidence demonstrates that hydrocarbon and brine seepage persists in spatially discrete areas for thousands of years. The time scale for oil and gas migration (combination of buoyancy and pressure) from source systems is on the scale of millions of years (Sassen, 1997). Seepage from hydrocarbon sources through faults towards the surface tends to be diffused through the overlying sediment, carbonate outcroppings, and
hydrate In chemistry, a hydrate is a substance that contains water or its constituent elements. The chemical state of the water varies widely between different classes of hydrates, some of which were so labeled before their chemical structure was understo ...
deposits so the corresponding hydrocarbon seep communities tend to be larger (a few hundred meters wide) than chemosynthetic communities found around the hydrothermal vents of the
Eastern Pacific The Pacific Ocean is the largest and deepest of Earth's five oceanic divisions. It extends from the Arctic Ocean in the north to the Southern Ocean (or, depending on definition, to Antarctica) in the south, and is bounded by the contine ...
(MacDonald, 1992). There are large differences in the concentrations of hydrocarbons at seep sites. Roberts (2001) presented a spectrum of responses to be expected under a variety of flux rate conditions varying from very slow seepage to rapid venting. Very slow seepage sites do not support complex chemosynthetic communities; rather, they usually only support simple microbial mats (''
Beggiatoa ''Beggiatoa'' is a genus of '' Gammaproteobacteria'' belonging the order ''Thiotrichales,'' in the '' Pseudomonadota'' phylum. This genus was one of the first bacteria discovered by Ukrainian botanist Sergei Winogradsky. During his research in ...
'' sp.). In the upper slope environment, the hard substrates resulting from carbonate precipitation can have associated communities of nonchemosynthetic animals, including a variety of sessile
cnidarian Cnidaria () is a phylum under kingdom Animalia containing over 11,000 species of aquatic animals found both in freshwater and marine environments, predominantly the latter. Their distinguishing feature is cnidocytes, specialized cells that th ...
s such as
coral Corals are marine invertebrates within the class Anthozoa of the phylum Cnidaria. They typically form compact colonies of many identical individual polyps. Coral species include the important reef builders that inhabit tropical oceans and se ...
s and
sea anemone Sea anemones are a group of predatory marine invertebrates of the order Actiniaria. Because of their colourful appearance, they are named after the '' Anemone'', a terrestrial flowering plant. Sea anemones are classified in the phylum Cnidaria, ...
s. At the rapid flux end of the spectrum fluidized sediment generally accompanies hydrocarbons and formation fluids arriving at the seafloor.
Mud volcano A mud volcano or mud dome is a landform created by the eruption of mud or slurries, water and gases. Several geological processes may cause the formation of mud volcanoes. Mud volcanoes are not true igneous volcanoes as they do not produce ...
es and
mud flow A mudflow or mud flow is a form of mass wasting involving fast-moving flow of debris that has become liquified by the addition of water. Such flows can move at speeds ranging from 3 meters/minute to 5 meters/second. Mudflows contain a significa ...
s result. Somewhere between these two end members exists the conditions that support densely populated and diverse communities of chemosynthetic organisms (microbial mats,
siboglinid Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
tube worms, bathymodioline mussels, lucinid and vesycomyid clams, and associated organisms). These areas are frequently associated with surface or near-surface
gas hydrate Clathrate hydrates, or gas hydrates, clathrates, hydrates, etc., are crystalline water-based solids physically resembling ice, in which small non-polar molecules (typically gases) or polar molecules with large hydrophobic moieties are trapped ...
deposits. They also have localized areas of lithified seafloor, generally authigenic carbonates but sometimes more exotic minerals such as
barite Baryte, barite or barytes ( or ) is a mineral consisting of barium sulfate ( Ba S O4). Baryte is generally white or colorless, and is the main source of the element barium. The ''baryte group'' consists of baryte, celestine (strontium sulfate), ...
are present. The widespread nature of Gulf of Mexico chemosynthetic communities was first documented during contracted investigations by the Geological and Environmental Research Group (GERG) of Texas A&M University for the Offshore Operators Committee (Brooks et al., 1986). This survey remains the most widespread and comprehensive, although numerous additional communities have been documented since that time. Industry exploring for energy reserves in the Gulf of Mexico has also documented numerous new communities through a wide range of depths, including the deepest known occurrence in the Central Gulf of Mexico in Alaminos Canyon Block 818 at a depth of 2,750 m (9,022 ft). The occurrence of chemosynthetic organisms dependent on hydrocarbon seepage has been documented in water depths as shallow as 290 m (951 ft) (Roberts et al., 1990) and as deep as 2,744 m (9,003 ft). This depth range specifically places chemosynthetic communities in the deepwater region of the Gulf of Mexico, which is defined as water depths greater than 305 m (1,000 ft). Chemosynthetic communities are not found on the
continental shelf A continental shelf is a portion of a continent that is submerged under an area of relatively shallow water, known as a shelf sea. Much of these shelves were exposed by drops in sea level during glacial periods. The shelf surrounding an island ...
although they do appear in the fossil record in water shallower than 200 m (656 ft). One theory explaining this is that
predation Predation is a biological interaction where one organism, the predator, kills and eats another organism, its prey. It is one of a family of common feeding behaviours that includes parasitism and micropredation (which usually do not kill ...
pressure has varied substantially over the time period involved (Callender and Powell 1999). More than 50 communities are now known to exist in 43
Outer Continental Shelf The Outer Continental Shelf (OCS) is a feature of the geography of the United States. The OCS is the part of the internationally recognized continental shelf of the United States which does not fall under the jurisdictions of the individual U. ...
(OCS) blocks. Although a systematic survey has not been done to identify all chemosynthetic communities in the Gulf of Mexico, there is evidence indicating that many more such communities may exist. The depth limits of discoveries probably reflect the limits of exploration (lack of
submersibles A submersible is a small watercraft designed to operate underwater. The term "submersible" is often used to differentiate from other underwater vessels known as submarines, in that a submarine is a fully self-sufficient craft, capable of ind ...
capable of depths over 1,000 m (3,281 ft)). MacDonald et al. (1993 and 1996) have analyzed remote-sensing images from space that reveal the presence of
oil slick An oil spill is the release of a liquid petroleum hydrocarbon into the environment, especially the marine ecosystem, due to human activity, and is a form of pollution. The term is usually given to marine oil spills, where oil is released into th ...
s across the north-central Gulf of Mexico. Results confirmed extensive natural oil seepage in the Gulf of Mexico, especially in water depths greater than 1,000 m (3,281 ft). A total of 58 additional potential locations were documented where seafloor sources were capable of producing perennial oil slicks (MacDonald et al., 1996). Estimated seepage rates ranged from to compared to less than for ship discharges (both normalized for 1,000 mi2 (640,000 ac)). This evidence considerably increases the area where chemosynthetic communities dependent on hydrocarbon seepage may be expected. The densest aggregations of chemosynthetic organisms have been found at water depths of around 500 m (1,640 ft) and deeper. The best known of these communities was named Bush Hill by the investigators who first described it (MacDonald et al., 1989b). It is a surprisingly large and dense community of chemosynthetic tube worms and mussels at a site of natural petroleum and gas seepage over a salt diapir in Green Canyon Block 185. The seep site is a small knoll that rises about 40 m (131 ft) above the surrounding seafloor in about 580-m (1,903-ft) water depth.


Stability

According to Sassen (1997) the role of
hydrate In chemistry, a hydrate is a substance that contains water or its constituent elements. The chemical state of the water varies widely between different classes of hydrates, some of which were so labeled before their chemical structure was understo ...
s at chemosynthetic communities has been greatly underestimated. The biological alteration of frozen
gas hydrate Clathrate hydrates, or gas hydrates, clathrates, hydrates, etc., are crystalline water-based solids physically resembling ice, in which small non-polar molecules (typically gases) or polar molecules with large hydrophobic moieties are trapped ...
s was first discovered during the MMS study entitled "Stability and Change in Gulf of Mexico Chemosynthetic Communities". It is hypothesized (MacDonald, 1998b) that the dynamics of hydrate alteration could play a major role as a mechanism for regulation of the release of hydrocarbon gases to fuel biogeochemical processes and could also play a substantial role in community stability. Recorded bottom-water temperature excursions of several degrees in some areas such as the Bush Hill site (4–5 °C at 500-m (1,640-ft) depth) are believed to result in dissociation of hydrates, resulting in an increase in gas fluxes (MacDonald et al., 1994). Although not as destructive as the
volcanism Volcanism, vulcanism or volcanicity is the phenomenon of eruption of molten rock (magma) onto the surface of the Earth or a solid-surface planet or moon, where lava, pyroclastics, and volcanic gases erupt through a break in the surface called a ...
at vent sites of the
mid-ocean ridge A mid-ocean ridge (MOR) is a seafloor mountain system formed by plate tectonics. It typically has a depth of about and rises about above the deepest portion of an ocean basin. This feature is where seafloor spreading takes place along a div ...
s, the dynamics of shallow hydrate formation and movement will clearly affect
sessile animals Sessility is the biological property of an organism describing its lack of a means of self-locomotion. Sessile organisms for which natural ''motility'' is absent are normally immobile. This is distinct from the botanical concept of sessility, w ...
that form part of the seepage barrier. There is potential of a catastrophic event where an entire layer of shallow hydrate could break free of the bottom and considerably affect local communities of chemosynthetic fauna. At deeper depths (>1,000 m, >3,281 ft), the bottom-water temperature is colder (by approximately 3 °C) and undergoes less fluctuation. The formation of more stable and probably deeper hydrates influences the flux of light hydrocarbon gases to the sediment surface, thus influencing the surface morphology and characteristics of chemosynthetic communities. Within complex communities such as Bush Hill,
petroleum Petroleum, also known as crude oil, or simply oil, is a naturally occurring yellowish-black liquid mixture of mainly hydrocarbons, and is found in geological formations. The name ''petroleum'' covers both naturally occurring unprocessed crud ...
seems less important than previously thought (MacDonald, 1998b). Through
taphonomic Taphonomy is the study of how organisms decay and become fossilized or preserved in the paleontological record. The term ''taphonomy'' (from Greek , 'burial' and , 'law') was introduced to paleontology in 1940 by Soviet scientist Ivan Efremov t ...
studies (death assemblages of shells) and interpretation of seep assemblage composition from cores, Powell et al. (1998) reported that, overall, seep communities were persistent over periods of 500–1,000 years and probably throughout the entire
Pleistocene The Pleistocene ( , often referred to as the ''Ice age'') is the geological Epoch (geology), epoch that lasted from about 2,580,000 to 11,700 years ago, spanning the Earth's most recent period of repeated glaciations. Before a change was fina ...
(<- doubtful.
Holocene The Holocene ( ) is the current geological epoch. It began approximately 11,650 cal years Before Present (), after the Last Glacial Period, which concluded with the Holocene glacial retreat. The Holocene and the preceding Pleistocene togeth ...
?). Some sites retained optimal
habitat In ecology, the term habitat summarises the array of resources, physical and biotic factors that are present in an area, such as to support the survival and reproduction of a particular species. A species habitat can be seen as the physical ...
over
geological time scale The geologic time scale, or geological time scale, (GTS) is a representation of time based on the rock record of Earth. It is a system of chronological dating that uses chronostratigraphy (the process of relating strata to time) and geochro ...
s. Powell reported evidence of mussel and clam communities persisting in the same sites for 500-4,000 years. Powell also found that both the composition of species and
trophic Trophic, from Ancient Greek τροφικός (''trophikos'') "pertaining to food or nourishment", may refer to: * Trophic cascade * Trophic coherence * Trophic egg * Trophic function * Trophic hormone * Trophic level index * Trophic level ...
tiering of hydrocarbon seep communities tend to be fairly constant across time, with temporal variations only in numerical abundance. He found few cases in which the community type changed (from mussel to clam communities, for example) or had disappeared completely. Faunal
succession Succession is the act or process of following in order or sequence. Governance and politics *Order of succession, in politics, the ascension to power by one ruler, official, or monarch after the death, resignation, or removal from office of ...
was not observed. Surprisingly, when recovery occurred after a past destructive event, the same chemosynthetic species reoccupied a site. There was little evidence of catastrophic burial events, but two instances were found in mussel communities in Green Canyon Block 234. The most notable observation reported by Powell (1995) was the uniqueness of each chemosynthetic community site. Precipitation of
authigenic Authigenesis is the process whereby a mineral or sedimentary rock deposit is generated where it is found or observed. Such deposits are described as authigenic. Authigenic sedimentary minerals form during sedimentation by precipitation or rec ...
carbonates and other geologic events will undoubtedly alter surface seepage patterns over periods of many years, although through direct observation, no changes in chemosynthetic fauna distribution or composition were observed at seven separate study sites (MacDonald et al., 1995). A slightly longer period (19 years) can be referenced in the case of Bush Hill, the first Central Gulf of Mexico community described ''
in situ ''In situ'' (; often not italicized in English) is a Latin phrase that translates literally to "on site" or "in position." It can mean "locally", "on site", "on the premises", or "in place" to describe where an event takes place and is used in ...
'' in 1986. No mass die-offs or large-scale shifts in faunal composition have been observed (with the exception of collections for scientific purposes) over the 19-year history of research at this site. All chemosynthetic communities are located in water depths beyond the effect of severe storms, including hurricanes, and there would have been no alteration of these communities caused from surface storms, including
hurricane A tropical cyclone is a rapidly rotating storm system characterized by a low-pressure center, a closed low-level atmospheric circulation, strong winds, and a spiral arrangement of thunderstorms that produce heavy rain and squalls. Dep ...
s.


Biology

MacDonald et al. (1990) has described four general community types. These are communities dominated by
Vestimentifera Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
n tube worms ('' Lamellibrachia'' c.f. '' barhami'' and '' Escarpia'' spp.), mytilid mussels (Seep Mytilid Ia, Ib, and III, and others), vesicomyid clams (''Vesicomya cordata'' and ''Calyptogena ponderosa''), and infaunal lucinid or thyasirid clams (''
Lucinoma ''Lucinoma'' is a genus of saltwater clams, marine bivalve molluscs in the subfamily Codakiinae of the family Lucinidae Lucinidae, common name hatchet shells, is a family of saltwater clams, marine bivalve molluscs. These bivalves are rem ...
'' sp. or '' Thyasira'' sp.).
Bacterial mat A biofilm comprises any syntrophic consortium of microorganisms in which cells stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular po ...
s are present at all sites visited to date. These faunal groups tend to display distinctive characteristics in terms of how they aggregate, the size of aggregations, the geological and chemical properties of the habitats in which they occur and, to some degree, the heterotrophic fauna that occur with them. Many of the species found at these cold seep communities in the Gulf of Mexico are new to science and remain undescribed. Individual lamellibranchid tube worms, the longer of two taxa found at seeps can reach lengths of 3 m (10 ft) and live hundreds of years (Fisher et al., 1997; Bergquist et al., 2000). Growth rates determined from recovered marked tube worms have been variable, ranging from no growth of 13 individuals measured one year to a maximum growth of 9.6 cm/yr (3.8 in/yr) in a '' Lamellibrachia'' individual (MacDonald, 2002). Average growth rate was 2.19 cm/yr (0.86 in/yr) for the '' Escarpia''-like species and 2.92 cm/yr (1.15 in/yr) for lamellibrachids. These are slower growth rates than those of their
hydrothermal vent A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspo ...
relatives, but ''Lamellibrachia'' individuals can reach lengths 2–3 times that of the largest known hydrothermal vent species. Individuals of ''Lamellibrachia'' sp. in excess of 3 m (10 ft) have been collected on several occasions, representing probable ages in excess of 400 years (Fisher, 1995). Vestimentiferan tube worm spawning is not seasonal and recruitment is episodic. Tubeworms are either male or female. One recent discovery indicates that the spawning of female ''Lamellibrachia'' appears to have produced a unique association with the large bivalve ''Acesta bullisi'', which lives permanently attached to the anterior tube opening of the tubeworm, and feeds on the periodic egg release (Järnegren et al., 2005). This close association between the bivalves and tubeworms was discovered in 1984 (Boland, 1986) but not fully explained. Virtually all mature '' Acesta'' individuals are found on female rather than male tubeworms. This evidence and other experiments by Järnegren et al. (2005) seem to have solved this mystery. Growth rates for methanotrophic mussels at cold seep sites have been reported (Fisher, 1995). General growth rates were found to be relatively high. Adult mussel growth rates were similar to mussels from a littoral environment at similar temperatures. Fisher also found that juvenile mussels at hydrocarbon seeps initially grow rapidly, but the growth rate drops markedly in adults; they grow to reproductive size very quickly. Both individuals and communities appear to be very long lived. These
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
-dependent mussels have strict chemical requirements that tie them to areas of the most active seepage in the Gulf of Mexico. As a result of their rapid growth rates, mussel recolonization of a disturbed seep site could occur relatively rapidly. There is some evidence that mussels also have some requirement of a hard substrate and could increase in numbers if suitable substrate is increased on the seafloor (Fisher, 1995). Two associated species are always found associated with mussel beds – the gastropod ''
Bathynerita naticoidea ''Bathynerita naticoidea'' is a species of small sea snail, a marine gastropod mollusc in the family Neritidae, the nerites. This species is endemic to underwater cold seeps (oil seeps and gas seeps) in the northern Gulf of Mexico and in the C ...
'' and a small Alvinocarid shrimp – suggesting these endemic species have excellent dispersal abilities and can tolerate a wide range of conditions (MacDonald, 2002). Unlike mussel beds, chemosynthetic clam beds may persist as a visual surface phenomenon for an extended period without input of new living individuals because of low dissolution rates and low sedimentation rates. Most clam beds investigated by Powell (1995) were inactive. Living individuals were rarely encountered. Powell reported that over a 50-year timespan, local extinctions and recolonization should be gradual and exceedingly rare. Contrasting these inactive beds, the first community discovered in the Central Gulf of Mexico consisted of numerous actively plowing clams. The images obtained of this community were used to develop length/frequency and live/dead ratios as well as spatial patterns (Rosman et al., 1987a). Extensive
bacterial mat A biofilm comprises any syntrophic consortium of microorganisms in which cells stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular po ...
s of free-living
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
are also evident at all hydrocarbon seep sites. These bacteria may compete with the major fauna for
sulfide Sulfide (British English also sulphide) is an inorganic anion of sulfur with the chemical formula S2− or a compound containing one or more S2− ions. Solutions of sulfide salts are corrosive. ''Sulfide'' also refers to chemical compounds la ...
and
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane ...
energy sources and may also contribute substantially to overall production (MacDonald, 1998b). The white, nonpigmented mats were found to be an autotrophic sulfur bacteria ''
Beggiatoa ''Beggiatoa'' is a genus of '' Gammaproteobacteria'' belonging the order ''Thiotrichales,'' in the '' Pseudomonadota'' phylum. This genus was one of the first bacteria discovered by Ukrainian botanist Sergei Winogradsky. During his research in ...
'' species, and the orange mats possessed an unidentified nonchemosynthetic metabolism (MacDonald, 1998b). Heterotrophic species at seep sites are a mixture of species unique to seeps (particularly
molluscs Mollusca is the second-largest phylum of invertebrate animals after the Arthropoda, the members of which are known as molluscs or mollusks (). Around 85,000 extant species of molluscs are recognized. The number of fossil species is estim ...
and
crustacean Crustaceans (Crustacea, ) form a large, diverse arthropod taxon which includes such animals as decapoda, decapods, ostracoda, seed shrimp, branchiopoda, branchiopods, argulidae, fish lice, krill, remipedes, isopoda, isopods, barnacles, copepods, ...
invertebrates) and those that are a normal component from the surrounding environment. Carney (1993) first reported a potential imbalance that could occur as a result of chronic disruption. Because of sporadic recruitment patterns, predators could gain an advantage, resulting in exterminations in local populations of mussel beds. It is clear that seep systems do interact with the background fauna but conflicting evidence remains as to what degree outright predation on some specific community components such as tubeworms occurs (MacDonald, 2002). The more surprising results from this recent work is why background species do not utilize seep production more than seems to be evident. In fact, seep-associated consumers such as galatheid crabs and
nerite Neritidae, common name the nerites, is a taxonomic family of small to medium-sized saltwater and freshwater snails which have a gill and a distinctive operculum. MolluscaBase eds. (2021). MolluscaBase. Neritininae Poey, 1852. Accessed through: ...
gastropods had isotopic signatures, indicating that their diets were a mixture of seep and background production. At some sites,
endemic Endemism is the state of a species being found in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also found else ...
seep invertebrates that would have been expected to obtain much if not all their diet from seep production actually consumed as much as 50 percent of their diets from the background.


In the Atlantic Ocean

Cold-seep communities in the western
Atlantic Ocean The Atlantic Ocean is the second-largest of the world's five oceans, with an area of about . It covers approximately 20% of Earth's surface and about 29% of its water surface area. It is known to separate the " Old World" of Africa, Europe ...
have also been described from a few dives on mud volcanoes and diapirs between depth in the
Barbados Barbados is an island country in the Lesser Antilles of the West Indies, in the Caribbean region of the Americas, and the most easterly of the Caribbean Islands. It occupies an area of and has a population of about 287,000 (2019 estima ...
accretionary prism area and from the
Blake Ridge The Blake Plateau lies in the western Atlantic Ocean off the southeastern United States coasts of North Carolina, South Carolina, Georgia and Florida. The Blake Plateau lies between the North American continental shelf and the deep ocean basin e ...
diapir off
North Carolina North Carolina () is a U.S. state, state in the Southeastern United States, Southeastern region of the United States. The state is the List of U.S. states and territories by area, 28th largest and List of states and territories of the United ...
. More recently seep communities have been discovered in the eastern Atlantic, on a giant pockmark cluster in the
Gulf of Guinea The Gulf of Guinea is the northeasternmost part of the tropical Atlantic Ocean from Cape Lopez in Gabon, north and west to Cape Palmas in Liberia. The intersection of the Equator and Prime Meridian (zero degrees latitude and longitude) is i ...
near the Congo deep channel, also on other pockmarks of the Congo margin,
Gabon Gabon (; ; snq, Ngabu), officially the Gabonese Republic (french: République gabonaise), is a country on the west coast of Central Africa. Located on the equator, it is bordered by Equatorial Guinea to the northwest, Cameroon to the nort ...
margin and
Nigeria Nigeria ( ), , ig, Naìjíríyà, yo, Nàìjíríà, pcm, Naijá , ff, Naajeeriya, kcg, Naijeriya officially the Federal Republic of Nigeria, is a country in West Africa. It is situated between the Sahel to the north and the Gulf o ...
margin and in the
Gulf of Cádiz The Gulf of Cádiz ( es, Golfo de Cádiz, pt, Golfo de Cádis) is the arm of the Atlantic Ocean between Cabo de Santa Maria, the southernmost point of mainland Portugal and Cape Trafalgar at the western end of the Strait of Gibraltar. Two m ...
. The occurrence of chemosymbiotic biota in the extensive mud volcano fields of the Gulf of Cádiz was first reported in 2003. The chemosymbiotic
bivalve Bivalvia (), in previous centuries referred to as the Lamellibranchiata and Pelecypoda, is a class (biology), class of marine and freshwater Mollusca, molluscs that have laterally compressed bodies enclosed by a shell consisting of two hing ...
s collected from the mud volcanoes of the Gulf of Cadiz were reviewed in 2011. Cold seeps are also known from the Northern Atlantic Ocean, even ranging into the Arctic Ocean, off Canada and
Norway Norway, officially the Kingdom of Norway, is a Nordic countries, Nordic country in Northern Europe, the mainland territory of which comprises the western and northernmost portion of the Scandinavian Peninsula. The remote Arctic island of ...
. Extensive faunal sampling has been conducted from in the Atlantic Equatorial Belt from the Gulf of Mexico to the Gulf of Guinea including Barbados accretionary prism, the Blake Ridge diapir, and in the Eastern Atlantic from the Congo and Gabon margins and the recently explored Nigeria margin during
Census of Marine Life The Census of Marine Life was a 10-year, US $650 million scientific initiative, involving a global network of researchers in more than 80 nations, engaged to assess and explain the diversity, distribution, and abundance of life in the oceans. Th ...
ChEss Chess is a board game for two players, called White and Black, each controlling an army of chess pieces in their color, with the objective to checkmate the opponent's king. It is sometimes called international chess or Western chess to dist ...
project. Of the 72 taxa identified at the species level, a total of 9 species or species complexes are identified as amphi-Atlantic. The Atlantic Equatorial Belt seep megafauna community structure is influenced primarily by depth rather than by geographic distance. The bivalves Bathymodiolinae (within
Mytilidae Mytilidae are a family of small to large marine and brackish-water bivalve molluscs in the order Mytilida. One of the genera, '' Limnoperna'', even inhabits freshwater environments. The order has only this one family which contains some 52 gener ...
) species or complexes of species are the most widespread in the Atlantic. The '' Bathymodiolus boomerang'' complex is found at the Florida escarpment site, the Blake Ridge diapir, the Barbados prism and the Regab site of Congo. The ''
Bathymodiolus childressi ''Bathymodiolus childressi'' is a species of deepwater mussel, a marine bivalve mollusk species in the family Mytilidae, the mussels. Although this species has been known since 1985,Childress J.J., Fisher C.R., Brooks J.M., Kennicutt M.C., II, ...
'' complex is also widely distributed along the Atlantic Equatorial Belt from the Gulf of Mexico across to the Nigerian Margin, although not on the Regab or Blake ridge sites. The commensal polynoid, '' Branchipolynoe seepensis'' is known from the Gulf of Mexico, Gulf of Guinea and Barbados. Other species with distributions extending from the eastern to western Atlantic are: gastropod '' Cordesia provannoides'', the shrimp '' Alvinocaris muricola'', the galatheids '' Munidopsis geyeri'' and '' Munidopsis livida'' and probably the holothurid ''
Chiridota heheva ''Chiridota heheva'' is a species of sea cucumber Sea cucumbers are echinoderms from the class Holothuroidea (). They are marine animals with a leathery skin and an elongated body containing a single, branched gonad. Sea cucumbers are found o ...
''. There have been found cold seeps also in the
Amazon Amazon most often refers to: * Amazons, a tribe of female warriors in Greek mythology * Amazon rainforest, a rainforest covering most of the Amazon basin * Amazon River, in South America * Amazon (company), an American multinational technolog ...
deepsea fan. High-resolution seismic profiles near the shelf edge show evidence of near-surface slumps and faulting in the subsurface and concentrations (about ) of methane gas. Several studies (e.g., Amazon Shelf Study— AMASEDS, LEPLAC, REMAC, GLORIA,
Ocean Drilling Program The Ocean Drilling Program (ODP) was a multinational effort to explore and study the composition and structure of the Earth's oceanic basins. ODP, which began in 1985, was the successor to the Deep Sea Drilling Project initiated in 1968 by th ...
) indicate that there is evidence for gas seepage on the slope off the Amazon fan based on the incidence of bottom-simulating reflections (BSRs), mud volcanoes, pock marks, gas in sediments, and deeper hydrocarbon occurrences. The existence of methane at relatively shallow depths and extensive areas of gas hydrates have been mapped in this region. Also, gas chimneys have been reported, and exploratory wells have discovered subcommercial gas accumulations and pock marks along fault planes. A sound geological and geophysical understanding of the Foz do Amazonas Basin is already available and used by the energy companies. Exploration of new areas, such as potential seep sites off of the east coast of the U.S. and the Laurentian fan where chemosynthetic communities are known deeper than , and shallower sites in the Gulf of Guinea are need to study in the future.


In the Mediterranean

The first biological evidence for reduced environments in the
Mediterranean Sea The Mediterranean Sea is a sea connected to the Atlantic Ocean, surrounded by the Mediterranean Basin and almost completely enclosed by land: on the north by Western and Southern Europe and Anatolia, on the south by North Africa, and on ...
was the presence of
Lucinidae Lucinidae, common name hatchet shells, is a family of saltwater clams, marine bivalve molluscs. These bivalves are remarkable for their endosymbiosis with sulphide-oxidizing bacteria. Characteristics The members of this family have a worldwi ...
and Vesicomyidae
bivalve shell A bivalve shell is part of the body, the exoskeleton or shell, of a bivalve mollusk. In life, the shell of this class of mollusks is composed of two hinged parts or ''valves''. Bivalves are very common in essentially all aquatic locales, includi ...
s cored on the top of the Napoli
mud volcano A mud volcano or mud dome is a landform created by the eruption of mud or slurries, water and gases. Several geological processes may cause the formation of mud volcanoes. Mud volcanoes are not true igneous volcanoes as they do not produce ...
(; "Napoli" is only a name of a seamount. It locates south of Crete), located at 1,900 m depth on the Mediterranean Ridge in the
subduction zone Subduction is a geological process in which the oceanic lithosphere is recycled into the Earth's mantle at convergent boundaries. Where the oceanic lithosphere of a tectonic plate converges with the less dense lithosphere of a second plate, the ...
of the
African plate The African Plate is a major tectonic plate that includes much of the continent of Africa (except for its easternmost part) and the adjacent oceanic crust to the west and south. It is bounded by the North American Plate and South American Plate ...
. This was followed by the description of a new Lucinidae bivalve species, '' Lucinoma kazani'', associated with bacterial
endosymbiont An ''endosymbiont'' or ''endobiont'' is any organism that lives within the body or cells of another organism most often, though not always, in a mutualistic relationship. (The term endosymbiosis is from the Greek: ἔνδον ''endon'' "within ...
s. In the southeastern Mediterranean, communities of
polychaete Polychaeta () is a paraphyletic class of generally marine annelid worms, commonly called bristle worms or polychaetes (). Each body segment has a pair of fleshy protrusions called parapodia that bear many bristles, called chaetae, which are made ...
s and bivalves were also found associated with cold seeps and carbonates near
Egypt Egypt ( ar, مصر , ), officially the Arab Republic of Egypt, is a List of transcontinental countries, transcontinental country spanning the North Africa, northeast corner of Africa and Western Asia, southwest corner of Asia via a land bridg ...
and the
Gaza Strip The Gaza Strip (;The New Oxford Dictionary of English (1998) – p.761 "Gaza Strip /'gɑːzə/ a strip of territory under the control of the Palestinian National Authority and Hamas, on the SE Mediterranean coast including the town of Gaza.. ...
at depths of 500–800 m, but no living fauna was collected. The first
in situ ''In situ'' (; often not italicized in English) is a Latin phrase that translates literally to "on site" or "in position." It can mean "locally", "on site", "on the premises", or "in place" to describe where an event takes place and is used in ...
observations of extensive living chemosynthetic communities in the Eastern Mediterranean Sea prompted cooperation between biologists,
geochemist Geochemistry is the science that uses the tools and principles of chemistry to explain the mechanisms behind major geological systems such as the Earth's crust and its oceans. The realm of geochemistry extends beyond the Earth, encompassing the ...
s, and geologists. During
submersible A submersible is a small watercraft designed to operate underwater. The term "submersible" is often used to differentiate from other underwater vessels known as submarines, in that a submarine is a fully self-sufficient craft, capable of i ...
dives, communities comprising large fields of small bivalves (dead and alive), large
siboglinid Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
tube worms, isolated or forming dense aggregations, large
sponge Sponges, the members of the phylum Porifera (; meaning 'pore bearer'), are a basal animal clade as a sister of the diploblasts. They are multicellular organisms that have bodies full of pores and channels allowing water to circulate throu ...
s, and associated endemic fauna were observed in various cold seep habitats associated with carbonate crusts at 1,700–2,000 m depth. Two mud volcano fields were first explored, one along the Mediterranean Ridge, where most of them were partially (Napoli, Milano mud volcanoes) or totally (Urania, Maidstone mud volcanoes) affected by brines, and the other on the Anaximander mounds south of
Turkey Turkey ( tr, Türkiye ), officially the Republic of Türkiye ( tr, Türkiye Cumhuriyeti, links=no ), is a transcontinental country located mainly on the Anatolian Peninsula in Western Asia, with a small portion on the Balkan Peninsula ...
. The latter area includes the large Amsterdam mud volcano, which is affected by recent
mudflow A mudflow or mud flow is a form of mass wasting involving fast-moving flow of debris that has become liquified by the addition of water. Such flows can move at speeds ranging from 3 meters/minute to 5 meters/second. Mudflows contain a significa ...
s, and the smaller Kazan or Kula mud volcanoes.
Gas hydrate Clathrate hydrates, or gas hydrates, clathrates, hydrates, etc., are crystalline water-based solids physically resembling ice, in which small non-polar molecules (typically gases) or polar molecules with large hydrophobic moieties are trapped ...
s have been sampled at the Amsterdam and Kazan mud volcanoes, and high methane levels have been recorded above the seafloor. Several provinces of the
Nile The Nile, , Bohairic , lg, Kiira , Nobiin: Áman Dawū is a major north-flowing river in northeastern Africa. It flows into the Mediterranean Sea. The Nile is the longest river in Africa and has historically been considered the longest riv ...
deep-sea fan have been explored recently. These include the very active brine seepage named the Menes Caldera in the eastern province between 2,500 m and 3,000 m, the pockmarks in the central area along mid- and lower slopes, and the mud volcanoes of the eastern province, as well as one in the central upper slope ( North Alex area) at 500 m depth. During these first exploratory dives, symbiont-bearing taxa that are similar to those observed on the Olimpi and Anaximander mud fields were sampled and identified. This similarity is not surprising, as most of these taxa were originally described from dredging in the Nile fan. Up to five species of bivalves harboring bacterial symbionts colonized these methane- and sulfide-rich environments. A new species of
Siboglinidae Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
polychaete, ''
Lamellibrachia anaximandri ''Lamellibrachia'' is a genus of tube worms related to the giant tube worm, ''Riftia pachyptila''. They live at deep-sea cold seeps where hydrocarbons (oil and methane) leak out of the seafloor, and are entirely reliant on internal, sulfide-oxi ...
'', the tubeworm colonizing cold seeps from the Mediterranean ridge to the Nile deep-sea fan, has just been described in 2010. Moreover, the study of symbioses revealed associations with chemoautotrophic Bacteria, sulfur oxidizers in Vesicomyidae and Lucinidae bivalves and Siboglinidae tubeworms, and highlighted the exceptional diversity of Bacteria living in symbiosis with small Mytilidae. The Mediterranean seeps appear to represent a rich habitat characterized by megafauna
species richness Species richness is the number of different species represented in an ecological community, landscape or region. Species richness is simply a count of species, and it does not take into account the abundances of the species or their relative ab ...
(e.g.,
gastropod The gastropods (), commonly known as snails and slugs, belong to a large taxonomic class of invertebrates within the phylum Mollusca called Gastropoda (). This class comprises snails and slugs from saltwater, from freshwater, and from land. T ...
s) or the exceptional size of some species such as sponges ('' Rhizaxinella pyrifera'') and crabs (''
Chaceon mediterraneus ''Chaceon'' is a crab genus in the family Geryonidae. Species * ''Chaceon affinis'' (A. Milne-Edwards & Bouvier, 1894) * '' Chaceon albus'' Davie, Ng & Dawson, 2007 * '' Chaceon alcocki'' Ghosh & Manning, 1993 * '' Chaceon atopus'' Manning & ...
''), compared with their background counterparts. This contrasts with the low macro- and mega-faunal abundance and diversity of the deep
Eastern Mediterranean Eastern Mediterranean is a loose definition of the eastern approximate half, or third, of the Mediterranean Sea, often defined as the countries around the Levantine Sea. It typically embraces all of that sea's coastal zones, referring to commun ...
. Seep communities in the Mediterranean that include endemic chemosynthetic species and associated fauna differ from the other known seep communities in the world at the species level but also by the absence of the large size bivalve genera ''
Calyptogena Vesicomyidae is a family of saltwater clams, marine bivalve molluscs in the superfamily Glossoidea. MolluscaBase eds. (2022). MolluscaBase. Vesicomyidae Dall & Simpson, 1901. Accessed through: World Register of Marine Species at: https://www.m ...
'' or ''
Bathymodiolus ''Bathymodiolus'' is a genus of deep-sea mussels, marine bivalve molluscs in the family Mytilidae. Many of them contain intracelluar chemoautotrophic bacterial symbionts. Species Modern (non-fossil) species within the genus ''Bathymodiolus'' i ...
''. The isolation of the Mediterranean seeps from the Atlantic Ocean after the Messinian crisis led to the development of unique communities, which are likely to differ in composition and structure from those in the Atlantic Ocean. Further expeditions involved quantitative sampling of habitats in different areas, from the Mediterranean Ridge to the eastern Nile deep-sea fan. Cold seeps discovered in the
Sea of Marmara The Sea of Marmara,; grc, Προποντίς, Προποντίδα, Propontís, Propontída also known as the Marmara Sea, is an inland sea located entirely within the borders of Turkey. It connects the Black Sea to the Aegean Sea via t ...
in 2008 have also revealed chemosynthesis-based communities that showed a considerable similarity to the symbiont-bearing fauna of eastern Mediterranean cold seeps.


In the Indian Ocean

In the
Makran Trench The Makran Trench is the physiographic expression of a subduction zone along the northeastern margin of the Gulf of Oman adjacent to the southwestern coast of Balochistan of Pakistan and the southeastern coast of Iran. In this region the ocean ...
, a subduction zone along the northeastern margin of the
Gulf of Oman The Gulf of Oman or Sea of Oman ( ar, خليج عمان ''khalīj ʿumān''; fa, دریای عمان ''daryâ-ye omân''), also known as Gulf of Makran or Sea of Makran ( ar, خلیج مکران ''khalīj makrān''; fa, دریای مکرا� ...
adjacent to the southwestern coast of
Pakistan Pakistan ( ur, ), officially the Islamic Republic of Pakistan ( ur, , label=none), is a country in South Asia. It is the world's List of countries and dependencies by population, fifth-most populous country, with a population of almost 24 ...
and the southeastern coast of
Iran Iran, officially the Islamic Republic of Iran, and also called Persia, is a country located in Western Asia. It is bordered by Iraq and Turkey to the west, by Azerbaijan and Armenia to the northwest, by the Caspian Sea and Turkmeni ...
, compression of an accretionary wedge has resulted in the formation of cold seeps and mud volcanoes.


In the West Pacific

Native
aluminium Aluminium (aluminum in American and Canadian English) is a chemical element with the symbol Al and atomic number 13. Aluminium has a density lower than those of other common metals, at approximately one third that of steel. It ha ...
has been reported also in cold seeps in the northeastern
continental slope A continental margin is the outer edge of continental crust abutting oceanic crust under coastal waters. It is one of the three major zones of the ocean floor, the other two being deep-ocean basins and mid-ocean ridges. The continental margin ...
of the
South China Sea The South China Sea is a marginal sea of the Western Pacific Ocean. It is bounded in the north by the shores of South China (hence the name), in the west by the Indochinese Peninsula, in the east by the islands of Taiwan and northwestern Ph ...
and Chen et al. (2011) have proposed a theory of its origin as resulting by reduction from tetrahydroxoaluminate Al(OH)4 to metallic aluminium by
bacteria Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were am ...
.


Japan

Deep sea communities around Japan are mainly researched by
Japan Agency for Marine-Earth Science and Technology Japan ( ja, 日本, or , and formally , ''Nihonkoku'') is an island country in East Asia. It is situated in the northwest Pacific Ocean, and is bordered on the west by the Sea of Japan, while extending from the Sea of Okhotsk in the north ...
(JAMSTEC).
DSV Shinkai 6500 The ''Shinkai 6500'' (しんかい) is a crewed research submersible that can dive up to a depth of . It was completed in 1990 and had the greatest depth range of any crewed research vehicle in the world until June 19, 2012, when its record was ...
, Kaikō and other groups have discovered many sites. Methane seep communities in
Japan Japan ( ja, 日本, or , and formally , ''Nihonkoku'') is an island country in East Asia. It is situated in the northwest Pacific Ocean, and is bordered on the west by the Sea of Japan, while extending from the Sea of Okhotsk in the n ...
are distributed along plate convergence areas because of the accompanying
tectonic Tectonics (; ) are the processes that control the structure and properties of the Earth's crust and its evolution through time. These include the processes of mountain building, the growth and behavior of the strong, old cores of continents ...
activity. Many seeps have been found in the
Japan Trench The Japan Trench is an oceanic trench part of the Pacific Ring of Fire off northeast Japan. It extends from the Kuril Islands to the northern end of the Izu Islands, and is at its deepest. It links the Kuril–Kamchatka Trench to the north and ...
,
Nankai Trough The is a submarine trough located south of the Nankaidō region of Japan's island of Honshu, extending approximately offshore. The underlying fault, the ''Nankai megathrust,'' is the source of the devastating Nankai megathrust earthquakes, wh ...
, Ryukyu Trench,
Sagami Bay lies south of Kanagawa Prefecture in Honshu, central Japan, contained within the scope of the Miura Peninsula, in Kanagawa, to the east, the Izu Peninsula, in Shizuoka Prefecture, to the west, and the Shōnan coastline to the north, while th ...
and
Suruga Bay Suruga Bay (駿河湾, ''Suruga-wan'') is a bay on the Pacific coast of Honshū in Shizuoka Prefecture, Japan. It is situated north of a straight line from Omaezaki Point to Irōzaki Point at the tip of the Izu Peninsula and surrounded by Hon ...
, and the
Sea of Japan The Sea of Japan is the marginal sea between the Japanese archipelago, Sakhalin, the Korean Peninsula, and the mainland of the Russian Far East. The Japanese archipelago separates the sea from the Pacific Ocean. Like the Mediterranean Sea, i ...
. Members of cold seep communities are similar to other regions in terms of family or genus, such as Polycheata; Lamellibrachia, Bivalavia; Solemyidae, Bathymodiolus in Mytilidae, Thyasiridae, Calyptogena in Vesicomyidae and so forth. Many of species in cold seeps of Japan are
endemic Endemism is the state of a species being found in a single defined geographic location, such as an island, state, nation, country or other defined zone; organisms that are indigenous to a place are not endemic to it if they are also found else ...
. In Kagoshima Bay, there are methane gas seepages called "tagiri" (boiling). ''
Lamellibrachia satsuma ''Lamellibrachia satsuma'' (also known as Satsuma tubeworm or Satsumahaorimushi or ) was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only the shallowest depth record for a vestimentiferan. Its symbiotic s ...
'' live around there. The depth of this site is only 80 m, which is the shallowest point Siboglinidae living. ''L. satsuma'' may be kept in an aquarium for a long period in 1 atm. Two aquariums in Japan are keeping and displaying ''L. satsuma''. An observation method to introduce it into a transparent vinyl tube is being developed. DSV Shinkai 6500 discovered vesicomyid clam communities in the Southern Mariana Forearc. They depend on methane which originates in
serpentinite Serpentinite is a rock composed predominantly of one or more serpentine group minerals, the name originating from the similarity of the texture of the rock to that of the skin of a snake. Serpentinite has been called ''serpentine'' or ''s ...
. Other chemosynthetic communities would depend on hydrocarbon origins organic substance in crust, but these communities depend on methane originating from inorganic substances from the mantle. In 2011, was performed around the
Japan Trench The Japan Trench is an oceanic trench part of the Pacific Ring of Fire off northeast Japan. It extends from the Kuril Islands to the northern end of the Izu Islands, and is at its deepest. It links the Kuril–Kamchatka Trench to the north and ...
which is epicenter of Tōhoku earthquake. There are cracks, methane seepages and bacterial mats which were probably created by the earthquake.


New Zealand

Off the mainland coast of
New Zealand New Zealand ( mi, Aotearoa ) is an island country in the southwestern Pacific Ocean. It consists of two main landmasses—the North Island () and the South Island ()—and over 700 smaller islands. It is the sixth-largest island coun ...
, shelf-edge instability is enhanced in some locations by cold seeps of methane-rich fluids that likewise support chemosynthetic faunas and carbonate concretions. Dominant animals are tube worms of the family
Siboglinidae Siboglinidae is a family of polychaete annelid worms whose members made up the former phyla Pogonophora and Vestimentifera (the giant tube worms). The family is composed of about 100 species of vermiform creatures which live in thin tubes buried ...
and bivalves of families Vesicomyidae and
Mytilidae Mytilidae are a family of small to large marine and brackish-water bivalve molluscs in the order Mytilida. One of the genera, '' Limnoperna'', even inhabits freshwater environments. The order has only this one family which contains some 52 gener ...
(''
Bathymodiolus ''Bathymodiolus'' is a genus of deep-sea mussels, marine bivalve molluscs in the family Mytilidae. Many of them contain intracelluar chemoautotrophic bacterial symbionts. Species Modern (non-fossil) species within the genus ''Bathymodiolus'' i ...
''). Many of its species appear to be endemic. Deep
bottom trawling Bottom trawling is trawling (towing a trawl, which is a fishing net) along the seafloor. It is also referred to as "dragging". The scientific community divides bottom trawling into benthic trawling and demersal trawling. Benthic trawling is towing ...
has severely damaged cold seep communities and those ecosystems are threatened. Depths down to 2,000 m including cold seeps belongs among as-yet-unmapped topographic and chemical complexity of habitats. The scale of new-species discovery in these poorly studied or unexplored ecosystems is likely to be high.


In the East Pacific

In the deep sea the COMARGE project has studied the biodiversity patterns along and across the
Chile Chile, officially the Republic of Chile, is a country in the western part of South America. It is the southernmost country in the world, and the closest to Antarctica, occupying a long and narrow strip of land between the Andes to the eas ...
an margin through a complexity of ecosystems such as methane seeps and
oxygen minimum zone The oxygen minimum zone (OMZ), sometimes referred to as the shadow zone, is the zone in which oxygen saturation in seawater in the ocean is at its lowest. This zone occurs at depths of about , depending on local circumstances. OMZs are found worl ...
s reporting that such habitat
heterogeneity Homogeneity and heterogeneity are concepts often used in the sciences and statistics relating to the uniformity of a substance or organism. A material or image that is homogeneous is uniform in composition or character (i.e. color, shape, siz ...
may influence the biodiversity patterns of the local fauna. Seep fauna include bivalves of families
Lucinidae Lucinidae, common name hatchet shells, is a family of saltwater clams, marine bivalve molluscs. These bivalves are remarkable for their endosymbiosis with sulphide-oxidizing bacteria. Characteristics The members of this family have a worldwi ...
,
Thyasiridae Thyasiridae is a family of bivalve molluscs, including the cleft clams, in the order Lucinida. Genera and species * '' Adontorhina'' S. S. Berry, 1947 ** '' Adontorhina cyclia'' S. S. Berry, 1947 ** '' Adontorhina keegani'' Barry & McCormack, ...
,
Solemyidae Solemyidae is a family of saltwater clams, marine protobranch bivalve mollusks in the order Solemyida. Biology Solemyids are remarkable in that their digestive tract is either extremely small or non-existent, and their feeding appendages are too ...
('' Acharax'' sp.), and Vesicomyidae ('' Calyptogena gallardoi'') and polychaetes '' Lamellibrachia'' sp. and two other polychaete species. Furthermore, in these soft reduced
sediment Sediment is a naturally occurring material that is broken down by processes of weathering and erosion, and is subsequently transported by the action of wind, water, or ice or by the force of gravity acting on the particles. For example, sand ...
s below the oxygen minimum zone off the Chilean margin, a diverse microbial community composed by a variety of large
prokaryote A prokaryote () is a single-celled organism that lacks a nucleus and other membrane-bound organelles. The word ''prokaryote'' comes from the Greek πρό (, 'before') and κάρυον (, 'nut' or 'kernel').Campbell, N. "Biology:Concepts & Con ...
s (mainly large multi-cellular filamentous "mega bacteria" of the genera '' Thioploca'' and ''
Beggiatoa ''Beggiatoa'' is a genus of '' Gammaproteobacteria'' belonging the order ''Thiotrichales,'' in the '' Pseudomonadota'' phylum. This genus was one of the first bacteria discovered by Ukrainian botanist Sergei Winogradsky. During his research in ...
'', and of "macrobacteria" including a diversity of phenotypes),
protist A protist () is any eukaryotic organism (that is, an organism whose cells contain a cell nucleus) that is not an animal, plant, or fungus. While it is likely that protists share a common ancestor (the last eukaryotic common ancestor), the e ...
s (ciliates, flagellates, and foraminifers), as well as small metazoans (mostly nematodes and polychaetes) has been found. Gallardo et al. (2007) argue that the likely chemolithotrophic metabolism of most of these mega- and macrobacteria offer an alternative explanation to
fossil A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved ...
findings, in particular to those from obvious non-littoral origins, suggesting that traditional hypotheses on the cyanobacterial origin of some fossils may have to be revised. Cold seeps ( pockmark) are also known from depths of 130 m in the
Hecate Strait , image = HecateStrait(PittIsland).JPG , image_size = 260px , alt = , caption = Hecate Strait and Pitt Island , image_bathymetry = Loc-QCS-Hecate-Dixon.png , alt_bathymetry = , caption ...
,
British Columbia British Columbia (commonly abbreviated as BC) is the westernmost province of Canada, situated between the Pacific Ocean and the Rocky Mountains. It has a diverse geography, with rugged landscapes that include rocky coastlines, sandy beaches, for ...
, Canada. Unobvious fauna (also unobvious for cold seeps) has been found there with these dominating species: sea snail ''Fusitriton oregonensis'', anemone ''Metridium giganteum'', encrusting sponges and bivalve ''Solemya reidi''. Cold seeps with chemosynthetic communities along the USA Pacific coast occur in Monterey Canyon, just off Monterey Bay, California on a
mud volcano A mud volcano or mud dome is a landform created by the eruption of mud or slurries, water and gases. Several geological processes may cause the formation of mud volcanoes. Mud volcanoes are not true igneous volcanoes as they do not produce ...
.Lorenson T. D., Kvenvolden K. A., Hostettler F. D., Rosenbauer R. J., Martin J. B. & Orange D. L. (1999)
"Hydrocarbons Associated with Fluid Venting Process in Monterey Bay, California"
USGS Pacific Coastal & Marine Science Center.
There have been found, for example ''
Calyptogena Vesicomyidae is a family of saltwater clams, marine bivalve molluscs in the superfamily Glossoidea. MolluscaBase eds. (2022). MolluscaBase. Vesicomyidae Dall & Simpson, 1901. Accessed through: World Register of Marine Species at: https://www.m ...
'' clams ''Calyptogena kilmeri'' and ''Calyptogena pacifica'' and foraminiferan ''Spiroplectammina biformis''.
map of cold seeps in the Monterey Bay
Additionally, seeps have been discovered offshore southern California in the inner California Borderlands along several fault systems including the San Clemente fault, San Pedro fault, and San Diego Trough fault. Fluid flow at the seeps along the San Pedro and San Diego Trough faults appears controlled by localized restraining bends in the faults.


In the Antarctic

The first cold seep was reported from
Southern Ocean The Southern Ocean, also known as the Antarctic Ocean, comprises the southernmost waters of the World Ocean, generally taken to be south of 60° S latitude and encircling Antarctica. With a size of , it is regarded as the second-smal ...
in 2005. The relatively few investigations to the Antarctic deep sea have shown the presence of deep-water habitats, including
hydrothermal vent A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspo ...
s, cold seeps, and
mud volcano A mud volcano or mud dome is a landform created by the eruption of mud or slurries, water and gases. Several geological processes may cause the formation of mud volcanoes. Mud volcanoes are not true igneous volcanoes as they do not produce ...
es. Other than the Antarctic Benthic Deep-Sea Biodiversity Project (ANDEEP) cruises, little work has been done in the deep sea. There are more species waiting to be described.


Detection

With continuing experience, particularly on the upper continental slope in the Gulf of Mexico, the successful prediction of the presence of tubeworm communities continues to improve, however chemosynthetic communities cannot be reliably detected directly using Geophysical survey, geophysical techniques. Hydrocarbon seeps that allow chemosynthetic communities to exist do modify the geological characteristics in ways that can be remotely detected, but the time scales of co-occurring active seepage and the presence of living communities is always uncertain. These known sediment modifications include (1) precipitation of
authigenic Authigenesis is the process whereby a mineral or sedimentary rock deposit is generated where it is found or observed. Such deposits are described as authigenic. Authigenic sedimentary minerals form during sedimentation by precipitation or rec ...
carbonate in the form of micronodules, Nodule (geology), nodules, or rock masses; (2) formation of
gas hydrate Clathrate hydrates, or gas hydrates, clathrates, hydrates, etc., are crystalline water-based solids physically resembling ice, in which small non-polar molecules (typically gases) or polar molecules with large hydrophobic moieties are trapped ...
s; (3) modification of
sediment Sediment is a naturally occurring material that is broken down by processes of weathering and erosion, and is subsequently transported by the action of wind, water, or ice or by the force of gravity acting on the particles. For example, sand ...
composition through concentration of hard chemosynthetic organism remains (such as shell fragments and layers); (4) formation of interstitial gas bubbles or hydrocarbons; and (5) formation of depressions or pockmarks by gas expulsion. These features give rise to acoustic effects such as wipeout zones (no echoes), hard bottoms (strongly reflective echoes), bright spots (reflection enhanced layers), or reverberant layers (Behrens, 1988; Roberts and Neurauter, 1990). "Potential" locations for most types of communities can be determined by careful interpretation of these various geophysical modifications, but to date, the process remains imperfect and confirmation of living communities requires direct visual techniques.


Fossilized records

Cold seep deposits are found throughout the Phanerozoic geologic record, especially in the Late
Mesozoic The Mesozoic Era ( ), also called the Age of Reptiles, the Age of Conifers, and colloquially as the Age of the Dinosaurs is the second-to-last era of Earth's geological history, lasting from about , comprising the Triassic, Jurassic and Cretace ...
and Cenozoic. Notable examples can be found in the Cretaceous of Hokkaido, the Palaeogene of Honshu, and the Neogene of Northern Italy. These
fossil A fossil (from Classical Latin , ) is any preserved remains, impression, or trace of any once-living thing from a past geological age. Examples include bones, shells, exoskeletons, stone imprints of animals or microbes, objects preserved ...
cold seeps are characterized by mound-like topography (where preserved), coarsely crystalline carbonates, and abundant mollusks and brachiopods.


Environmental Impacts

Major threats that cold seep ecosystems and their communities face today are seafloor litter, chemical contaminants and climate change. Seafloor litter alters the habitat, by providing hard substrate where none was available before or by overlying the sediment, inhibiting gas exchange, and interfering with organisms on the bottom of the sea. Studies of marine litter in the Mediterranean include surveys of seabed debris on the continental shelf, slope, and bathyal plain. In most studies, plastic items accounted for much of the debris, sometimes as much as 90% or more of the total, owing to their ubiquitous use and poor degradability. Weapons and bombs have also been discarded at sea and their dumping in open waters contributes to seafloor contamination. Another major threat to the benthic fauna is the presence of lost fishing gear, such as nets and longlines, which contribute to Ghost net, ghost fishing and can damage fragile ecosystems such as cold-water corals. Chemical contaminants such as persistent organic pollutants, toxic metals (e.g., Hg, Cd, Pb, Ni), radioactive compounds, pesticides, herbicides, and pharmaceuticals are also accumulating in deep-sea sediments. Topography (e.g. presence of canyons) and hydrography (e.g., cascading events) play a major role in the transportation and accumulation of these chemicals from the coast and shelf to the deep basins, affecting the local fauna. Recent studies have detected the presence of significant levels of dioxins in the commercial shrimp ''Aristeus antennatus'' and significant levels of persistent organic pollutants in mesopelagic and bathypelagic cephalopods Climate driven processes and climate change will affect the frequency and intensity of cascading, with unknown effects on the benthic fauna. Another potential effect of climate change is related to energy transport from surface waters to the seafloor. Primary production will change in the surface layers according to sun exposure, water temperature, major stratification of water masses, for example and this will affect the food chain down to the deep seafloor, which will be subject to differences in quantity, quality, and timing of organic matter input. As commercial fisheries move into deeper waters, all of these effects will affect the communities and populations of organisms in cold seeps and the deep sea in general.


See also

* Chemotroph * Gas hydrate pingo


References

This article incorporates a public domain work of the United States Government from referencesHsing P.-Y. (19 October 2010)
"Gas-powered Circle of Life – Succession in a Deep-sea Ecosystem"
NOAA Ocean Explorer , Lophelia II 2010: Oil Seeps and Deep Reefs , 18 October Log. Retrieved 25 January 2011.
and CC-BY-2.5 from references and CC-BY-3.0 text from the reference


Further reading

* * * * * * * *


External links


Paul Yancy's vents and seeps page
{{Biomes Aquatic ecology Bodies of water Coastal and oceanic landforms Marine geology Oceanographical terminology