Lactobacillus Pontis
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''Limosilactobacillus pontis'' is a
rod-shaped A bacillus (), also called a bacilliform bacterium or often just a rod (when the context makes the sense clear), is a rod-shaped bacterium or archaeon. Bacilli are found in many different taxonomic groups of bacteria. However, the name ''Bacillu ...
, Gram-positive facultatively anaerobic bacterium. Along with other '' Lactobacillus'' species, it is capable of converting sugars, such as
lactose Lactose is a disaccharide sugar synthesized by galactose and glucose subunits and has the molecular formula C12H22O11. Lactose makes up around 2–8% of milk (by mass). The name comes from ' (gen. '), the Latin word for milk, plus the suffix '' - ...
, into lactic acid. ''Limosilactobacillus pontis'' is classified under the phylum Bacillota, class Bacilli, and is a member of the family Lactobacillaceae and is found to be responsible for the
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
of
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
, along with many other '' Lactobacillus'' species. This microorganism produces lactic acid during the process of
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
, which gives
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
bread its characteristic sour taste.


History and discovery

In 1994, ''Limosilactobacillus pontis'' was discovered during an experiment focusing on the microflora found in
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
preparations for making
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
bread. Scientists isolated ''Limosilactobacillus pontis'' as well as many common species such as ''
Limosilactobacillus reuteri ''Limosilactobacillus reuteri'' is a lactic acid bacterium found in a variety of natural environments, including the gastrointestinal tract of humans and other animals. It does not appear to be pathogenic and may have health effects. Discove ...
'', '' Levilactobacillus brevis'', and ''
Fructilactobacillus sanfranciscensis ''Fructilactobacillus sanfranciscensis'' is a heterofermentative species of lactic acid bacteria which, through the production mainly of lactic and acetic acids, helps give sourdough bread its characteristic taste. It is named after San Franc ...
'' by investigating protein patterns in cells,
physiological Physiology (; ) is the scientific study of functions and mechanisms in a living system. As a sub-discipline of biology, physiology focuses on how organisms, organ systems, individual organs, cells, and biomolecules carry out the chemical ...
features, and running
16S rRNA 16S rRNA may refer to: * 16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome ( SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The g ...
sequences to look at each '' Lactobacillus'' species separately. An isolate from
rye Rye (''Secale cereale'') is a grass grown extensively as a grain, a cover crop and a forage crop. It is a member of the wheat tribe (Triticeae) and is closely related to both wheat (''Triticum'') and barley (genus ''Hordeum''). Rye grain is u ...
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
was discovered to be a new species by reason of protein configurations,
physiological Physiology (; ) is the scientific study of functions and mechanisms in a living system. As a sub-discipline of biology, physiology focuses on how organisms, organ systems, individual organs, cells, and biomolecules carry out the chemical ...
features, and by
GC-content In molecular biology and genetics, GC-content (or guanine-cytosine content) is the percentage of nitrogenous bases in a DNA or RNA molecule that are either guanine (G) or cytosine (C). This measure indicates the proportion of G and C bases out o ...
.


Phylogeny

''Limosilactobacillus pontis'' was classified as a new species based on the
16S rRNA 16S rRNA may refer to: * 16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome ( SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The g ...
gene sequence. Strain LTH 2587T, also known as DSM 8475/ LMG 14187, was the first strain discovered and named. Other strain names include the following: ATCC 51518, CCM 4540, CCUG 33456, CIP 104232, JCM 11051, KCTC 5074, NCIMB 13406, and VTT E-052865.


Use in food production

''Limosilactobacillus pontis'' is used in the starter for making
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
bread. The starter consists of water, flour, yeast, and the
starter culture A fermentation starter (called simply starter within the corresponding context, sometimes called a mother) is a preparation to assist the beginning of the fermentation process in preparation of various foods and alcoholic drinks. Food groups wh ...
of bacteria. The bacteria begin
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
by breaking down the sugars, forming lactic acid in the process.Luc DV and Patricia N. (2005) The sourdough microflora: biodiversity and metabolic interactions. Trends in food science and technology. 16:43-5
Food Science
/ref> This process lowers the pH of the solution, producing a "sour" taste in the final product. ''Limosilactobacillus pontis'' breaks down sugars that cannot be
metabolized Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
by the yeast in the culture, just as many '' Lactobacillus'' species do. When wheat flour and water are in solution together, the amylase enzymes present breakdown the
starch Starch or amylum is a polymeric carbohydrate consisting of numerous glucose units joined by glycosidic bonds. This polysaccharide is produced by most green plants for energy storage. Worldwide, it is the most common carbohydrate in human diets ...
into
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
, and maltase performs a further breakdown into glucose. The lactic acid producing bacteria are responsible for breaking down sugars and the yeast uses by-products from this process to form carbon dioxide. The carbon dioxide causes leavening in the dough. Species of sourdough
lactobacilli The ''Lactobacillaceae'' are a family of lactic acid bacteria. It is the only family in the lactic acid bacteria which includes homofermentative and heterofermentative organisms; in the ''Lactobacillaceae,'' the pathway used for hexose fermentati ...
exhibit unique technological properties related to the flavor, texture, and shelf-life of
sourdough Sourdough or sourdough bread is a bread made by the fermentation of dough using wild lactobacillaceae and yeast. Lactic acid from fermentation imparts a sour taste and improves keeping qualities. History In the ''Encyclopedia of Food Microbio ...
bread. ''Limosilactobacillus pontis'' expresses genes coding for Cystathionine lyase (Cxl), which contributes to the development of flavor in the process of cheese ripening and it is shown to improve the taste and flavor of bread.Asa L and Torkel W. (2009) ''Lactobacillus'' molecular biology: From genomics to probiotics. Exopolysaccharides (EPS) produced by lactic acid bacteria are used as alternative biothickeners for viscosification, stabilization,
emulsification An emulsion is a mixture of two or more liquids that are normally Miscibility, immiscible (unmixable or unblendable) owing to liquid-liquid phase separation. Emulsions are part of a more general class of two-phase systems of matter called colloi ...
, and gelling in a variety of food products. EPS are generally classified in two groups: homopolysaccharides (HoPS), commonly known as glucose or
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
polymers, and
heteropolysaccharide Polysaccharides (), or polycarbohydrates, are the most abundant carbohydrates found in food. They are long chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with wa ...
s. Currently only HoPS have been shown to be useful in making bread. Various sourdough-associated lactic acid bacteria synthesize glucans and fructans by extracellular glucansucrases or fructansucrases, respectively. ''L. pontis'', ''L. panis'', ''L. reuteri'', ''
Limosilactobacillus frumenti ''Limosilactobacillus'' is a thermophilic and heterofermentative genus of lactic acid bacteria created in 2020 by splitting from ''Lactobacillus''. The name is derived from the Latin "slimy", referring to the property of most strains in the genu ...
'' and ''F. sanfranciscensis'' have been shown to produce fructans (levan or inulin) and glucans (dextran, reuteran or mutan).Marco G and Michael G. (2013) Handbook on sourdough biotechnology.


Genomics

''Limosilactobacillus pontis'' LTH 2585 and LTH 2586 possess a GC content of 53%. Strain LTH 2587 was determined to have a 53.3% GC content. ''Limosilactobacillus pontis'' strain LTH 2587
16S rRNA 16S rRNA may refer to: * 16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome ( SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The g ...
gene sequenced at 1570 base pairs. ''Limosilactobacillus pontis'' strain DSM 8475
16S rRNA 16S rRNA may refer to: * 16S ribosomal RNA 16 S ribosomal RNA (or 16 S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome ( SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The g ...
-
23S rRNA 3S may refer to: * 3S, for single, seventies/1970s, stuck, a slang form of sheng nu, a derogatory Chinese term referring to unmarried women in their mid to late twenties * 3S gondola lift * 3-S treatment, a method for dealing with unwanted or unwelc ...
small intergenic spacer was also sequenced at 207 base pairs along with the large intergenic spacer, tRNA-Ile, and tRNA-Ala genes at 403 base pairs for the complete sequence. Other genes that have been sequenced include the following: Partial ''pheS gene'' for phenylalanyl-tRNA synthase alpha subunit for strain LMG 14188 and strain LMG 14187T. Partial ''tuf'' gene for elongation factor tu, type strain DSM 8474T. Partial '' recA'' gene for recombinase A, strain LMG 14187T. Complete ''rpoA'' gene for
RNA polymerase In molecular biology, RNA polymerase (abbreviated RNAP or RNApol), or more specifically DNA-directed/dependent RNA polymerase (DdRP), is an enzyme that synthesizes RNA from a DNA template. Using the enzyme helicase, RNAP locally opens the ...
alpha subunit, type strain LMG 14187T.


Physiology

The sourdough
lactobacilli The ''Lactobacillaceae'' are a family of lactic acid bacteria. It is the only family in the lactic acid bacteria which includes homofermentative and heterofermentative organisms; in the ''Lactobacillaceae,'' the pathway used for hexose fermentati ...
including ''
Fructilactobacillus sanfranciscensis ''Fructilactobacillus sanfranciscensis'' is a heterofermentative species of lactic acid bacteria which, through the production mainly of lactic and acetic acids, helps give sourdough bread its characteristic taste. It is named after San Franc ...
'', ''L. pontis'', ''
Limosilactobacillus panis ''Limosilactobacillus'' is a thermophilic and heterofermentative genus of lactic acid bacteria created in 2020 by splitting from ''Lactobacillus''. The name is derived from the Latin "slimy", referring to the property of most strains in the genu ...
'', ''
Lactiplantibacillus paraplantarum ''Lactiplantibacillus paraplantarum'' is a rod-shaped species of lactic acid bacteria first isolated from beer and human faeces. It is facultatively heterofermentative Fermentation is a metabolic process that produces chemical changes in or ...
'', '' Companilactobacillus mindensis'' are considered typical to sourdough environments, especially with an extended
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
period and/or higher temperatures. ''Limosilactobacillus pontis'' seems to remain dominant for a long time during continuous propagation of sourdoughs suggesting their essential role for
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
. Additionally, they are enriched during continuous dough propagation. Their persistence ascribes to their competitive metabolisms and
adaptation In biology, adaptation has three related meanings. Firstly, it is the dynamic evolutionary process of natural selection that fits organisms to their environment, enhancing their evolutionary fitness. Secondly, it is a state reached by the po ...
to this environment. The following are some factors contributing to their dominance/persistence in sourdough
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
. Firstly, their carbohydrate metabolism is highly adapted to the main energy sources in dough,
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
and
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
. Use of
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
via
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
phosphorylase and the pentose phosphate shunt with
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
as
co-substrate A cofactor is a non- protein chemical compound or metallic ion that is required for an enzyme's role as a catalyst (a catalyst is a substance that increases the rate of a chemical reaction). Cofactors can be considered "helper molecules" tha ...
results in a higher energy yield than homofermentative
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
degradation. Secondly, the temperature and pH for their growth fit the conditions of sourdough
fermentation Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
. The persistent coexistence of these microorganisms in the same context may result from their similar growth rates, in turn determined by temperature and pH. Thirdly, they own some stress response mechanisms to overcome high/low temperatures, high dehydration/ osmolarity,
acid In computer science, ACID ( atomicity, consistency, isolation, durability) is a set of properties of database transactions intended to guarantee data validity despite errors, power failures, and other mishaps. In the context of databases, a sequ ...
, oxidation, and
starvation Starvation is a severe deficiency in caloric energy intake, below the level needed to maintain an organism's life. It is the most extreme form of malnutrition. In humans, prolonged starvation can cause permanent organ damage and eventually, dea ...
. Finally, they produce antimicrobial compounds, such as
organic acid An organic acid is an organic compound with acidic properties. The most common organic acids are the carboxylic acids, whose acidity is associated with their carboxyl group –COOH. Sulfonic acids, containing the group –SO2OH, are rel ...
s (
lactate Lactate may refer to: * Lactation, the secretion of milk from the mammary glands * Lactate, the conjugate base of lactic acid Lactic acid is an organic acid. It has a molecular formula . It is white in the solid state and it is miscible with ...
,
acetate An acetate is a salt (chemistry), salt formed by the combination of acetic acid with a base (e.g. Alkali metal, alkaline, Alkaline earth metal, earthy, Transition metal, metallic, nonmetallic or radical Radical (chemistry), base). "Acetate" als ...
, and others), bacteriocins, and reutericyclin to enhance their competitiveness against a wide range of bacteria. However, the temperature is an important factor strongly impacting the competitiveness of lactobacilli in sourdough fermentation. For example, at a high temperature of 40 °C, ''L. frumenti'' and ''L. panis'' are dominating over ''L. pontis'' and '' L. reuteri''. The sourdough lactic acid bacteria's response to high salt concentration is species specific. In general,
obligate {{wiktionary, obligate As an adjective, obligate means "by necessity" (antonym ''facultative'') and is used mainly in biology in phrases such as: * Obligate aerobe, an organism that cannot survive without oxygen * Obligate anaerobe, an organism that ...
heterofermentative Fermentation is a metabolic process that produces chemical changes in organic substrates through the action of enzymes. In biochemistry, it is narrowly defined as the extraction of energy from carbohydrates in the absence of oxygen. In food ...
lactobacilli are more sensitive to NaCl compared to other lactobacilli. For instance, ''L. pontis'' and '' F. sanfranciscensis'' are inhibited by 4% NaCl, while '' L. paraplantarum'' and ''
Lactobacillus amylovorus ''Lactobacillus'' is a genus of Gram-positive, aerotolerant anaerobes or microaerophilic, rod-shaped, non-spore-forming bacteria. Until 2020, the genus ''Lactobacillus'' comprised over 260 phylogenetically, ecologically, and metabolically di ...
'' can tolerate up to 6% NaCl.


Metabolism

The most primary
metabolic activity Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
of these microorganisms in sourdough is to produce
acid In computer science, ACID ( atomicity, consistency, isolation, durability) is a set of properties of database transactions intended to guarantee data validity despite errors, power failures, and other mishaps. In the context of databases, a sequ ...
and carbon dioxide; gas production is necessary for the dough leavening if yeast is not added. ''Limosilactobacillus pontis'' is capable of using
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
as a carbon source and convert
stoichiometrically Stoichiometry refers to the relationship between the quantities of reactants and products before, during, and following chemical reactions. Stoichiometry is founded on the law of conservation of mass where the total mass of the reactants equals ...
convert
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
to lactic acid and ethanol. However, when
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
is present, they use it chiefly as an
electron acceptor An electron acceptor is a chemical entity that accepts electrons transferred to it from another compound. It is an oxidizing agent that, by virtue of its accepting electrons, is itself reduced in the process. Electron acceptors are sometimes mista ...
, and
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
is reduced to mannitol. It can also
metabolize Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
ribose, D-raffinose, and gluconate, but cannot use glucose,
L-arabinose Arabinose is an aldopentose – a monosaccharide containing five carbon atoms, and including an aldehyde (CHO) functional group. For biosynthetic reasons, most saccharides are almost always more abundant in nature as the "D"-form, or structural ...
,
D-xylose Xylose ( grc, ξύλον, , "wood") is a sugar first isolated from wood, and named for it. Xylose is classified as a monosaccharide of the aldopentose type, which means that it contains five carbon atoms and includes an aldehyde functional gro ...
, galactose, aesculin,
lactose Lactose is a disaccharide sugar synthesized by galactose and glucose subunits and has the molecular formula C12H22O11. Lactose makes up around 2–8% of milk (by mass). The name comes from ' (gen. '), the Latin word for milk, plus the suffix '' - ...
or melibiose. Its main products from fermenting
fructose Fructose, or fruit sugar, is a Ketose, ketonic monosaccharide, simple sugar found in many plants, where it is often bonded to glucose to form the disaccharide sucrose. It is one of the three dietary monosaccharides, along with glucose and galacto ...
or
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
are
lactate Lactate may refer to: * Lactation, the secretion of milk from the mammary glands * Lactate, the conjugate base of lactic acid Lactic acid is an organic acid. It has a molecular formula . It is white in the solid state and it is miscible with ...
,
acetate An acetate is a salt (chemistry), salt formed by the combination of acetic acid with a base (e.g. Alkali metal, alkaline, Alkaline earth metal, earthy, Transition metal, metallic, nonmetallic or radical Radical (chemistry), base). "Acetate" als ...
, ethanol, glycerol, and carbon dioxide. Limosilactobacillus pontis cannot use citrate as an
electron acceptor An electron acceptor is a chemical entity that accepts electrons transferred to it from another compound. It is an oxidizing agent that, by virtue of its accepting electrons, is itself reduced in the process. Electron acceptors are sometimes mista ...
in the presence of
maltose } Maltose ( or ), also known as maltobiose or malt sugar, is a disaccharide formed from two units of glucose joined with an α(1→4) bond. In the isomer isomaltose, the two glucose molecules are joined with an α(1→6) bond. Maltose is the two- ...
. There is also no presence of
catalase Catalase is a common enzyme found in nearly all living organisms exposed to oxygen (such as bacteria, plants, and animals) which catalyzes the decomposition of hydrogen peroxide to water and oxygen. It is a very important enzyme in protecting t ...
activity. ''Limosilactobacillus pontis'' has the ability to
catabolize Catabolism () is the set of metabolic pathways that breaks down molecules into smaller units that are either oxidized to release energy or used in other anabolic reactions. Catabolism breaks down large molecules (such as polysaccharides, lipid ...
arginine Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the am ...
. Three enzymes are involved in the process; including
arginine Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the am ...
deaminase Deamination is the removal of an amino group from a molecule. Enzymes that catalyse this reaction are called deaminases. In the human body, deamination takes place primarily in the liver, however it can also occur in the kidney. In situations of ...
(ADI),
ornithine carbamoyltransferase Ornithine transcarbamylase (OTC) (also called ornithine carbamoyltransferase) is an enzyme () that catalyzes the reaction between carbamoyl phosphate (CP) and ornithine (Orn) to form citrulline (Cit) and phosphate (Pi). There are two classes of OT ...
(OTC), and
carbamate kinase In enzymology, a carbamate kinase () is an enzyme that catalyzes the chemical reaction :ATP + NH3 + CO2 \rightleftharpoons ADP + carbamoyl phosphate The 3 substrates of this enzyme are ATP, NH3, and CO2, whereas its two products are ADP and ...
(CK). A fourth protein located at the cell membrane acts as transporter, allowing the
antiporter An antiporter (also called exchanger or counter-transporter) is a cotransporter and integral membrane protein involved in secondary active transport of two or more different molecules or ions across a phospholipid membrane such as the plasma memb ...
exchange between
arginine Arginine is the amino acid with the formula (H2N)(HN)CN(H)(CH2)3CH(NH2)CO2H. The molecule features a guanidino group appended to a standard amino acid framework. At physiological pH, the carboxylic acid is deprotonated (−CO2−) and both the am ...
and ornithine.


Probiotics

A probiotic organism such as ''Limosilactobacillus pontis'', and other lactobacilli, help by balancing numbers of normal microflora in the human body. Probiotics also give some protection against pathogens, lower levels of cholesterol, cause stimulation of the immune response, and in some cases, protect against specific types of cancer. There are potential health benefits by using these lactobacilli in commercial food products such as the lactic acid
fermented beverage This is a list of fermented foods, which are foods produced or preserved by the action of microorganisms. In this context, fermentation typically refers to the fermentation of sugar to alcohol using yeast, but other fermentation processes involv ...
hardaliye Hardaliye is a lactic acid fermented beverage produced from grapes, crushed mustard seeds, sour cherry leaves, and benzoic acid. It is an indigenous drink of the Trakya region of Turkey in southeastern Europe. A 2013 study showed that the ingesti ...
, which is made from the natural fermentation of the red grape or grape juice. ''Limosilactobacillus pontis'' has the ability to induce
NOD2 Nucleotide-binding oligomerization domain-containing protein 2 (NOD2), also known as caspase recruitment domain-containing protein 15 (CARD15) or inflammatory bowel disease protein 1 (IBD1), is a protein that in humans is encoded by the ''NOD2'' g ...
pathway where
NOD2 Nucleotide-binding oligomerization domain-containing protein 2 (NOD2), also known as caspase recruitment domain-containing protein 15 (CARD15) or inflammatory bowel disease protein 1 (IBD1), is a protein that in humans is encoded by the ''NOD2'' g ...
plays a key role in the immune system by recognizing bacterial molecules and stimulating an immune reaction.
NOD2 Nucleotide-binding oligomerization domain-containing protein 2 (NOD2), also known as caspase recruitment domain-containing protein 15 (CARD15) or inflammatory bowel disease protein 1 (IBD1), is a protein that in humans is encoded by the ''NOD2'' g ...
is a nucleotide-binding oligomerization domain-containing protein, which is also known as
caspase recruitment domain Caspase recruitment domains, or caspase activation and recruitment domains (CARDs), are interaction motifs found in a wide array of proteins, typically those involved in processes relating to inflammation and apoptosis. These domains mediate th ...
. It may commonly be referred to as an
Inflammatory bowel disease Inflammatory bowel disease (IBD) is a group of inflammation, inflammatory conditions of the colon (anatomy), colon and small intestine, Crohn's disease and ulcerative colitis being the principal types. Crohn's disease affects the small intestine a ...
protein.Haruki Kitazawa, Julio Villena, Susana Alvarez. 2013. Probiotics: Immunobiotics and immunogenetics. CRC Press.


References


External links


Vogel 1994

L. pontis Muliplex PCRType strain of ''Lactobacillus pontis'' at Bac''Dive'' - the Bacterial Diversity Metadatabase


Further reading


Lactobacillus pontis Encyclopedia of Life

L. pontis Strain Info

Taxonomy Browser

RNA polymerase alpha subunit

Lactobacillus Molecular Biology: From Genomics to Probiotics



National Agricultural Library

LPSN lpsn.dsmz.de
{{Taxonbar, from=Q3825324 Lactobacillaceae Bacteria described in 1994