Nathaniel Thomas may refer to:
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Nathaniel Thomas (writer) (1730–?), Welsh writer and editor
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Nathaniel Phillips Smith Thomas (1844–1890), American politician
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Nathaniel Thomas (Massachusetts judge) (1643–1718), English colonial magistrate, politician, and militia officer
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Nathaniel S. Thomas (1867–1937), bishop of the Episcopal Diocese of Wyoming
{{hndis, Thomas, Nathaniel