A partial charge is a non-
integer
An integer is the number zero (), a positive natural number (, , , etc.) or a negative integer with a minus sign (−1, −2, −3, etc.). The negative numbers are the additive inverses of the corresponding positive numbers. In the language ...
charge value when measured in
elementary charge
The elementary charge, usually denoted by is the electric charge carried by a single proton or, equivalently, the magnitude of the negative electric charge carried by a single electron, which has charge −1 . This elementary charge is a fundame ...
units. Partial charge is more commonly called net atomic charge. It is represented by the Greek lowercase letter
𝛿, namely 𝛿− or 𝛿+.
Partial charges are created due to the asymmetric distribution of electrons in chemical bonds. For example, in a
polar covalent bond
In chemistry, polarity is a separation of electric charge leading to a molecule or its chemical groups having an electric dipole moment, with a negatively charged end and a positively charged end.
Polar molecules must contain one or more polar ...
like HCl, the shared electron oscillates between the bonded atoms. The resulting partial charges are a property only of zones within the distribution, and not the assemblage as a whole. For example, chemists often choose to look at a small space surrounding the
nucleus
Nucleus ( : nuclei) is a Latin word for the seed inside a fruit. It most often refers to:
*Atomic nucleus, the very dense central region of an atom
*Cell nucleus, a central organelle of a eukaryotic cell, containing most of the cell's DNA
Nucle ...
of an
atom
Every atom is composed of a nucleus and one or more electrons bound to the nucleus. The nucleus is made of one or more protons and a number of neutrons. Only the most common variety of hydrogen has no neutrons.
Every solid, liquid, gas, and ...
: When an electrically neutral atom
bonds chemically to another neutral atom that is more
electronegative
Electronegativity, symbolized as , is the tendency for an atom of a given chemical element to attract shared electrons (or electron density) when forming a chemical bond. An atom's electronegativity is affected by both its atomic number and the d ...
, its electrons are partially drawn away. This leaves the region about that atom's nucleus with a partial positive charge, and it creates a partial negative charge on the atom to which it is bonded.
In such a situation, the distributed charges taken as a group always carries a
whole number of elementary charge units. Yet one can point to zones within the assemblage where less than a full charge resides, such as the area around an atom's nucleus. This is possible in part because particles are not like mathematical points—which must be either inside a zone or outside it—but are smeared out by the
uncertainty principle
In quantum mechanics, the uncertainty principle (also known as Heisenberg's uncertainty principle) is any of a variety of mathematical inequalities asserting a fundamental limit to the accuracy with which the values for certain pairs of physic ...
of
quantum mechanics
Quantum mechanics is a fundamental theory in physics that provides a description of the physical properties of nature at the scale of atoms and subatomic particles. It is the foundation of all quantum physics including quantum chemistry, ...
. Because of this smearing effect, if one defines a sufficiently small zone, a fundamental particle may be both partly inside and partly outside it.
Uses
Partial atomic charges are used in
molecular mechanics
Molecular mechanics uses classical mechanics to model molecular systems. The Born–Oppenheimer approximation is assumed valid and the potential energy of all systems is calculated as a function of the nuclear coordinates using force fields. Mo ...
force fields
Force field may refer to:
Science
* Force field (chemistry), a set of parameter and equations for use in molecular mechanics simulations
* Force field (physics), a vector field indicating the forces exerted by one object on another
* Force field ( ...
to compute the electrostatic interaction energy using
Coulomb's law
Coulomb's inverse-square law, or simply Coulomb's law, is an experimental law of physics that quantifies the amount of force between two stationary, electrically charged particles. The electric force between charged bodies at rest is conventiona ...
, even though this leads to substantial failures for anisotropic charge distributions. Partial charges are also often used for a qualitative understanding of the structure and reactivity of molecules.
Occasionally, δδ+ is used to indicate a partial charge that is less positively charged than δ+ (likewise for δδ-) in cases where it's relevant to do so. This can be extended to δδδ+ to indicate even weaker partial charges as well. Generally, a single δ+ (or δ-) is sufficient for most discussions of partial charge in organic chemistry.
Determining partial atomic charges
Partial atomic charges can be used to quantify the degree of ionic versus covalent bonding of any compound across the periodic table. The necessity for such quantities arises, for example, in molecular simulations to compute bulk and surface properties in agreement with experiment. Evidence for chemically different compounds shows that available experimental data and chemical understanding lead to justified atomic charges. Atomic charges for a given compound can be derived in multiple ways, such as:
# extracted from electron densities measured using high resolution x-ray, gamma ray, or electron beam diffraction experiments
# measured dipole moments
# the Extended Born thermodynamic cycle, including an analysis of covalent and ionic bonding contributions
# spectroscopically measured properties, such as core-electron binding energy shifts
# the relationship of atomic charges to melting points, solubility, and cleavage energies for a set of similar compounds with similar degree of covalent bonding
# the relationship of atomic charges to chemical reactivity and reaction mechanisms for similar compounds reported in the literature.
The discussion of individual compounds in prior work has shown convergence in atomic charges, i.e., a high level of consistency between the assigned degree of polarity and the physical-chemical properties mentioned above. The resulting uncertainty in atomic charges is ±0.1e to ±0.2e for highly charged compounds, and often <0.1e for compounds with atomic charges below ±1.0e. Often, the application of one or two of the above concepts already leads to very good values, especially taking into account a growing library of experimental benchmark compounds and compounds with tested force fields.
The published research literature on partial atomic charges varies in quality from extremely poor to extremely well-done. Although a large number of different methods for assigning partial atomic charges from quantum chemistry calculations have been proposed over many decades, the vast majority of proposed methods do not work well across a wide variety of material types.
Only as recently as 2016 was a method for theoretically computing partial atomic charges developed that performs consistently well across an extremely wide variety of material types.
All of the earlier methods had fundamental deficiencies that prevented them from assigning accurate partial atomic charges in many materials.
Mulliken and Löwdin partial charges are physically unreasonable, because they do not have a mathematical limit as the basis set is improved towards completeness.
Hirshfeld partial charges are usually too low in magnitude. Some methods for assigning partial atomic charges do not converge to a unique solution.
In some materials,
atoms in molecules analysis yields non-nuclear attractors describing electron density partitions that cannot be assigned to any atom in the material; in such cases,
atoms in molecules analysis cannot assign partial atomic charges.
According to Cramer (2002), partial charge methods can be divided into four classes:
*''Class I charges'' are those that are not determined from quantum mechanics, but from some intuitive or arbitrary approach. These approaches can be based on experimental data such as dipoles and electronegativities.
*''Class II charges'' are derived from partitioning the molecular wave function using some arbitrary, orbital based scheme.
*''Class III charges'' are based on a partitioning of a physical observable derived from the wave function, such as electron density.
*''Class IV charges'' are derived from a semiempirical mapping of a precursor charge of type II or III to reproduce experimentally determined observables such as dipole moments.
The following is a detailed list of methods, partly based on Meister and Schwarz (1994).
* Population analysis of
wavefunction
A wave function in quantum physics is a mathematical description of the quantum state of an isolated quantum system. The wave function is a complex-valued probability amplitude, and the probabilities for the possible results of measurements mad ...
s
**
Mulliken population analysis Mulliken charges arise from the Mulliken population analysis and provide a means of estimating partial atomic charges from calculations carried out by the methods of computational chemistry
Computational chemistry is a branch of chemistry that us ...
** Löwdin population analysis
** Coulson's charges
** Natural charges
** CM1, CM2, CM3, CM4, and CM5 charge models
* Partitioning of
electron density
In quantum chemistry, electron density or electronic density is the measure of the probability of an electron being present at an infinitesimal element of space surrounding any given point. It is a scalar quantity depending upon three spatial va ...
distributions
** Bader charges (obtained from an
atoms in molecules analysis)
** Density fitted atomic charges
** Hirshfeld charges
** Maslen's corrected Bader charges
** Politzer's charges
**
Voronoi Deformation Density charges
** Density Derived Electrostatic and Chemical (DDEC) charges, which simultaneously reproduce the chemical states of atoms in a material and the electrostatic potential surrounding the material's electron density distribution
* Charges derived from dipole-dependent properties
**
Dipole
In physics, a dipole () is an electromagnetic phenomenon which occurs in two ways:
*An electric dipole deals with the separation of the positive and negative electric charges found in any electromagnetic system. A simple example of this system i ...
charges
** Dipole derivative charges, also called atomic polar tensor (APT) derived charges, or Born, Callen, or Szigeti effective charges
* Charges derived from electrostatic potential
** Chelp
**
ChelpG (Breneman model)
** Merz-Singh-Kollman (also known as Merz-Kollman, or MK)
** RESP (Restrained Electrostatic Potential)
* Charges derived from
spectroscopic
Spectroscopy is the field of study that measures and interprets the electromagnetic spectra that result from the interaction between electromagnetic radiation and matter as a function of the wavelength or frequency of the radiation. Matter wa ...
data
** Charges from infrared intensities
** Charges from
X-ray photoelectron spectroscopy
X-ray photoelectron spectroscopy (XPS) is a surface-sensitive quantitative spectroscopic technique based on the photoelectric effect that can identify the elements that exist within a material (elemental composition) or are covering its surface, ...
(ESCA)
** Charges from
X-ray emission spectroscopy X-ray emission spectroscopy (XES) is a form of X-ray spectroscopy in which the X-ray line spectra are measured with a spectral resolution sufficient to analyze the impact of the chemical environment on the X-ray line energy and on branching ratios. ...
** Charges from
X-ray absorption spectra
An X-ray, or, much less commonly, X-radiation, is a penetrating form of high-energy electromagnetic radiation. Most X-rays have a wavelength ranging from 10 Picometre, picometers to 10 Nanometre, nanometers, corresponding to frequency, ...
** Charges from
ligand-field splittings
** Charges from
UV-vis intensities of transition metal complexes
** Charges from other spectroscopies, such as
NMR
Nuclear magnetic resonance (NMR) is a physical phenomenon in which nuclei in a strong constant magnetic field are perturbed by a weak oscillating magnetic field (in the near field) and respond by producing an electromagnetic signal with ...
,
EPR,
EQR
* Charges from other experimental data
** Charges from
bandgap
In solid-state physics, a band gap, also called an energy gap, is an energy range in a solid where no electronic states can exist. In graphs of the electronic band structure of solids, the band gap generally refers to the energy difference (in ...
s or
dielectric constant
The relative permittivity (in older texts, dielectric constant) is the permittivity of a material expressed as a ratio with the electric permittivity of a vacuum. A dielectric is an insulating material, and the dielectric constant of an insulat ...
s
** Apparent charges from the
piezoelectric effect
Piezoelectricity (, ) is the electric charge that accumulates in certain solid materials—such as crystals, certain ceramics, and biological matter such as bone, DNA, and various proteins—in response to applied Stress (mechanics), mechanical s ...
** Charges derived from
adiabatic potential energy curves
**
Electronegativity
Electronegativity, symbolized as , is the tendency for an atom of a given chemical element to attract shared electrons (or electron density) when forming a chemical bond. An atom's electronegativity is affected by both its atomic number and the d ...
-based charges
** Other physicochemical data, such as
equilibrium and
reaction rate constant In chemical kinetics a reaction rate constant or reaction rate coefficient, ''k'', quantifies the rate and direction of a chemical reaction.
For a reaction between reactants A and B to form product C
the reaction rate is often found to have the ...
s,
thermochemistry
Thermochemistry is the study of the heat energy which is associated with chemical reactions and/or phase changes such as melting and boiling. A reaction may release or absorb energy, and a phase change may do the same. Thermochemistry focuses on ...
, and liquid densities.
*
Formal charge
In chemistry, a formal charge (F.C. or q), in the covalent view of chemical bonding, is the charge assigned to an atom in a molecule, assuming that electrons in all chemical bonds are shared equally between atoms, regardless of relative electroneg ...
s
References
* {{cite book , author = Frank Jensen , title = Introduction to Computational Chemistry , date = 29 November 2006 , edition = 2nd , publisher = Wiley , isbn = 978-0-470-01187-4
Computational chemistry
Electric charge