Hansenula Polymorpha
   HOME

TheInfoList



OR:

''Ogataea polymorpha'' is a
methylotrophic Methylotrophs are a diverse group of microorganisms that can use reduced one-carbon compounds, such as methanol or methane, as the carbon source for their growth; and multi-carbon compounds that contain no carbon-carbon bonds, such as dimethyl et ...
yeast Yeasts are eukaryotic, single-celled microorganisms classified as members of the fungus kingdom. The first yeast originated hundreds of millions of years ago, and at least 1,500 species are currently recognized. They are estimated to constitut ...
with unusual characteristics. It is used as a protein factory for
pharmaceuticals A medication (also called medicament, medicine, pharmaceutical drug, medicinal drug or simply drug) is a drug used to diagnose, cure, treat, or prevent disease. Drug therapy (pharmacotherapy) is an important part of the medical field and rel ...
. ''Ogataea polymorpha'' belongs to a limited number of methylotrophic yeast species – yeasts that can grow on
methanol Methanol (also called methyl alcohol and wood spirit, amongst other names) is an organic chemical and the simplest aliphatic alcohol, with the formula C H3 O H (a methyl group linked to a hydroxyl group, often abbreviated as MeOH). It is a ...
. The range of methylotrophic yeasts includes ''
Candida boidinii A yeast expression platform is a strain of yeast used to produce large amounts of proteins, sugars or other compounds for research or industrial uses. While yeast are often more resource-intensive to maintain than bacteria, certain products can ...
'', ''
Pichia methanolica ''Ogataea methanolica'' is a homothallic haploid organism that offers many of the advantages of a eukaryotic expression system such as protein processing and protein folding, while being as easy to manipulate as ''E. coli'' or ''Saccharomyces cer ...
'', ''
Pichia pastoris ''Pichia pastoris'' is a species of methylotrophic yeast. It was found in the 1960s, with its feature of using methanol as a source of carbon and energy. After years of study, ''P. pastoris'' was widely used in biochemical research and biotech i ...
'' and ''Ogataea polymorpha''. ''O. polymorpha'' is taxonomically a species of the family
Saccharomycetaceae The Saccharomycetaceae are a family of yeasts in the order Saccharomycetales that reproduce by budding. Species in the family have a cosmopolitan distribution, and are present in a wide variety of habitats, especially those with a plentiful suppl ...
.


Strains

Three ''O. polymorpha'' strains, identified in the 1950s, are known. They have unclear relationships and are of independent origins. They are found in soil samples, the gut of insects or in spoiled concentrated orange juice. They exhibit different features and are used in basic research and to
recombinant protein Recombinant DNA (rDNA) molecules are DNA molecules formed by laboratory methods of genetic recombination (such as molecular cloning) that bring together genetic material from multiple sources, creating sequences that would not otherwise be fou ...
production: *strain CBS4732 (CCY38-22-2; ATCC34438, NRRL-Y-5445) *strain DL-1 (NRRL-Y-7560; ATCC26012) *strain NCYC495 (CBS1976; ATAA14754, NRLL-Y-1798) Strains CBS4732 and NCYY495 can be mated whereas strain DL-1 cannot be mated with the other two. Strains CBS4732 and DL-1 are employed for recombinant protein production, strain NCYC495 is mainly used for the study of nitrate assimilation. The entire
genome In the fields of molecular biology and genetics, a genome is all the genetic information of an organism. It consists of nucleotide sequences of DNA (or RNA in RNA viruses). The nuclear genome includes protein-coding genes and non-coding ge ...
of strain CBS4732 has completely been sequenced. ''Ogataea polymorpha'' is a thermo-tolerant microorganism with some strains growing at temperatures above . The organism is able to assimilate
nitrate Nitrate is a polyatomic ion A polyatomic ion, also known as a molecular ion, is a covalent bonded set of two or more atoms, or of a metal complex, that can be considered to behave as a single unit and that has a net charge that is not zer ...
and can grow on a range of carbon sources in addition to
methanol Methanol (also called methyl alcohol and wood spirit, amongst other names) is an organic chemical and the simplest aliphatic alcohol, with the formula C H3 O H (a methyl group linked to a hydroxyl group, often abbreviated as MeOH). It is a ...
. Cells grown under conditions of elevated temperature accumulate a sugar named
trehalose Trehalose (from Turkish '' tıgala'' – a sugar derived from insect cocoons + -ose) is a sugar consisting of two molecules of glucose. It is also known as mycose or tremalose. Some bacteria, fungi, plants and invertebrate animals synthesize it ...
(this sugar is usually found in insects) as thermo-protective compound. It was shown that trehalose synthesis is not required for growth under these conditions, but for acquisition of thermotolerance. The synthetic steps for trehalose synthesis have been detailed for ''O. polymorpha'', and ''TPS1'', the key enzyme gene of this pathway, has been isolated and characterized. All methylotrophic yeasts share an identical methanol utilization pathway (Fig. 1). Growth on methanol is accompanied by a massive proliferation of cell
organelle In cell biology, an organelle is a specialized subunit, usually within a cell, that has a specific function. The name ''organelle'' comes from the idea that these structures are parts of cells, as organs are to the body, hence ''organelle,'' the ...
s named peroxisomes in which the initial enzymatic steps of this pathway take place. ''O. polymorpha'' is model organism to study all aspects of peroxisomal functions and the underlying molecular biology. During growth on methanol key
enzymes Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecule ...
of the methanol metabolism are present in high amounts. An especially high abundance can be observed for enzymes called MOX (methanol oxidase), FMDH (
formate dehydrogenase Formate dehydrogenases are a set of enzymes that catalyse the oxidation of formate to carbon dioxide, donating the electrons to a second substrate, such as NAD+ in formate:NAD+ oxidoreductase () or to a cytochrome in formate:ferricytochrome-b1 o ...
), and DHAS (dihydroxyacetone synthase). Their presence is regulated at the
transcriptional Transcription is the process of copying a segment of DNA into RNA. The segments of DNA transcribed into RNA molecules that can encode proteins are said to produce messenger RNA (mRNA). Other segments of DNA are copied into RNA molecules calle ...
level of the respective genes. In the related species ''C. boidinii'', ''P. methanolica'', and ''P. pastoris'' this
gene expression Gene expression is the process by which information from a gene is used in the synthesis of a functional gene product that enables it to produce end products, protein or non-coding RNA, and ultimately affect a phenotype, as the final effect. The ...
strictly depends on the presence of methanol or methanol derivatives, whereas in ''O. polymorpha'' strong expression is elicited by appropriate levels of glycerol or under conditions of glucose starvation. ''O. polymorpha'' produces
glycoprotein Glycoproteins are proteins which contain oligosaccharide chains covalently attached to amino acid side-chains. The carbohydrate is attached to the protein in a cotranslational or posttranslational modification. This process is known as glycos ...
s with two types of sugar chains, N- and O-linked glycans are attached to protein. Studies on the structure of N-linked chains have revealed a certain average length (Man8-12GlcNAc2) with terminal alpha-1,2-linked mannose residues, and not with allergenic terminal alpha-1,3-linked mannose residues as found in other yeasts, especially in the baker’s yeast ''
Saccharomyces cerevisiae ''Saccharomyces cerevisiae'' () (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungus microorganisms). The species has been instrumental in winemaking, baking, and brewing since ancient times. It is believed to have been o ...
''.


Biotechnological applications

''Ogataea polymorpha'' with its unusual characteristics provides an excellent platform for the gene technological production of proteins, especially of pharmaceuticals like
insulin Insulin (, from Latin ''insula'', 'island') is a peptide hormone produced by beta cells of the pancreatic islets encoded in humans by the ''INS'' gene. It is considered to be the main anabolic hormone of the body. It regulates the metabolism o ...
for treatment of
diabetes Diabetes, also known as diabetes mellitus, is a group of metabolic disorders characterized by a high blood sugar level ( hyperglycemia) over a prolonged period of time. Symptoms often include frequent urination, increased thirst and increased ap ...
,
hepatitis B Hepatitis B is an infectious disease caused by the ''Hepatitis B virus'' (HBV) that affects the liver; it is a type of viral hepatitis. It can cause both acute and chronic infection. Many people have no symptoms during an initial infection. Fo ...
vaccines A vaccine is a biological preparation that provides active acquired immunity The adaptive immune system, also known as the acquired immune system, is a subsystem of the immune system that is composed of specialized, systemic cells and pro ...
or IFNalpha-2a for the treatment of
hepatitis C Hepatitis C is an infectious disease caused by the hepatitis C virus (HCV) that primarily affects the liver; it is a type of viral hepatitis. During the initial infection people often have mild or no symptoms. Occasionally a fever, dark urine, a ...
. Derivatives of both CBS4732 and DL-1 are employed in the production of such recombinant compounds. Further yeasts employed for this application are ''Pichia pastoris'', ''
Arxula adeninivorans ''Arxula adeninivorans'' (''Blastobotrys adeninivorans'') is a dimorphic yeast with unusual characteristics. The first description of ''A. adeninivorans'' was provided in the mid-eighties. The species was initially designated as ''Trichosporon a ...
'' and ''Saccharomyces cerevisiae'' and others. Like other yeasts, ''O. polymorpha'' is a microorganism that can be cultured in large fermenters to high cell densities within a short time. It is a safe organism in not containing
pyrogens Fever, also referred to as pyrexia, is defined as having a temperature above the normal range due to an increase in the body's temperature set point. There is not a single agreed-upon upper limit for normal temperature with sources using val ...
, pathogens or viral inclusions. It can release compounds into a culture medium as it has all the components required for secretion (this is for instance not the case with bacteria like ''
Escherichia coli ''Escherichia coli'' (),Wells, J. C. (2000) Longman Pronunciation Dictionary. Harlow ngland Pearson Education Ltd. also known as ''E. coli'' (), is a Gram-negative, facultative anaerobic, rod-shaped, coliform bacterium of the genus ''Escher ...
''). It can provide attractive genetic components for an efficient production of proteins. In Fig. 2 the general design of a vector (a genetic vehicle to transform a yeast strain into a genetically engineered protein producer). It must contain several genetic elements: 1. A selection marker, required to select a transformed strain from an untransformed background –this can be done if for instance such an element enables a deficient strain to grow under culturing conditions void of a certain compound like a particular amino acid that cannot be produced by the deficient strain). 2. Certain elements to propagate and to target the foreign DNA to the chromosome of the yeast (ARS and/or rDNA sequence). 3. A segment responsible for the production of the desired protein compound a so-called expression cassette. Such a cassette is made up by a sequence of regulatory elements, a promoter that controls, how much and under which circumstances a following gene sequence is transcribed and as a consequence how much protein is eventually made. This means that the segment following the promoter is variable depending on the desired product – it could be a sequence determining the amino acids for insulin, for hepatitis B vaccine or for interferon. The expression cassette is terminated by a following terminator sequence that provides a proper stop of the transcription. The promoter elements of the ''O. polymorpha'' system are derived from genes that are highly expressed, from instance from the MOX gene, the ''FMD'' gene or the ''TPS1'' gene mentioned before. They are not only very strong, but can also be regulated by certain addition of carbon sources like sugar, methanol or glycerol. In 2000 an informal society of scientists was founded named HPWN (''Hansenula polymorpha'' worldwide network) founded by Marten Veenhuis, Groningen, and Gerd Gellissen, Düsseldorf. Every two years meetings are held. The attractiveness of the ''O. polymorpha'' platform is commercially exploited by several biotech companies for the development of production processes, among others by PharmedArtis, located in Aachen, Germany and the Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK).


References


Bibliography

* * * *


External links

*http://www.pharmedartis.de *http://www.ipk-gatersleben.de/Internet/Forschung/MolekulareZellbiologie/ {{Taxonbar, from=Q288715 Yeasts Fungi described in 1959 Saccharomycetaceae