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Michael Bruce Eisen (born April 13, 1967) is an American computational biologist and the editor-in-chief of the journal
eLife ''eLife'' is a not-for-profit, peer-reviewed, open access, scientific journal for the biomedical and life sciences. It was established at the end of 2012 by the Howard Hughes Medical Institute, Max Planck Society, and Wellcome Trust, following a ...
. He is a professor of
genetics Genetics is the study of genes, genetic variation, and heredity in organisms.Hartl D, Jones E (2005) It is an important branch in biology because heredity is vital to organisms' evolution. Gregor Mendel, a Moravian Augustinian friar working i ...
,
genomics Genomics is an interdisciplinary field of biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of its genes as well as its hierarchical, three-dim ...
and
development Development or developing may refer to: Arts *Development hell, when a project is stuck in development *Filmmaking, development phase, including finance and budgeting *Development (music), the process thematic material is reshaped *Photographi ...
at
University of California, Berkeley The University of California, Berkeley (UC Berkeley, Berkeley, Cal, or California) is a public land-grant research university in Berkeley, California. Established in 1868 as the University of California, it is the state's first land-grant univ ...
. He is a leading advocate of open access scientific publishing and is co-founder of Public Library of Science (PLOS). In 2018, Eisen announced his candidacy U.S. Senate from California as an
Independent Independent or Independents may refer to: Arts, entertainment, and media Artist groups * Independents (artist group), a group of modernist painters based in the New Hope, Pennsylvania, area of the United States during the early 1930s * Independe ...
, though he failed to qualify for the ballot.


Early life and education

Born in Boston, Eisen and his brother Jonathan were raised in a family of scientists. Their grandfather was an x-ray crystallographer, their father, Howard Eisen a physician, and mother, Laura a biochemist. They moved to
Bethesda, Maryland Bethesda () is an unincorporated, census-designated place in southern Montgomery County, Maryland. It is located just northwest of Washington, D.C. It takes its name from a local church, the Bethesda Meeting House (1820, rebuilt 1849), which i ...
when Eisen was four or five years old. The brothers spent summers in Long Island with their grandparents. Eisen states that he loved frogs and salamanders '"Even more than I have a frog fetish, I have a swamp fetish. I really like being in swamps."' He was also very interested in math and was captain of the high school math team. Eisen graduated from Walt Whitman High School in 1985. Intending to major in mathematics at Harvard University, he realized that there e may encounterother more brilliant math students, it was a ''
Good Will Hunting ''Good Will Hunting'' is a 1997 American psychological drama film directed by Gus Van Sant, and written by Ben Affleck and Matt Damon. It stars Robin Williams, Damon, Affleck, Stellan Skarsgård and Minnie Driver. The film received positive re ...
'' moment and he decided that he did not want to major in mathematics, '"You don't want to be Salieri to Mozart."' During his years at Harvard, Eisen worked on "unlocking the three-dimensional structures of proteins." He was shown a
DNA microarray A DNA microarray (also commonly known as DNA chip or biochip) is a collection of microscopic DNA spots attached to a solid surface. Scientists use DNA microarrays to measure the expression levels of large numbers of genes simultaneously or to g ...
which taught him a '"new way of doing biology"'. Eisen completed his PhD at
Harvard University Harvard University is a private Ivy League research university in Cambridge, Massachusetts. Founded in 1636 as Harvard College and named for its first benefactor, the Puritan clergyman John Harvard, it is the oldest institution of higher le ...
in biophysics and a B.S. (also from Harvard) in Math. He was under the supervision of
Don Craig Wiley Don, don or DON and variants may refer to: Places *County Donegal, Ireland, Chapman code DON *Don (river), a river in European Russia * Don River (disambiguation), several other rivers with the name * Don, Benin, a town in Benin * Don, Dang, a v ...
while studying
Influenza A virus '' A virus'' (''IAV'') causes influenza in birds and some mammals, and is the only species of the genus ''Alphainfluenzavirus'' of the virus family ''Orthomyxoviridae''. Strains of all subtypes of influenza A virus have been isolated from wild ...
Proteins. After earning his doctorate, Eisen was a Postdoctoral Fellow at
Stanford University Stanford University, officially Leland Stanford Junior University, is a private research university in Stanford, California. The campus occupies , among the largest in the United States, and enrolls over 17,000 students. Stanford is considere ...
in the lab of
David Botstein David Botstein (born September 8, 1942) is an American biologist serving as the chief scientific officer of Calico. He served as the director of the Lewis-Sigler Institute for Integrative Genomics at Princeton University from 2003 to 2013, where ...
, where he most notably developed a method for interpreting gene expression data from microarrays. The seminal research publication that Eisen authored about this project has been cited over 16,000 times.


Baseball and biology

When Eisen lived in Tennessee he worked as a
play-by-play announcer In sports broadcasting, a sports commentator (also known as sports announcer or sportscaster) provides a real-time commentary of a game or event, usually during a live broadcast, traditionally delivered in the historical present tense. Radio was ...
for a minor league baseball team, the Columbia Mules. He is a self-proclaimed
Red Sox The Boston Red Sox are an American professional baseball team based in Boston. The Red Sox compete in Major League Baseball (MLB) as a member club of the American League (AL) East division. Founded in as one of the American League's eigh ...
fanatic. He and computational biologist James Fraser recorded a video for iBiology about the role baseball statistics influenced their research. Their argument is that sequencing DNA is similar to scoring a baseball game, and that many computational biologists learned to think about science computations from an obsessive interest in baseball stats. The exercise of comparing a specific player's stats to a database of other similar players allows a baseball fan to predict future performance. This same system works with proteins and predicting functions. As tools are developed that break down and track all stats concerning baseball players, so will technology improve with genetics. With both baseball and genetics, tools are being developed that refine the models. In a lecture in 2015, Eisen stated that he received a computer from his grandfather for his twelfth birthday and spent the next five years teaching himself how to program so that he could keep track of baseball stats.


Research

His academic research focuses on the
evolution Evolution is change in the heritable characteristics of biological populations over successive generations. These characteristics are the expressions of genes, which are passed on from parent to offspring during reproduction. Variation ...
of
gene regulation Regulation of gene expression, or gene regulation, includes a wide range of mechanisms that are used by cells to increase or decrease the production of specific gene products (protein or RNA). Sophisticated programs of gene expression are wide ...
. Despite this focus, Eisen's work has historically spanned very diverse disciplines. For example, his 5 most cited papers cover a broad range of topics including methods for
hierarchical clustering In data mining and statistics, hierarchical clustering (also called hierarchical cluster analysis or HCA) is a method of cluster analysis that seeks to build a hierarchy of clusters. Strategies for hierarchical clustering generally fall into tw ...
, applications to human breast cancers (with
David Botstein David Botstein (born September 8, 1942) is an American biologist serving as the chief scientific officer of Calico. He served as the director of the Lewis-Sigler Institute for Integrative Genomics at Princeton University from 2003 to 2013, where ...
and Charles Perou), and discovery of tumor subtypes in diffuse large B cell lymphoma (with
Ash Alizadeh Ash or ashes are the solid remnants of fires. Specifically, ''ash'' refers to all non-aqueous, non- gaseous residues that remain after something burns. In analytical chemistry, to analyse the mineral and metal content of chemical samples, a ...
and Louis Staudt). His more recent research work has been on
fruit flies Fruit fly may refer to: Organisms * Drosophilidae, a family of small flies, including: ** ''Drosophila'', the genus of small fruit flies and vinegar flies ** ''Drosophila melanogaster'' or common fruit fly ** '' Drosophila suzukii'' or Asian fruit ...
and
Drosophila ''Drosophila'' () is a genus of flies, belonging to the family Drosophilidae, whose members are often called "small fruit flies" or (less frequently) pomace flies, vinegar flies, or wine flies, a reference to the characteristic of many species ...
and how they "develop from a tiny single-celled egg to a mature adult. He says they hold insights into what goes wrong in people as they age." He receives funding from the
Howard Hughes Medical Institute The Howard Hughes Medical Institute (HHMI) is an American non-profit medical research organization based in Chevy Chase, Maryland. It was founded in 1953 by Howard Hughes, an American business magnate, investor, record-setting pilot, engineer, fi ...
for his research.


2018 U.S. Senate race

Eisen announced through Twitter on January 25 his intent to run for U.S. Senate from California in 2018 for Democratic Senator
Dianne Feinstein Dianne Goldman Berman Feinstein ( ; born Dianne Emiel Goldman; June 22, 1933) is an American politician who serves as the senior United States senator from California, a seat she has held since 1992. A member of the Democratic Party, she was ...
's seat, registering the Twitter handle ''SenatorPhD''. His campaign slogan was "Liberty, Equality, Reality". Eisen's reasons for running for Congress included his perception that the
Trump administration Donald Trump's tenure as the 45th president of the United States began with his inauguration on January 20, 2017, and ended on January 20, 2021. Trump, a Republican from New York City, took office following his Electoral College victory ...
was unresponsive to climate change and other science-related issues. Another reason Eisen decided to run was his experience watching Cabinet appointees being interviewed by the Senate about climate change. He thought '“It would be really nice to have scientists ask the questions of the Cabinet appointees, because the senators don’t seem to understand the issue and aren’t asking the right questions.”' He feels that if science is to be on the forefront of policy making, '"scientists need to run for office."' He felt that 2018's California jungle primaries afforded him a better chance at making the final two for the general election, but he did not make the final two (which were Dianne Feinstein and
Kevin de León Kevin Alexander Leon (born December 10, 1966), known professionally as Kevin de León and colloquially as KDL, is an American politician serving as the Los Angeles City Council member for district 14 since 2020. A member of the Democratic Party, ...
). Eisen dropped out of the race when he failed to qualify for the June 2018 primary ballot.


Open Access advocacy

Throughout his career he has been an advocate for " open science", which is the free release of the material and intellectual product of scientific research. He is a leading advocate of open access scientific publishing and is co-founder of Public Library of Science (PLOS) and serves on the PLOS board, the Academic Steering & Advocacy Committee of
Open Library of Humanities The Open Library of Humanities is a nonprofit, diamond open access publisher in the humanities and social sciences founded by Martin Paul Eve and Caroline Edwards. Founded in 2015, OLH publishes 27 scholarly journals as of 2022, including a meg ...
, and is an adviser to
Science Commons Science Commons (SC) was a Creative Commons project for designing strategies and tools for faster, more efficient web-enabled scientific research. The organization's goals were to identify unnecessary barriers to research, craft policy guideline ...
. In 2012 Eisen began protesting against the
Research Works Act The Research Works Act, 102 H.R. 3699, was a bill that was introduced in the United States House of Representatives at the 112th United States Congress on December 16, 2011, by Representative Darrell Issa (R-CA) and co-sponsored by Carolyn B. Ma ...
as part of his appeal to promote open access to information.


Awards and honors

In 2002, Eisen was awarded the inaugural Benjamin Franklin Award in bioinformatics, for his work on
PLOS PLOS (for Public Library of Science; PLoS until 2012 ) is a nonprofit publisher of open-access journals in science, technology, and medicine and other scientific literature, under an open-content license. It was founded in 2000 and launc ...
and the open-access availability of his microarray cluster analysis software.


References


External links


It is NOT junk - Personal blog of Michael EisenOpen_letter_to_President_Trump_to_replace_Francis_Collins
_as_NIH_Director.html" ;"title="Francis Collins">Open letter to President Trump to replace Francis Collins
as NIH Director">Francis Collins">Open letter to President Trump to replace Francis Collins
as NIH Directorbr>Michael Eisen (I) for Senate
{{DEFAULTSORT:Eisen, Michael 1967 births Living people 21st-century American biologists American bioinformaticians Harvard College alumni University of California, Berkeley faculty Howard Hughes Medical Investigators Founders PLOS people American scientists Harvard Graduate School of Arts and Sciences alumni Candidates in the 2018 United States Senate elections