Kira Makarova
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Kira S. Makarova (russian: Кира Макарова) is an Estonian-American
evolutionary biologist Evolutionary biology is the subfield of biology that studies the evolutionary processes (natural selection, common descent, speciation) that produced the diversity of life on Earth. It is also defined as the study of the history of life for ...
known for her research on the biology of
CRISPR CRISPR () (an acronym for clustered regularly interspaced short palindromic repeats) is a family of DNA sequences found in the genomes of prokaryotic organisms such as bacteria and archaea. These sequences are derived from DNA fragments of bacte ...
and
Cas9 Cas9 (CRISPR associated protein 9, formerly called Cas5, Csn1, or Csx12) is a 160 kilodalton protein which plays a vital role in the immunological defense of certain bacteria against DNA viruses and plasmids, and is heavily utilized in genetic e ...
. She is a staff scientist at the
National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ...
.


Early life and education

Makarova grew up in
Narva Narva, russian: Нарва is a municipality and city in Estonia. It is located in Ida-Viru County, Ida-Viru county, at the Extreme points of Estonia, eastern extreme point of Estonia, on the west bank of the Narva (river), Narva river which ...
, then part of the
Soviet Union The Soviet Union,. officially the Union of Soviet Socialist Republics. (USSR),. was a transcontinental country that spanned much of Eurasia from 1922 to 1991. A flagship communist state, it was nominally a federal union of fifteen national ...
and later in
Estonia Estonia, formally the Republic of Estonia, is a country by the Baltic Sea in Northern Europe. It is bordered to the north by the Gulf of Finland across from Finland, to the west by the sea across from Sweden, to the south by Latvia, a ...
, and competed at the national level in the Soviet Biology Olympiad. After completing high school she tried unsuccessfully for several years to enter
Moscow State University M. V. Lomonosov Moscow State University (MSU; russian: Московский государственный университет имени М. В. Ломоносова) is a public research university in Moscow, Russia and the most prestigious ...
. She instead entered the Moscow Medical Institute, but after marrying and having a child she moved to
Novosibirsk State University Novosibirsk State University is a public research university located in Novosibirsk, Russia. The university was founded in 1958, on the principles of integration of education and science, early involvement of students with research activities an ...
to be closer to her husband's family. There, the shortages of laboratory supplies led her to work in
computational biology Computational biology refers to the use of data analysis, mathematical modeling and computational simulations to understand biological systems and relationships. An intersection of computer science, biology, and big data, the field also has fo ...
. She completed a master's degree in 1991, and in 1996 completed a doctorate at the
Institute of Cytology and Genetics Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (russian: Институт цитологии и генетики СО РАН) is a research institute based in Novosibirsk, Russia. It was founded in 195 ...
of the
Russian Academy of Sciences The Russian Academy of Sciences (RAS; russian: Росси́йская акаде́мия нау́к (РАН) ''Rossíyskaya akadémiya naúk'') consists of the national academy of Russia; a network of scientific research institutes from across t ...
in Novosibirsk. Her work at the institute involved the design of synthetic
oligonucleotide Oligonucleotides are short DNA or RNA molecules, oligomers, that have a wide range of applications in genetic testing, research, and forensics. Commonly made in the laboratory by solid-phase chemical synthesis, these small bits of nucleic acids c ...
s and, separately, the use of
oligopeptide An oligopeptide, often just called peptide ('' oligo-'', "a few"), consists of two to twenty amino acids and can include dipeptides, tripeptides, tetrapeptides, and pentapeptides. Some of the major classes of naturally occurring oligopeptides incl ...
frequency data to classify
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s.


Later career and research

When Makarova's husband moved to the US to work with
Eugene Koonin Eugene Viktorovich Koonin (Russian: Евге́ний Ви́кторович Ку́нин; born October 26, 1956) is a Russian-American biologist and Senior Investigator at the National Center for Biotechnology Information (NCBI). He is a recognise ...
in the
National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH). It is approved and funded by the government of the United States. The ...
, Koonin found Makarova a position as research fellow at the
Uniformed Services University of the Health Sciences Uniformed Services University of the Health Sciences (USU) is a health science university of the U.S. federal government. The primary mission of the school is to prepare graduates for service to the U.S. at home and abroad in the medical corps as ...
, studying ''
Deinococcus radiodurans ''Deinococcus radiodurans'' is an extremophilic bacterium and one of the most radiation-resistant organisms known. It can survive cold, dehydration, vacuum, and acid, and therefore is known as a polyextremophile. It has been listed as the world ...
'', a bacterium that can survive several different extreme conditions. In 2001, Koonin hired Makarova to join him at NCBI. At the center, beginning in 2006, Makarova and her co-workers investigated the CRISPR-Cas9 system and its biological function as a bacterial
immune system The immune system is a network of biological processes that protects an organism from diseases. It detects and responds to a wide variety of pathogens, from viruses to parasitic worms, as well as cancer cells and objects such as wood splinte ...
. Interest in the system heightened after other researchers subsequently used it to perform
genome editing Genome editing, or genome engineering, or gene editing, is a type of genetic engineering in which DNA is inserted, deleted, modified or replaced in the genome of a living organism. Unlike early genetic engineering techniques that randomly inserts ...
. Makarova's ongoing research involves
comparative genomics Comparative genomics is a field of biological research in which the genomic features of different organisms are compared. The genomic features may include the DNA sequence, genes, gene order, regulatory sequences, and other genomic structural lan ...
, and the genetics and protein functions of
archaea Archaea ( ; singular archaeon ) is a domain of single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotes. Archaea were initially classified as bacteria, receiving the name archaebacteria (in the Archaebac ...
. She is the maintainer of a database of archaeal proteins and their relations.


Notable publications

* ** – Cited by *** ***


References


External links

* {{DEFAULTSORT:Makarova, Kira Year of birth missing (living people) Living people Estonian biologists 20th-century American biologists 21st-century American biologists American women biologists National Institutes of Health people 20th-century American women scientists 21st-century American women scientists Novosibirsk State University alumni Estonian emigrants to the United States Estonian women scientists Computational biologists Evolutionary biologists Women computational biologists Women evolutionary biologists