Ibercivis was a
volunteer computing
Volunteer computing is a type of distributed computing in which people donate their computers' unused resources to a research-oriented project, and sometimes in exchange for credit points. The fundamental idea behind it is that a modern desktop co ...
platform which allows
internet
The Internet (or internet) is the global system of interconnected computer networks that uses the Internet protocol suite (TCP/IP) to communicate between networks and devices. It is a '' network of networks'' that consists of private, pub ...
users to participate in scientific research by donating unused
computer cycles to run scientific simulations and other tasks. The original project, which became operational in 2008, was a scientific collaboration between the
Portuguese
Portuguese may refer to:
* anything of, from, or related to the country and nation of Portugal
** Portuguese cuisine, traditional foods
** Portuguese language, a Romance language
*** Portuguese dialects, variants of the Portuguese language
** Portu ...
and
Spanish
Spanish might refer to:
* Items from or related to Spain:
**Spaniards are a nation and ethnic group indigenous to Spain
**Spanish language, spoken in Spain and many Latin American countries
**Spanish cuisine
Other places
* Spanish, Ontario, Can ...
governments, but it is open to the general public and scientific community, both within and beyond the
Iberian Peninsula
The Iberian Peninsula (),
**
* Aragonese and Occitan: ''Peninsula Iberica''
**
**
* french: Péninsule Ibérique
* mwl, Península Eibérica
* eu, Iberiar penintsula also known as Iberia, is a peninsula in southwestern Europe, def ...
. The project's name is a
portmanteau
A portmanteau word, or portmanteau (, ) is a blend of words[Iberia
The Iberian Peninsula (),
**
* Aragonese and Occitan: ''Peninsula Iberica''
**
**
* french: Péninsule Ibérique
* mwl, Península Eibérica
* eu, Iberiar penintsula also known as Iberia, is a peninsula in southwestern Europe, defi ...](_blank)
'' and the
Latin
Latin (, or , ) is a classical language belonging to the Italic branch of the Indo-European languages. Latin was originally a dialect spoken in the lower Tiber area (then known as Latium) around present-day Rome, but through the power of the ...
word , meaning '
citizen'.
In April 2020, the volunteer computing platform was restarted by the Ibercivis Foundation and the
Spanish National Research Council
The Spanish National Research Council ( es, Consejo Superior de Investigaciones Científicas, CSIC) is the largest public institution dedicated to research in Spain and the third largest in Europe. Its main objective is to develop and promote res ...
in order to screen existing drugs for antiviral activity against
Severe acute respiratory syndrome coronavirus 2, the causative agent of the
COVID-19 pandemic
The COVID-19 pandemic, also known as the coronavirus pandemic, is an ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The novel virus was first identi ...
.
History
Ibercivis was developed in Spain with the cooperation of the Institute of Biocomputation and Physics of Complex Systems at the
University of Zaragoza
The University of Zaragoza, sometimes referred to as Saragossa University () is a public university with teaching campuses and research centres spread over the three provinces of Aragon, Spain. Founded in 1542, it is one of the oldest universiti ...
,
CIEMAT, CETA-CIEMAT, the
Spanish National Research Council
The Spanish National Research Council ( es, Consejo Superior de Investigaciones Científicas, CSIC) is the largest public institution dedicated to research in Spain and the third largest in Europe. Its main objective is to develop and promote res ...
(CSIC) and RedIris. The project tasks are issued by different scientific and technological centers in Spain with the aim of creating a functional platform for volunteer-based scientific computing. The project is a
Europe
Europe is a large peninsula conventionally considered a continent in its own right because of its great physical size and the weight of its history and traditions. Europe is also considered a subcontinent of Eurasia and it is located entirel ...
an counterpart to the successful United States-based
SETI@home and
Berkeley Open Infrastructure for Network Computing
The Berkeley Open Infrastructure for Network Computing (BOINC, pronounced – rhymes with "oink") is an open-source middleware system for volunteer computing (a type of distributed computing). Developed originally to support SETI@home, it beca ...
(BOINC) volunteer computing projects.
Ibercivis' predecessor, the University of Zaragoza-based volunteer computing project Zivis, began operation in 2007, and Ibercivis itself started operating in June 2008. The Zivis project was a local volunteer computing application funded by the ''
ayuntamiento
''Ayuntamiento'' ()In other languages of Spain:
* ca, ajuntament ().
* gl, concello ().
* eu, udaletxea (). is the general term for the town council, or ''cabildo'', of a municipality or, sometimes, as is often the case in Spain and Latin Amer ...
'' (city council) of the city of
Zaragoza
Zaragoza, also known in English as Saragossa,''Encyclopædia Britannica'"Zaragoza (conventional Saragossa)" is the capital city of the Zaragoza Province and of the autonomous community of Aragon, Spain. It lies by the Ebro river and its tributari ...
. The larger-scale Ibercivis infrastructure has been used for a variety of calculating applications, including
nuclear fusion
Nuclear fusion is a reaction in which two or more atomic nuclei are combined to form one or more different atomic nuclei and subatomic particles ( neutrons or protons). The difference in mass between the reactants and products is manife ...
research,
protein folding
Protein folding is the physical process by which a protein chain is translated to its native three-dimensional structure, typically a "folded" conformation by which the protein becomes biologically functional. Via an expeditious and reproduc ...
and
materials
Material is a substance or mixture of substances that constitutes an object. Materials can be pure or impure, living or non-living matter. Materials can be classified on the basis of their physical and chemical properties, or on their geolog ...
simulations. In July 2009, the Ibercivis platform was extended to Portugal following an agreement signed by the governments of both countries during the Luso-Spanish Summit held in
Zamora, Spain
Zamora () is a city and municipality of Spain located in the autonomous community of Castile and León. It is the capital of the province of Zamora. The city straddles the Duero river. With its 24 characteristic Romanesque style churches of the ...
, in January 2009. Several Portuguese institutions subsequently affiliated themselves with Ibercivis, including the
Ministry of Science, the
Centre for Neuroscience and Cell Biology at the
University of Coimbra
The University of Coimbra (UC; pt, Universidade de Coimbra, ) is a public research university in Coimbra, Portugal. First established in Lisbon in 1290, it went through a number of relocations until moving permanently to Coimbra in 1537. The u ...
, and the
LIP
The lips are the visible body part at the mouth of many animals, including humans. Lips are soft, movable, and serve as the opening for food intake and in the articulation of sound and speech. Human lips are a tactile sensory organ, and can be ...
experimental
high-energy physics
Particle physics or high energy physics is the study of fundamental particles and forces that constitute matter and radiation. The fundamental particles in the universe are classified in the Standard Model as fermions (matter particles) a ...
laboratory.
In April 2020, a new Ibercivis project was launched to support researchers efforts to fight
Coronavirus disease 2019.
Number of participants
At its inception in June 2008, Ibercivis had 3,000 registered users hosting its various projects. By December 2012, this figure had risen to over 19,800, distributed across 124 countries.
There were around 55,000 individual hosting devices registered with the project, of which over 3,600 were active on a weekly basis.
As of April 2020, there were 917 active users and 2375 active hosts in the new inception of Ibercivis.
Projects
Ibercivis was intended to run indefinitely, and is designed to run several simultaneous applications belonging to different scientific disciplines in a manner similar to
World Community Grid. Users can select which projects they wish to contribute to via the project's website. As of May 2020, Ibercivis encompassed eight different active projects:
Active Projects
COVID-Phym: Screen existing drugs for antiviral activity against
Severe acute respiratory syndrome coronavirus 2, the causative agent of the
COVID-19 pandemic
The COVID-19 pandemic, also known as the coronavirus pandemic, is an ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The novel virus was first identi ...
.
Completed projects
Ibercivis projects that have been completed or discontinued as of May 2020 include:
* Fusion: a star on your screen: this application helped scientists at the Research Center for Energy Environment and Technology (CIEMAT) and at the Institute for Biocomputation and Physics of Complex Systems (BIFI) perform simulations of the
plasmas that will be produced in the
International Thermonuclear Experimental Reactor (ITER). The ITER project, which will begin operation in 2018, seeks to make
nuclear fusion power a reality, replicating on Earth conditions typically found inside
stars
A star is an astronomical object comprising a luminous spheroid of plasma held together by its gravity. The nearest star to Earth is the Sun. Many other stars are visible to the naked eye at night, but their immense distances from Earth ma ...
.
* Docking: looking for anti-cancer drugs: the Docking application assisted the search for new
medicines
A medication (also called medicament, medicine, pharmaceutical drug, medicinal drug or simply drug) is a drug used to diagnose, cure, treat, or prevent disease. Drug therapy ( pharmacotherapy) is an important part of the medical field and re ...
through the simulation of
protein docking. The Bioinformatics Unit of the Centro de Biología Molecular Severo Ochoa (
CSIC-UAM) developed a platform to allow the automatic simulation of interactions of proteins and small molecules. Its purpose was to find effective drugs to treat serious illnesses, such as
cancer
Cancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. These contrast with benign tumors, which do not spread. Possible signs and symptoms include a lump, abnormal b ...
.
* Materials: simulation of magnetic systems: the Materials application aided physicists from the
Universidad Complutense de Madrid
The Complutense University of Madrid ( es, Universidad Complutense de Madrid; UCM, links=no, ''Universidad de Madrid'', ''Universidad Central de Madrid''; la, Universitas Complutensis Matritensis, links=no) is a public research university lo ...
, Universidad de Extremadura and the Institute for Biocomputation and Physics of Complex Systems in discovering how non-magnetic impurities in
magnetic materials modify the properties of their transition from a magnetic state to a non-magnetic one. The knowledge of these transitions is important not only from a theoretical point of view but also may help develop many fields of
technology
Technology is the application of knowledge to reach practical goals in a specifiable and Reproducibility, reproducible way. The word ''technology'' may also mean the product of such an endeavor. The use of technology is widely prevalent in me ...
, such as magnetic
hard disks
A hard disk drive (HDD), hard disk, hard drive, or fixed disk is an electro-mechanical data storage device that stores and retrieves digital data using magnetic storage with one or more rigid rapidly rotating platters coated with magneti ...
and
superconducting
Superconductivity is a set of physical properties observed in certain materials where electrical resistance vanishes and magnetic flux fields are expelled from the material. Any material exhibiting these properties is a superconductor. Unlike ...
materials.
* Nanoluz: light at a nanoscale: knowing how
light
Light or visible light is electromagnetic radiation that can be perceived by the human eye. Visible light is usually defined as having wavelengths in the range of 400–700 nanometres (nm), corresponding to frequencies of 750–420 te ...
reacts at a
nanometer scale is a scientific challenge with important implications for the construction of new materials, development of new computing and communication systems and the improvement of technologies such as
solar panels. Using the Nanoluz application, scientists at the Institute of Optics Daza Valdés CSIC investigated the behavior of light in metal
nanoparticles, seeking to develop systems that could simplify medical and biological analysis.
* IberNet: let's research inside Ibercivis: with this project, researchers sought to study and represent the structure of Ibercivis as a
social network
A social network is a social structure made up of a set of social actors (such as individuals or organizations), sets of dyadic ties, and other social interactions between actors. The social network perspective provides a set of methods for ...
and try to export their conclusions to other social networks, to help with the study and prediction of the dynamics of a mass social environment.
*Amiloide: searching for drugs against neurodegenerative amyloid diseases: the AMILOIDE project aims to search digital libraries of millions of compounds for potential drugs to interfere with the formation of aggregates and
amyloid
Amyloids are aggregates of proteins characterised by a fibrillar morphology of 7–13 nm in diameter, a beta sheet (β-sheet) secondary structure (known as cross-β) and ability to be stained by particular dyes, such as Congo red. In the huma ...
fibers, which can lead to
neurodegenerative
A neurodegenerative disease is caused by the progressive loss of structure or function of neurons, in the process known as neurodegeneration. Such neuronal damage may ultimately involve cell death. Neurodegenerative diseases include amyotrophic ...
diseases. Currently, the main target diseases being studied are
familial amyloid polyneuropathy
Familial amyloid polyneuropathy, also called transthyretin-related hereditary amyloidosis, transthyretin amyloidosis abbreviated also as ATTR (hereditary form), or Corino de Andrade's disease, is an autosomal dominant neurodegenerative disease. It ...
(FAP) and
Alzheimer's disease. This project is the responsibility of scientists of the Structural and Computational Biology Group at the
Center for Neuroscience and Cell Biology (CNC) of the
University of Coimbra
The University of Coimbra (UC; pt, Universidade de Coimbra, ) is a public research university in Coimbra, Portugal. First established in Lisbon in 1290, it went through a number of relocations until moving permanently to Coimbra in 1537. The u ...
.
*Neurosim: an immersion in the molecular structure of memory: scientists at the Institute of Matter Structure, CSIC use the results of the Neurosim application to analyze the structural properties of
amino acids and small
peptides (sequences of a few tens of amino acids) that act in the human
brain
A brain is an organ that serves as the center of the nervous system in all vertebrate and most invertebrate animals. It is located in the head, usually close to the sensory organs for senses such as vision. It is the most complex organ in a ve ...
and
nervous system
In biology, the nervous system is the highly complex part of an animal that coordinates its actions and sensory information by transmitting signals to and from different parts of its body. The nervous system detects environmental changes ...
. By simulating the so-called energy landscape for each amino acid, key steps can be made in reconstructing the three-dimensional structure of proteins from the amino acid sequence, advancing the study of the structure and function of the human brain.
*Adsorption: behaviour of confined fluids in limited spaces: the Adsorption application helps researchers from the Instituto de Química-Física Rocasolano from CSIC study the
adsorption
Adsorption is the adhesion of atoms, ions or molecules from a gas, liquid or dissolved solid to a surface. This process creates a film of the ''adsorbate'' on the surface of the ''adsorbent''. This process differs from absorption, in which ...
properties of the
pillared clays that are widely used as industrial
catalysers, materials for gas storage, and industrial separation agents. This kind of clay is used in industrial processes such as the production of
biofuels from
vegetable oil
Vegetable oils, or vegetable fats, are oils extracted from seeds or from other parts of fruits. Like animal fats, vegetable fats are ''mixtures'' of triglycerides. Soybean oil, grape seed oil, and cocoa butter are examples of seed oils, or f ...
s, the storage of
natural gas
Natural gas (also called fossil gas or simply gas) is a naturally occurring mixture of gaseous hydrocarbons consisting primarily of methane in addition to various smaller amounts of other higher alkanes. Low levels of trace gases like carbo ...
at room temperature and the storage of
greenhouse gases produced by industry.
*Cuanticables: quantic wires simulations: scientists of the
University of Buenos Aires
The University of Buenos Aires ( es, Universidad de Buenos Aires, UBA) is a public research university in Buenos Aires, Argentina. Established in 1821, it is the premier institution of higher learning in the country and one of the most prestigi ...
use this application to study the degree to which the faults in the material of
quantum wire In mesoscopic physics, a quantum wire is an electrically conducting wire in which quantum effects influence the transport properties. Usually such effects appear in the dimension of nanometers, so they are also referred to as nanowires.
Quantum e ...
s has on their
electric current. For this purpose, they develop a theoretical model which simulates the quantum wire, the impurities and the
electrode
An electrode is an electrical conductor used to make contact with a nonmetallic part of a circuit (e.g. a semiconductor, an electrolyte, a vacuum or air). Electrodes are essential parts of batteries that can consist of a variety of materials d ...
s to which the quantum wire connects, and study the behaviour of the current that is generated across the wire when an external voltage is applied to it.
*Sanidad: improved diagnostics:
ionizing radiation is used in health applications ranging from basic
diagnostic
Diagnosis is the identification of the nature and cause of a certain phenomenon. Diagnosis is used in many different disciplines, with variations in the use of logic, analytics, and experience, to determine " cause and effect". In systems engin ...
tests in a modern hospital (in
radiology
Radiology ( ) is the medical discipline that uses medical imaging to diagnose diseases and guide their treatment, within the bodies of humans and other animals. It began with radiography (which is why its name has a root referring to radiat ...
,
nuclear medicine
Nuclear medicine or nucleology is a medical specialty involving the application of radioactive substances in the diagnosis and treatment of disease. Nuclear imaging, in a sense, is " radiology done inside out" because it records radiation emi ...
and laboratory tests) to the treatment of cancer by
radiotherapy. For these purposes, both actual
radioactive material
A radionuclide (radioactive nuclide, radioisotope or radioactive isotope) is a nuclide that has excess nuclear energy, making it unstable. This excess energy can be used in one of three ways: emitted from the nucleus as gamma radiation; transfe ...
s (in the form of seeds or injectable material) and complex equipment that generates
photon
A photon () is an elementary particle that is a quantum of the electromagnetic field, including electromagnetic radiation such as light and radio waves, and the force carrier for the electromagnetic force. Photons are massless, so they a ...
beams and
electron
The electron ( or ) is a subatomic particle with a negative one elementary electric charge. Electrons belong to the first generation of the lepton particle family,
and are generally thought to be elementary particles because they have no ...
s can be utilised. Physicists from Andalucía use the Sanidad simulations to improve knowledge of the safe use of radiation in healthcare, and to explore potential new applications.
*Criticalidad: electron transport in disordered systems with fractal properties: the Criticalidad project helps
Mexican investigators understand the properties and effects of
fractality in the transport of
electron
The electron ( or ) is a subatomic particle with a negative one elementary electric charge. Electrons belong to the first generation of the lepton particle family,
and are generally thought to be elementary particles because they have no ...
s through
disordered systems in the
Anderson transition.
*Soluvel: researching solubility of toxic and pharmaceutical compounds: the aim of the Soluvel project is to calculate the
solvation
Solvation (or dissolution) describes the interaction of a solvent with dissolved molecules. Both ionized and uncharged molecules interact strongly with a solvent, and the strength and nature of this interaction influence many properties of the ...
energies of certain soluble compounds, so as to identify through computation which compounds may prove toxic to humans, and which may serve as effective medical drugs. The project is being conducted by researchers from the Laboratory of Molecular Simulation of Separation and Reaction Engineering (LSRE), a division of the Faculty of Engineering of the
University of Porto.
*Primalidad: search for Wilson primes: a "citizen science" project open to all mathematicians, the Primalidad application searches for the next
Wilson prime – the first three having been 5, 13 and 563. It is conjectured that the fourth Wilson prime must be larger than 5 × 10
8.
Ibercivis.pt - Primalidad
. Retrieved 2011-10-15.
See also
* Crowdsourcing
* List of volunteer computing projects
* Science and technology in Portugal
* Supercomputing in Europe
References
External links
*
Official Portuguese website
Official Spanish website
Ibercivis - BOINC Spanish website
Ibercivis - BOINC Portuguese website
BIFI - Institute of Complex Systems Biocomputing and Physics
Centre for Neuroscience and Cell Biology
University of Zaragoza
CIEMAT - Centro de Investigationes Energeticas, Medioambientales y Tecnologicas
ITER - International Thermonuclear Experimental Reactor
{{DEFAULTSORT:Ibercivis
Science in society
Free science software
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