In
organic chemistry
Organic chemistry is a subdiscipline within chemistry involving the scientific study of the structure, properties, and reactions of organic compounds and organic materials, i.e., matter in its various forms that contain carbon atoms.Clayden, J.; ...
, a pericyclic reaction is the type of
organic reaction
Organic reactions are chemical reactions involving organic compounds. The basic organic chemistry reaction types are addition reactions, elimination reactions, substitution reactions, pericyclic reactions, rearrangement reactions, Mechanistic Organ ...
wherein the
transition state
In chemistry, the transition state of a chemical reaction is a particular configuration along the reaction coordinate. It is defined as the state corresponding to the highest potential energy along this reaction coordinate. It is often marked wi ...
of the molecule has a cyclic geometry, the reaction progresses in a
concerted fashion, and the
bond orbitals involved in the reaction overlap in a continuous cycle at the transition state. Pericyclic reactions stand in contrast to ''linear reactions'', encompassing most organic transformations and proceeding through an acyclic transition state, on the one hand and ''
coarctate reactions'', which proceed through a doubly cyclic, concerted transition state on the other hand. Pericyclic reactions are usually
rearrangement or
addition
Addition (usually signified by the Plus and minus signs#Plus sign, plus symbol ) is one of the four basic Operation (mathematics), operations of arithmetic, the other three being subtraction, multiplication and Division (mathematics), division. ...
reactions. The major classes of pericyclic reactions are given in the table below (the three most important classes are shown in bold). Ene reactions and cheletropic reactions are often classed as group transfer reactions and cycloadditions/cycloeliminations, respectively, while dyotropic reactions and group transfer reactions (if ene reactions are excluded) are rarely encountered.
In general, these are considered to be
equilibrium processes, although it is possible to push the reaction in one direction by designing a reaction by which the product is at a significantly lower energy level; this is due to a unimolecular interpretation of
Le Chatelier's principle
Le Chatelier's principle (pronounced or ), also called Chatelier's principle (or the Equilibrium Law), is a principle of chemistry used to predict the effect of a change in conditions on chemical equilibria. The principle is named after French c ...
. There is thus a set of "retro" pericyclic reactions.
Mechanism of pericyclic reaction
By definition, pericyclic reactions proceed through a concerted mechanism involving a single, cyclic transition state. Because of this, prior to a systematic understanding of pericyclic processes through the ''
principle of orbital symmetry conservation'', they were facetiously referred to as 'no-mechanism reactions'. However, reactions for which pericyclic mechanisms can be drawn often have related stepwise mechanisms proceeding through radical or dipolar intermediates that are also viable. Some classes of pericyclic reactions, such as the
+2 ketene cycloaddition reactions, can be 'controversial' because their mechanism is sometimes not definitively known to be concerted (or may depend on the reactive system). Moreover, pericyclic reactions also often have metal-catalyzed analogs, although usually these are also not technically pericyclic, since they proceed via metal-stabilized intermediates, and therefore are not concerted.
Despite these caveats, the theoretical understanding of pericyclic reactions is probably among the most sophisticated and well-developed in all of organic chemistry. The understanding of how orbitals interact in the course of a pericyclic process has led to the
Woodward–Hoffmann rules The Woodward–Hoffmann rules (or the pericyclic selection rules), devised by Robert Burns Woodward and Roald Hoffmann, are a set of rules used to rationalize or predict certain aspects of the stereochemistry and activation energy of pericyclic reac ...
, a simple set of criteria to predict whether a pericyclic mechanism for a reaction is likely or favorable. For instance, these rules predict that the
+2cycloaddition of butadiene and ethylene under thermal conditions is likely a pericyclic process, while the
+2cycloaddition of two ethylene molecules is not. These are consistent with experimental data, supporting an ordered, concerted transition state for the former and a multistep radical process for the latter. Several equivalent approaches, outlined below, lead to the same predictions.
The aromatic transition state theory assumes that the minimum energy
transition state
In chemistry, the transition state of a chemical reaction is a particular configuration along the reaction coordinate. It is defined as the state corresponding to the highest potential energy along this reaction coordinate. It is often marked wi ...
for a pericyclic process is
aromatic
In chemistry, aromaticity is a chemical property of cyclic ( ring-shaped), ''typically'' planar (flat) molecular structures with pi bonds in resonance (those containing delocalized electrons) that gives increased stability compared to satur ...
, with the choice of reaction topology determined by the number of electrons involved. For reactions involving (4''n'' + 2)-electron systems (2, 6, 10, ... electrons; odd number of electron pairs),
Hückel topology transition states are proposed, in which the reactive portion of the reacting molecule or molecules have orbitals interacting in a continuous cycle with an even number of nodes. In 4''n''-electron systems (4, 8, 12, ... electrons; even number of electron pairs)
Möbius topology transition states are proposed, in which the reacting molecules have orbitals interacting in a ''twisted'' continuous cycle with an odd number of nodes. The corresponding (4''n'' + 2)-electron Möbius and 4''n''-electron Hückel transition states are antiaromatic and are thus strongly disfavored. Aromatic transition state theory results in a particularly simply statement of the generalized Woodward–Hoffmann rules: A pericyclic reaction involving an odd number of electron pairs will proceed through a Hückel transition state (even number of antarafacial components in Woodward–Hoffmann terminology), while a pericyclic reaction involving an even number of electron pairs will proceed through a Möbius transition state (odd number of antarafacial components).
Equivalently, pericyclic reactions have been analyzed with correlation diagrams, which track the evolution of the molecular orbitals (known as 'correlating' the molecular orbitals) of the reacting molecules as they progress from reactants to products via a transition state, based on their symmetry properties. Reactions are favorable ('allowed') if the ground state of the reactants correlate with the ground state of the products, while they are unfavorable ('forbidden') if the ground state of the reactants correlate with an excited state of the products. This idea is known as the ''conservation of orbital symmetry''. Consideration of the interactions of the highest occupied and lowest unoccupied molecular orbitals (frontier orbital analysis) is another approach to analyzing the transition state of a pericyclic reaction.
Arrow-pushing for pericyclic reactions
The arrow-pushing convention for pericyclic reactions has a somewhat different meaning compared to polar (and radical) reactions. For pericyclic reactions, there is often no obvious movement of electrons from an electron rich source to an electron poor sink. Rather, electrons are redistributed around a cyclic transition state. Thus, electrons can be pushed in either of two directions for a pericyclic reaction. For some pericyclic reactions, however, there is a definite polarization of charge at the transition state due to asynchronicity (bond formation and breaking do not occur to a uniform extent at the transition state). Thus, one direction may be preferred over another, although arguably, both depictions are still formally correct. In the case of the Diels-Alder reaction shown below, resonance arguments make clear the direction of polarization. In more complex situations, however, detailed computations may be needed to determine the direction and extent of polarization.
Pseudopericyclic processes
Closely related to pericyclic processes are reactions that are pseudopericyclic. Although a ''pseudopericyclic reaction'' proceeds through a cyclic transition state, two of the orbitals involved are constrained to be orthogonal and cannot interact. Perhaps the most famous example is the
hydroboration of an olefin. Although this appears to be a 4-electron Hückel topology forbidden group transfer process, the empty p orbital and sp
2 hybridized B–H bond are orthogonal and do not interact. Hence, the Woodward-Hoffmann rules do not apply. (The fact that hydroboration is believed to proceed through initial π complexation may also be relevant.)
In biochemistry
Pericyclic reactions also occur in several biological processes:
*
Claisen rearrangement
The Claisen rearrangement is a powerful carbon–carbon bond-forming chemical reaction discovered by Rainer Ludwig Claisen. The heating of an allyl vinyl ether will initiate a ,3sigmatropic rearrangement to give a γ,δ-unsaturated carbonyl, d ...
of
chorismate
Chorismic acid, more commonly known as its anionic form chorismate, is an important biochemical intermediate in plants and microorganisms. It is a precursor for:
* The aromatic amino acids phenylalanine, tryptophan, and tyrosine
* Indole, indole d ...
to
prephenate
Prephenic acid, commonly also known by its anionic form prephenate, is an intermediate in the biosynthesis of the aromatic amino acids phenylalanine and tyrosine, as well as of a large number of secondary metabolites of the shikimate pathway.
It ...
in almost all
prototroph
Auxotrophy ( grc, αὐξάνω "to increase"; ''τροφή'' "nourishment") is the inability of an organism to synthesize a particular organic compound required for its growth (as defined by IUPAC). An auxotroph is an organism that displays this ...
ic organisms
*
,5 sigmatropic shift in the transformation of
precorrin-8x to
hydrogenobyrinic acid
*non-enzymatic, photochemical
electrocyclic In organic chemistry, an electrocyclic reaction is a type of pericyclic rearrangement where the net result is one pi bond being converted into one sigma bond or vice versa. These reactions are usually categorized by the following criteria:
* React ...
ring opening and a (1,7)
sigmatropic
A sigmatropic reaction in organic chemistry is a pericyclic reaction wherein the net result is one σ-bond is changed to another σ-bond in an uncatalyzed intramolecular reaction. The name ''sigmatropic'' is the result of a compounding of the long ...
hydride shift in
vitamin D
Vitamin D is a group of fat-soluble secosteroids responsible for increasing intestinal absorption of calcium, magnesium, and phosphate, and many other biological effects. In humans, the most important compounds in this group are vitamin D3 (c ...
synthesis
*
Isochorismate pyruvate lyase catalyzed conversion of
isochorismate into
salicylate
Salicylic acid is an organic compound with the formula HOC6H4CO2H. A colorless, bitter-tasting solid, it is a precursor to and a metabolite of aspirin (acetylsalicylic acid). It is a plant hormone, and has been listed by the EPA Toxic Substance ...
and
pyruvate
Pyruvic acid (CH3COCOOH) is the simplest of the alpha-keto acids, with a carboxylic acid and a ketone functional group. Pyruvate, the conjugate base, CH3COCOO−, is an intermediate in several metabolic pathways throughout the cell.
Pyruvic aci ...
[''Isochorismate Pyruvate Lyase: A Pericyclic Reaction Mechanism?'' Michael S. DeClue, Kim K. Baldridge, Dominik E. Künzler, Peter Kast, and Donald Hilvert ]J. Am. Chem. Soc.
The ''Journal of the American Chemical Society'' is a weekly peer-reviewed scientific journal that was established in 1879 by the American Chemical Society. The journal has absorbed two other publications in its history, the ''Journal of Analytic ...
; 2005; 127(43) pp 15002 - 15003; (Communication)
:
See also
*
Coarctate reaction
In the classification of organic reactions by transition state topology, a coarctate reaction (from L. ''coarctare'' "to constrict") is a third, comparatively uncommon topology, after linear topology and pericyclic topology (itself subdivided int ...
*
Woodward–Hoffmann rules The Woodward–Hoffmann rules (or the pericyclic selection rules), devised by Robert Burns Woodward and Roald Hoffmann, are a set of rules used to rationalize or predict certain aspects of the stereochemistry and activation energy of pericyclic reac ...
References
{{Authority control
Rearrangement reactions
Reaction mechanisms