Signaling Gateway is a web portal dedicated to
signaling pathways powered by the
San Diego Supercomputer Center at the
University of California, San Diego
The University of California, San Diego (UC San Diego or colloquially, UCSD) is a public university, public Land-grant university, land-grant research university in San Diego, California. Established in 1960 near the pre-existing Scripps Insti ...
. It was initiated by a collaboration between the Alliance for Cellular Signaling and
Nature
Nature, in the broadest sense, is the physics, physical world or universe. "Nature" can refer to the phenomenon, phenomena of the physical world, and also to life in general. The study of nature is a large, if not the only, part of science. ...
. A primary feature is the Molecule Pages database.
Molecule Pages Database (online database journal)
Signaling Gateway Molecule Pages is a database containing "essential information on more than 8000 mammalian proteins (Mouse and Human) involved in cellular signaling."
The content of molecule pages is authored by invited experts and is peer-reviewed. The published pages are citable by digital object identifiers (DOIs). All data in the Molecule Pages are freely available to the public.
Data can be exported to
PDF
Portable Document Format (PDF), standardized as ISO 32000, is a file format developed by Adobe in 1992 to present documents, including text formatting and images, in a manner independent of application software, hardware, and operating systems. ...
,
XML
Extensible Markup Language (XML) is a markup language and file format for storing, transmitting, and reconstructing arbitrary data. It defines a set of rules for encoding documents in a format that is both human-readable and machine-readable. T ...
,
BioPAX BioPAX (Biological Pathway Exchange) is a RDF/OWL-based
standard language to represent biological pathways
at the molecular and cellular level. Its major use is to facilitate the exchange of pathway data.
Pathway data captures our understanding of ...
/
SBPAX BioPAX (Biological Pathway Exchange) is a RDF/OWL-based
standard language to represent biological pathways
at the molecular and cellular level. Its major use is to facilitate the exchange of pathway data.
Pathway data captures our understanding of ...
and
SBML
The Systems Biology Markup Language (SBML) is a representation format, based on XML, for communicating and storing computational models of biological processes. It is a free and open standard with widespread software support and a community of use ...
.
MIRIAM Registry Details.
SGMP as part of MIRIAM Registry
/ref>
Some Published Molecule Pages
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References
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External links
Signaling Gateway Molecule Pages
Cell biology
Cell signaling
Neurochemistry
Signal transduction
Biological databases