ModBase is a database of annotated comparative protein structure models, containing models for more than 3.8 million unique protein sequences. Models are created by the

comparative modeling Homology modeling, also known as comparative modeling of protein, refers to constructing an atomic-resolution model of the "''target''" protein from its amino acid sequence and an experimental three-dimensional structure of a related homologous pr ...

pipeline ModPipe which relies on the

MODELLER Modeller, often stylized as MODELLER, is a computer program used for homology modeling to produce models of protein tertiary structures and quaternary structures (rarer). It implements a method inspired by nuclear magnetic resonance spectroscopy ...

program. ModBase is developed in the laboratory of

Andrej Sali Andrey, Andrej or Andrei (in Cyrillic script: Андрей, Андреј or Андрэй) is a form of Andreas/Ἀνδρέας in Slavic languages and Romanian. People with the name include: *Andrei of Polotsk ( – 1399), Lithuanian nobleman *An ...

UCSF The University of California, San Francisco (UCSF) is a public land-grant research university in San Francisco, California. It is part of the University of California system and is dedicated entirely to health science and life science. It condu ...

. ModBase models are also accessible through the

Protein Model Portal Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respond ...

References

External links

* http://salilab.org/modbase Biological databases Protein methods Protein structure {{Biodatabase-stub

See also

References

External links