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Phytoremediation technologies use living
plants Plants are predominantly Photosynthesis, photosynthetic eukaryotes of the Kingdom (biology), kingdom Plantae. Historically, the plant kingdom encompassed all living things that were not animals, and included algae and fungi; however, all curr ...
to clean up soil, air and water contaminated with hazardous contaminants. It is defined as "the use of green plants and the associated microorganisms, along with proper soil amendments and agronomic techniques to either contain, remove or render toxic environmental contaminants harmless". The term is an amalgam of the Greek ''phyto'' (plant) and Latin ''remedium'' (restoring balance). Although attractive for its cost, phytoremediation has not been demonstrated to redress any significant environmental challenge to the extent that contaminated space has been reclaimed. Phytoremediation is proposed as a cost-effective plant-based approach of
environmental remediation Environmental remediation deals with the removal of pollution or contaminants from environmental media such as soil, groundwater, sediment, or surface water. Remedial action is generally subject to an array of regulatory requirements, and may al ...
that takes advantage of the ability of plants to concentrate elements and compounds from the environment and to detoxify various compounds. The concentrating effect results from the ability of certain plants called
hyperaccumulator A hyperaccumulator is a plant capable of growing in soil or water with very high concentrations of metals, absorbing these metals through their roots, and concentrating extremely high levels of metals in their tissues. The metals are concentrated a ...
s to bioaccumulate chemicals. The remediation effect is quite different. Toxic heavy metals cannot be degraded, but organic pollutants can be, and are generally the major targets for phytoremediation. Several field trials confirmed the feasibility of using plants for
environmental cleanup Environmental remediation deals with the removal of pollution or contaminants from environmental media such as soil, groundwater, sediment, or surface water. Remedial action is generally subject to an array of regulatory requirements, and may also ...
.


Background

Other methods of soil remediation are very expensive because they require a much more complicated process. The contaminated soil would need to be removed, sent to a laboratory to be cleansed on the toxic metals and then brought back to the site from which it was extracted. Phytoremediation is a more cost effective solution. Phytoremediation may be applied to polluted
soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former te ...
or static water environment. This technology has been increasingly investigated and employed at sites with soils contaminated heavy metals like with
cadmium Cadmium is a chemical element with the symbol Cd and atomic number 48. This soft, silvery-white metal is chemically similar to the two other stable metals in group 12, zinc and mercury. Like zinc, it demonstrates oxidation state +2 in most of ...
,
lead Lead is a chemical element with the symbol Pb (from the Latin ) and atomic number 82. It is a heavy metal that is denser than most common materials. Lead is soft and malleable, and also has a relatively low melting point. When freshly cu ...
,
aluminum Aluminium (aluminum in American and Canadian English) is a chemical element with the symbol Al and atomic number 13. Aluminium has a density lower than those of other common metals, at approximately one third that of steel. It has ...
,
arsenic Arsenic is a chemical element with the symbol As and atomic number 33. Arsenic occurs in many minerals, usually in combination with sulfur and metals, but also as a pure elemental crystal. Arsenic is a metalloid. It has various allotropes, but ...
and
antimony Antimony is a chemical element with the symbol Sb (from la, stibium) and atomic number 51. A lustrous gray metalloid, it is found in nature mainly as the sulfide mineral stibnite (Sb2S3). Antimony compounds have been known since ancient time ...
. These metals can cause
oxidative stress Oxidative stress reflects an imbalance between the systemic manifestation of reactive oxygen species and a biological system's ability to readily Detoxification, detoxify the reactive intermediates or to repair the resulting damage. Disturbances ...
in plants, destroy
cell membrane The cell membrane (also known as the plasma membrane (PM) or cytoplasmic membrane, and historically referred to as the plasmalemma) is a biological membrane that separates and protects the interior of all cells from the outside environment ( ...
integrity, interfere with
nutrient A nutrient is a substance used by an organism to survive, grow, and reproduce. The requirement for dietary nutrient intake applies to animals, plants, fungi, and protists. Nutrients can be incorporated into cells for metabolic purposes or excret ...
uptake, inhibit
photosynthesis Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that, through cellular respiration, can later be released to fuel the organism's activities. Some of this chemical energy is stored i ...
and decrease plant
chlorophyll Chlorophyll (also chlorophyl) is any of several related green pigments found in cyanobacteria and in the chloroplasts of algae and plants. Its name is derived from the Greek words , ("pale green") and , ("leaf"). Chlorophyll allow plants to a ...
. Phytoremediation has been used successfully include the restoration of abandoned metal mine workings, and sites where
polychlorinated biphenyl Polychlorinated biphenyls (PCBs) are highly carcinogenic chemical compounds, formerly used in industrial and consumer products, whose production was banned in the United States by the Toxic Substances Control Act in 1979 and internationally by t ...
s have been dumped during manufacture and mitigation of ongoing coal mine discharges reducing the impact of contaminants in soils, water, or air. Contaminants such as metals, pesticides, solvents, explosives,Phytoremediation of soils using Ralstonia eutropha, Pseudomonas tolaasi, Burkholderia fungorum reported by Sofie Thijs
and crude oil and its derivatives, have been mitigated in phytoremediation projects worldwide. Many plants such as
mustard plant The mustard plant is any one of several plant species in the genera ''Brassica'' and ''Sinapis'' in the family Brassicaceae (the mustard family). Mustard seed is used as a spice. Grinding and mixing the seeds with water, vinegar, or other liqui ...
s, alpine pennycress,
hemp Hemp, or industrial hemp, is a botanical class of ''Cannabis sativa'' cultivars grown specifically for industrial or medicinal use. It can be used to make a wide range of products. Along with bamboo, hemp is among the fastest growing plants o ...
, and
pigweed Pigweed can mean any of a number of weedy plants which may be used as pig fodder: * ''Amaranthus'' species ** '' Amaranthus albus'', white pigweed, tumble pigweed ** ''Amaranthus blitoides'', prostrate pigweed ** ''Amaranthus californicus'', Calif ...
have proven to be successful at hyperaccumulating contaminants at
toxic waste Toxic waste is any unwanted material in all forms that can cause harm (e.g. by being inhaled, swallowed, or absorbed through the skin). Mostly generated by industry, consumer products like televisions, computers, and phones contain toxic chemi ...
sites. Not all plants are able to accumulate heavy metals or organics pollutants due to differences in the physiology of the plant. Even cultivars within the same species have varying abilities to accumulate pollutants.


Advantages and limitations

*Advantages: ** the cost of the phytoremediation is lower than that of traditional processes both ''in situ'' and ''ex situ'' ** the possibility of the recovery and re-use of valuable metals (by companies specializing in "phyto mining") ** it preserves the
topsoil Topsoil is the upper layer of soil. It has the highest concentration of organic matter and microorganisms and is where most of the Earth's biological soil activity occurs. Description Topsoil is composed of mineral particles and organic matt ...
, maintaining the fertility of the soil ** Increase
soil health Soil health is a state of a soil meeting its range of ecosystem functions as appropriate to its environment. In more colloquial terms, the health of soil arises from favorable interactions of all soil components (living and non-living) that belong ...
, yield, and plant phytochemicals ** the use of plants also reduces erosion and metal leaching in the soil *Limitations: ** phytoremediation is limited to the surface area and depth occupied by the roots. ** with plant-based systems of remediation, it is not possible to completely prevent the leaching of contaminants into the
groundwater Groundwater is the water present beneath Earth's surface in rock and soil pore spaces and in the fractures of rock formations. About 30 percent of all readily available freshwater in the world is groundwater. A unit of rock or an unconsolidate ...
(without the complete removal of the contaminated ground, which in itself does not resolve the problem of contamination) ** the survival of the plants is affected by the toxicity of the contaminated land and the general condition of the soil ** bio-accumulation of contaminants, especially metals, into the plants can effect consumer products like food and cosmetics, and requires the safe disposal of the affected plant material ** when taking up heavy metals, sometimes the metal is bound to the
soil organic matter Soil organic matter (SOM) is the organic matter component of soil, consisting of plant and animal detritus at various stages of decomposition, cells and tissues of soil microbes, and substances that soil microbes synthesize. SOM provides numerous b ...
, which makes it unavailable for the plant to extract


Processes

A range of processes mediated by plants or algae are tested in treating environmental problems:


Phytoextraction

Phytoextraction (or ''phytoaccumulation'' or ''phytosequestration'') exploits the ability of plants or algae to remove contaminants from soil or water into harvestable plant biomass. The roots take up substances from the soil or water and concentrate it above ground in the plant biomass Organisms that can uptake high amounts of contaminants are called
hyperaccumulators A hyperaccumulator is a plant capable of growing in soil or water with very high concentrations of metals, absorbing these metals through their roots, and concentrating extremely high levels of metals in their tissues. The metals are concentrated a ...
. Phytoextraction can also be performed by plants (e.g.
Populus ''Populus'' is a genus of 25–30 species of deciduous flowering plants in the family Salicaceae, native to most of the Northern Hemisphere. English names variously applied to different species include poplar (), aspen, and cottonwood. The we ...
and
Salix Willows, also called sallows and osiers, from the genus ''Salix'', comprise around 400 speciesMabberley, D.J. 1997. The Plant Book, Cambridge University Press #2: Cambridge. of typically deciduous trees and shrubs, found primarily on moist so ...
) that take up lower levels of pollutants, but due to their high growth rate and biomass production, may remove a considerable amount of contaminants from the soil. Phytoextraction has been growing rapidly in popularity worldwide for the last twenty years or so. Typically, phytoextraction is used for heavy metals or other inorganics. At the time of disposal, contaminants are typically concentrated in the much smaller volume of the plant matter than in the initially contaminated soil or sediment. After harvest, a lower level of the contaminant will remain in the soil, so the growth/harvest cycle must usually be repeated through several crops to achieve a significant cleanup. After the process, the soil is remediated. Of course many pollutants kill plants, so phytoremediation is not a panacea. For example, chromium is toxic to most higher plants at concentrations above 100 μM·kg−1 dry weight. Mining of these extracted metals through phytomining is a conceivable way of recovering the material. Hyperaccumulating plants are often
metallophyte A metallophyte is a plant that can tolerate high levels of heavy metals such as lead. Such plants range between "obligate metallophytes" (which can only survive in the presence of these metals), and "facultative metallophytes" which can tolerate su ...
. Induced or assisted phytoextraction is a process where a conditioning fluid containing a
chelator Chelation is a type of bonding of ions and molecules to metal ions. It involves the formation or presence of two or more separate coordinate bonds between a polydentate (multiple bonded) ligand and a single central metal atom. These ligands are ...
or another agent is added to soil to increase metal solubility or mobilization so that the plants can absorb them more easily. While such additives can increase metal uptake by plants, they can also lead to large amounts of available metals in the soil beyond what the plants are able to translocate, causing potential leaching into the subsoil or groundwater. Examples of plants that are known to accumulate the following contaminants: *
Arsenic Arsenic is a chemical element with the symbol As and atomic number 33. Arsenic occurs in many minerals, usually in combination with sulfur and metals, but also as a pure elemental crystal. Arsenic is a metalloid. It has various allotropes, but ...
, using the sunflower (''
Helianthus annuus The common sunflower (''Helianthus annuus'') is a large annual forb of the genus ''Helianthus'' grown as a crop for its edible oily seeds. Apart from cooking oil production, it is also used as livestock forage (as a meal or a silage plant), as b ...
''), or the Chinese Brake fern (''
Pteris vittata ''Pteris vittata'', commonly known variously as the Chinese brake, Chinese ladder brake, or simply ladder brake, is a fern species in the Pteridoideae subfamily of the Pteridaceae. It is indigenous to Asia, southern Europe, tropical Africa and Au ...
''). *
Cadmium Cadmium is a chemical element with the symbol Cd and atomic number 48. This soft, silvery-white metal is chemically similar to the two other stable metals in group 12, zinc and mercury. Like zinc, it demonstrates oxidation state +2 in most of ...
, using willow (''
Salix viminalis ''Salix viminalis'', the basket willow, common osier or osier, is a species of willow native to Europe, Western Asia, and the Himalayas.Meikle, R. D. (1984). ''Willows and Poplars of Great Britain and Ireland''. BSBI Handbook No. 4. .Rushforth, K ...
''): In 1999, one research experiment performed by Maria Greger and Tommy Landberg suggested willow has a significant potential as a phytoextractor of cadmium (Cd), zinc (Zn), and copper (Cu), as willow has some specific characteristics like high transport capacity of heavy metals from root to shoot and huge amount of biomass production; can be used also for production of bio energy in the biomass energy power plant.. *
Cadmium Cadmium is a chemical element with the symbol Cd and atomic number 48. This soft, silvery-white metal is chemically similar to the two other stable metals in group 12, zinc and mercury. Like zinc, it demonstrates oxidation state +2 in most of ...
and
zinc Zinc is a chemical element with the symbol Zn and atomic number 30. Zinc is a slightly brittle metal at room temperature and has a shiny-greyish appearance when oxidation is removed. It is the first element in group 12 (IIB) of the periodi ...
, using alpine pennycress (''
Thlaspi caerulescens ''Thlaspi caerulescens'', the Alpine Penny-cress or alpine pennygrass, is a flowering plant in the family Brassicaceae. It is found in Scandinavia and Europe. Description ''Thlaspi caerulescens'' is a low biennial or perennial plant that has sma ...
''), a hyperaccumulator of these metals at levels that would be
toxic Toxicity is the degree to which a chemical substance or a particular mixture of substances can damage an organism. Toxicity can refer to the effect on a whole organism, such as an animal, bacterium, or plant, as well as the effect on a subst ...
to many plants. Specifically, pennycress leaves accumulate up to 380 mg/kg Cd. On the other hand, the presence of copper seems to impair its growth (see table for reference). *
Chromium Chromium is a chemical element with the symbol Cr and atomic number 24. It is the first element in group 6. It is a steely-grey, lustrous, hard, and brittle transition metal. Chromium metal is valued for its high corrosion resistance and hardne ...
is toxic to most plants. However, tomatoes (''
Solanum lycopersicum The tomato is the edible berry of the plant ''Solanum lycopersicum'', commonly known as the tomato plant. The species originated in western South America, Mexico, and Central America. The Mexican Nahuatl word gave rise to the Spanish word ...
'') show some promise. *
Lead Lead is a chemical element with the symbol Pb (from the Latin ) and atomic number 82. It is a heavy metal that is denser than most common materials. Lead is soft and malleable, and also has a relatively low melting point. When freshly cu ...
, using Indian mustard (''
Brassica juncea ''Brassica juncea'', commonly brown mustard, Chinese mustard, Indian mustard, leaf mustard, Oriental mustard and vegetable mustard, is a species of mustard plant. Cultivar ''Brassica juncea'' cultivars can be divided into four major subgroup ...
''), ragweed (''
Ambrosia artemisiifolia ''Ambrosia artemisiifolia'', with the common names common ragweed, annual ragweed, and low ragweed, is a species of the genus '' Ambrosia'' native to regions of the Americas. Taxonomy The species name, ''artemisiifolia'', is given because the le ...
''), hemp dogbane (''
Apocynum cannabinum ''Apocynum cannabinum'' (dogbane, amy root, hemp dogbane, prairie dogbane, Indian hemp, rheumatism root, or wild cotton) is a perennial herbaceous plant that grows throughout much of North America—in the southern half of Canada and throughou ...
''), or
poplar trees ''Populus'' is a genus of 25–30 species of deciduous flowering plants in the family Salicaceae, native to most of the Northern Hemisphere. English names variously applied to different species include poplar (), aspen, and cottonwood. The we ...
, which sequester lead in their biomass. *Salt-tolerant (moderately
halophytic A halophyte is a salt-tolerant plant that grows in soil or waters of high salinity, coming into contact with saline water through its roots or by salt spray, such as in saline semi-deserts, mangrove swamps, marshes and sloughs and seashores. T ...
)
barley Barley (''Hordeum vulgare''), a member of the grass family, is a major cereal grain grown in temperate climates globally. It was one of the first cultivated grains, particularly in Eurasia as early as 10,000 years ago. Globally 70% of barley pr ...
and/or
sugar beets Sugar is the generic name for sweet-tasting, soluble carbohydrates, many of which are used in food. Simple sugars, also called monosaccharides, include glucose, fructose, and galactose. Compound sugars, also called disaccharides or double s ...
are commonly used for the extraction of
sodium chloride Sodium chloride , commonly known as salt (although sea salt also contains other chemical salts), is an ionic compound with the chemical formula NaCl, representing a 1:1 ratio of sodium and chloride ions. With molar masses of 22.99 and 35.45 g ...
(common salt) to reclaim fields that were previously flooded by
sea water Seawater, or salt water, is water from a sea or ocean. On average, seawater in the world's oceans has a salinity of about 3.5% (35 g/L, 35 ppt, 600 mM). This means that every kilogram (roughly one liter by volume) of seawater has approx ...
. *
Caesium-137 Caesium-137 (), cesium-137 (US), or radiocaesium, is a radioactive isotope of caesium that is formed as one of the more common fission products by the nuclear fission of uranium-235 and other fissionable isotopes in nuclear reactors and nucl ...
and
strontium-90 Strontium-90 () is a radioactive isotope of strontium produced by nuclear fission, with a half-life of 28.8 years. It undergoes β− decay into yttrium-90, with a decay energy of 0.546 MeV. Strontium-90 has applications in medicine and i ...
were removed from a pond using
sunflower The common sunflower (''Helianthus annuus'') is a large annual forb of the genus ''Helianthus'' grown as a crop for its edible oily seeds. Apart from cooking oil production, it is also used as livestock forage (as a meal or a silage plant), as ...
s after the
Chernobyl accident The Chernobyl disaster was a nuclear accident that occurred on 26 April 1986 at the No. 4 reactor in the Chernobyl Nuclear Power Plant, near the city of Pripyat in the north of the Ukrainian SSR in the Soviet Union. It is one of only two nu ...
. *
Mercury Mercury commonly refers to: * Mercury (planet), the nearest planet to the Sun * Mercury (element), a metallic chemical element with the symbol Hg * Mercury (mythology), a Roman god Mercury or The Mercury may also refer to: Companies * Merc ...
,
selenium Selenium is a chemical element with the symbol Se and atomic number 34. It is a nonmetal (more rarely considered a metalloid) with properties that are intermediate between the elements above and below in the periodic table, sulfur and tellurium, ...
and organic pollutants such as
polychlorinated biphenyl Polychlorinated biphenyls (PCBs) are highly carcinogenic chemical compounds, formerly used in industrial and consumer products, whose production was banned in the United States by the Toxic Substances Control Act in 1979 and internationally by t ...
s (PCBs) have been removed from soils by
transgenic plant Genetically modified plants have been engineered for scientific research, to create new colours in plants, deliver vaccines, and to create enhanced crops. Plant genomes can be engineered by physical methods or by use of ''Agrobacterium'' for the ...
s containing
gene In biology, the word gene (from , ; "...Wilhelm Johannsen coined the word gene to describe the Mendelian units of heredity..." meaning ''generation'' or ''birth'' or ''gender'') can have several different meanings. The Mendelian gene is a ba ...
s for bacterial enzymes.


Phytostabilization

Phytostabilization reduces the mobility of substances in the environment, for example, by limiting the
leaching Leaching is the loss or extraction of certain materials from a carrier into a liquid (usually, but not always a solvent). and may refer to: * Leaching (agriculture), the loss of water-soluble plant nutrients from the soil; or applying a small amou ...
of substances from the
soil Soil, also commonly referred to as earth or dirt, is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life. Some scientific definitions distinguish ''dirt'' from ''soil'' by restricting the former te ...
. It focuses on the long term stabilization and containment of the pollutant. The plant immobilizes the pollutants by binding them to soil particles making them less available for plant or human uptake. Unlike phytoextraction, phytostabilization focuses mainly on sequestering pollutants in soil near the roots but not in plant tissues. Pollutants become less bioavailable, resulting in reduced exposure. The plants can also excrete a substance that produces a chemical reaction, converting the heavy metal pollutant into a less toxic form. Stabilization results in reduced erosion, runoff, leaching, in addition to reducing the bioavailability of the contaminant. An example application of phytostabilization is using a vegetative cap to stabilize and contain
mine tailings In mining, tailings are the materials left over after the process of separating the valuable fraction from the uneconomic fraction (gangue) of an ore. Tailings are different to overburden, which is the waste rock or other material that overlie ...
. Some
soil amendment A soil conditioner is a product which is added to soil to improve the soil’s physical qualities, usually its fertility (ability to provide nutrition for plants) and sometimes its mechanics. In general usage, the term "soil conditioner" is often ...
s decrease radiosource mobility – while at some concentrations the same amendments will ''increase'' mobility. Vidal ''et al.'' 2000 find the
root mat A fibrous root system is the opposite of a taproot system. It is usually formed by thin, moderately branching roots growing from the Plant stem, stem. A fibrous root system is universal in monocotyledonous plants and ferns. The fibrous root syste ...
s of
meadow grass ''Poa'' is a genus of about 570 species of grasses, native to the temperate regions of both hemispheres. Common names include meadow-grass (mainly in Europe and Asia), bluegrass (mainly in North America), tussock (some New Zealand species), a ...
es are effective at demobilising radiosource materials especially with certain combinations of other agricultural practices. Vidal also find that the particular grass mix makes a significant difference.


Phytodegradation

Phytodegradation (also called phytotransformation) uses plants or microorganisms to degrade organic pollutants in the soil or within the body of the plant. The organic compounds are broken down by enzymes that the plant roots secrete and these molecules are then taken up by the plant and released through transpiration. This process works best with organic contaminants like herbicides,
trichloroethylene The chemical compound trichloroethylene is a halocarbon commonly used as an industrial solvent. It is a clear, colourless non-flammable liquid with a chloroform-like sweet smell. It should not be confused with the similar 1,1,1-trichloroethane, ...
, and methyl ''tert''-butyl ether. Phytotransformation results in the chemical modification of environmental substances as a direct result of plant
metabolism Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
, often resulting in their inactivation, degradation (phytodegradation), or immobilization (phytostabilization). In the case of
organic Organic may refer to: * Organic, of or relating to an organism, a living entity * Organic, of or relating to an anatomical organ Chemistry * Organic matter, matter that has come from a once-living organism, is capable of decay or is the product ...
pollutants, such as
pesticides Pesticides are substances that are meant to control pests. This includes herbicide, insecticide, nematicide, molluscicide, piscicide, avicide, rodenticide, bactericide, insect repellent, animal repellent, microbicide, fungicide, and lampric ...
,
explosives An explosive (or explosive material) is a reactive substance that contains a great amount of potential energy that can produce an explosion if released suddenly, usually accompanied by the production of light, heat, sound, and pressure. An expl ...
,
solvents A solvent (s) (from the Latin '' solvō'', "loosen, untie, solve") is a substance that dissolves a solute, resulting in a solution. A solvent is usually a liquid but can also be a solid, a gas, or a supercritical fluid. Water is a solvent for p ...
, industrial chemicals, and other
xenobiotic A xenobiotic is a chemical substance found within an organism that is not naturally produced or expected to be present within the organism. It can also cover substances that are present in much higher concentrations than are usual. Natural compo ...
substances, certain plants, such as Cannas, render these substances non-toxic by their
metabolism Metabolism (, from el, μεταβολή ''metabolē'', "change") is the set of life-sustaining chemical reactions in organisms. The three main functions of metabolism are: the conversion of the energy in food to energy available to run cell ...
. In other cases,
microorganism A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in olde ...
s living in association with plant roots may metabolize these substances in soil or water. These complex and recalcitrant compounds cannot be broken down to basic molecules (water, carbon-dioxide, etc.) by plant molecules, and, hence, the term ''phytotransformation'' represents a change in chemical structure without complete breakdown of the compound. The term "Green Liver" is used to describe phytotransformation, as plants behave analogously to the human
liver The liver is a major Organ (anatomy), organ only found in vertebrates which performs many essential biological functions such as detoxification of the organism, and the Protein biosynthesis, synthesis of proteins and biochemicals necessary for ...
when dealing with these
xenobiotic A xenobiotic is a chemical substance found within an organism that is not naturally produced or expected to be present within the organism. It can also cover substances that are present in much higher concentrations than are usual. Natural compo ...
compounds (foreign compound/pollutant). After uptake of the xenobiotics, plant enzymes increase the polarity of the xenobiotics by adding functional groups such as hydroxyl groups (-OH). This is known as Phase I metabolism, similar to the way that the human liver increases the polarity of drugs and foreign compounds (
drug metabolism Drug metabolism is the metabolic breakdown of drugs by living organisms, usually through specialized enzymatic systems. More generally, xenobiotic metabolism (from the Greek xenos "stranger" and biotic "related to living beings") is the set of ...
). Whereas in the human liver enzymes such as
cytochrome P450 Cytochromes P450 (CYPs) are a Protein superfamily, superfamily of enzymes containing heme as a cofactor (biochemistry), cofactor that functions as monooxygenases. In mammals, these proteins oxidize steroids, fatty acids, and xenobiotics, and are ...
s are responsible for the initial reactions, in plants enzymes such as peroxidases, phenoloxidases, esterases and nitroreductases carry out the same role. In the second stage of phytotransformation, known as Phase II metabolism, plant biomolecules such as glucose and amino acids are added to the polarized xenobiotic to further increase the polarity (known as conjugation). This is again similar to the processes occurring in the human liver where
glucuronidation Glucuronidation is often involved in drug metabolism of substances such as drugs, pollutants, bilirubin, androgens, estrogens, mineralocorticoids, glucocorticoids, fatty acid derivatives, retinoids, and bile acids. These linkages involve glycosid ...
(addition of glucose molecules by the UGT class of enzymes, e.g.
UGT1A1 UDP-glucuronosyltransferase 1-1 also known as UGT-1A is an enzyme that in humans is encoded by the ''UGT1A1'' gene. UGT-1A is a uridine diphosphate glucuronosyltransferase (UDP-glucuronosyltransferase, UDPGT), an enzyme of the glucuronidation path ...
) and
glutathione Glutathione (GSH, ) is an antioxidant in plants, animals, fungi, and some bacteria and archaea. Glutathione is capable of preventing damage to important cellular components caused by sources such as reactive oxygen species, free radicals, pero ...
addition reactions occur on reactive centres of the xenobiotic. Phase I and II reactions serve to increase the polarity and reduce the toxicity of the compounds, although many exceptions to the rule are seen. The increased polarity also allows for easy transport of the xenobiotic along aqueous channels. In the final stage of phytotransformation (Phase III metabolism), a sequestration of the xenobiotic occurs within the plant. The xenobiotics polymerize in a
lignin Lignin is a class of complex organic polymers that form key structural materials in the support tissues of most plants. Lignins are particularly important in the formation of cell walls, especially in wood and bark, because they lend rigidity ...
-like manner and develop a complex structure that is sequestered in the plant. This ensures that the xenobiotic is safely stored, and does not affect the functioning of the plant. However, preliminary studies have shown that these plants can be toxic to small animals (such as snails), and, hence, plants involved in phytotransformation may need to be maintained in a closed enclosure. Hence, the plants reduce toxicity (with exceptions) and sequester the xenobiotics in phytotransformation.
Trinitrotoluene Trinitrotoluene (), more commonly known as TNT, more specifically 2,4,6-trinitrotoluene, and by its preferred IUPAC name 2-methyl-1,3,5-trinitrobenzene, is a chemical compound with the formula C6H2(NO2)3CH3. TNT is occasionally used as a reage ...
phytotransformation has been extensively researched and a transformation pathway has been proposed..


Phytostimulation

Phytostimulation (or rhizodegradation) is the enhancement of soil microbial activity for the degradation of organic contaminants, typically by organisms that associate with
root In vascular plants, the roots are the organs of a plant that are modified to provide anchorage for the plant and take in water and nutrients into the plant body, which allows plants to grow taller and faster. They are most often below the sur ...
s. This process occurs within the
rhizosphere The rhizosphere is the narrow region of soil or substrate that is directly influenced by root secretions and associated soil microorganisms known as the root microbiome. Soil pores in the rhizosphere can contain many bacteria and other microor ...
, which is the layer of soil that surrounds the roots. Plants release carbohydrates and acids that stimulate microorganism activity which results in the biodegradation of the organic contaminants. This means that the microorganisms are able to digest and break down the toxic substances into harmless form. Phytostimulation has been shown to be effective in degrading petroleum hydrocarbons, PCBs, and PAHs. Phytostimulation can also involve aquatic plants supporting active populations of microbial degraders, as in the stimulation of
atrazine Atrazine is a chlorinated herbicide of the triazine class. It is used to prevent pre-emergence broadleaf weeds in crops such as maize (corn), soybean and sugarcane and on turf, such as golf courses and residential lawns. Atrazine's primary manufa ...
degradation by
hornwort Hornworts are a group of non-vascular Embryophytes (land plants) constituting the division Anthocerotophyta (). The common name refers to the elongated horn-like structure, which is the sporophyte. As in mosses and liverworts, hornworts have a ...
.


Phytovolatilization

Phytovolatilization is the removal of substances from soil or water with release into the air, sometimes as a result of phytotransformation to more volatile and/or less polluting substances. In this process, contaminants are taken up by the plant and through transpiration, evaporate into the atmosphere. This is the most studied form of phytovolatilization, where volatilization occurs at the stem and leaves of the plant, however indirect phytovolatilization occurs when contaminants are volatilized from the root zone. Selenium (Se) and Mercury (Hg) are often removed from soil through phytovolatilization. Poplar trees are one of the most successful plants for removing VOCs through this process due to its high transpiration rate.


Rhizofiltration

Rhizofiltration Rhizofiltration is a form of phytoremediation that involves filtering contaminated groundwater, surface water and wastewater through a mass of roots to remove toxic substances or excess nutrients. Overview Rhizofiltration is a type of phytoremedia ...
is a process that filters water through a mass of roots to remove toxic substances or excess
nutrients A nutrient is a substance used by an organism to survive, grow, and reproduce. The requirement for dietary nutrient intake applies to animals, plants, fungi, and protists. Nutrients can be incorporated into cells for metabolic purposes or excret ...
. The pollutants remain absorbed in or adsorbed to the roots. This process is often used to clean up contaminated groundwater through planting directly in the contaminated site or through removing the contaminated water and providing it to these plants in an off-site location. In either case though, typically plants are first grown in a greenhouse under precise conditions.


Biological hydraulic containment

Biological hydraulic containment occurs when some plants, like poplars, draw water upwards through the soil into the roots and out through the plant, which decreases the movement of soluble contaminants downwards, deeper into the site and into the groundwater.


Phytodesalination

Phytodesalination uses halophytes (plants adapted to saline soil) to extract salt from the soil to improve its fertility.


Role of genetics

Breeding programs and
genetic engineering Genetic engineering, also called genetic modification or genetic manipulation, is the modification and manipulation of an organism's genes using technology. It is a set of technologies used to change the genetic makeup of cells, including t ...
are powerful methods for enhancing natural phytoremediation capabilities, or for introducing new capabilities into plants. Genes for phytoremediation may originate from a
micro-organism A microorganism, or microbe,, ''mikros'', "small") and ''organism'' from the el, ὀργανισμός, ''organismós'', "organism"). It is usually written as a single word but is sometimes hyphenated (''micro-organism''), especially in olde ...
or may be transferred from one plant to another variety better adapted to the environmental conditions at the cleanup site. For example, genes encoding a nitroreductase from a bacterium were inserted into tobacco and showed faster removal of TNT and enhanced resistance to the toxic effects of TNT.. Researchers have also discovered a mechanism in plants that allows them to grow even when the pollution concentration in the soil is lethal for non-treated plants. Some natural, biodegradable compounds, such as exogenous
polyamine A polyamine is an organic compound having more than two amino groups. Alkyl polyamines occur naturally, but some are synthetic. Alkylpolyamines are colorless, hygroscopic, and water soluble. Near neutral pH, they exist as the ammonium derivatives. ...
s, allow the plants to tolerate concentrations of pollutants 500 times higher than untreated plants, and to absorb more pollutants.


Hyperaccumulators and biotic interactions

A plant is said to be a
hyperaccumulator A hyperaccumulator is a plant capable of growing in soil or water with very high concentrations of metals, absorbing these metals through their roots, and concentrating extremely high levels of metals in their tissues. The metals are concentrated a ...
if it can concentrate the pollutants in a minimum percentage which varies according to the pollutant involved (for example: more than 1000 mg/kg of dry weight for
nickel Nickel is a chemical element with symbol Ni and atomic number 28. It is a silvery-white lustrous metal with a slight golden tinge. Nickel is a hard and ductile transition metal. Pure nickel is chemically reactive but large pieces are slow to ...
,
copper Copper is a chemical element with the symbol Cu (from la, cuprum) and atomic number 29. It is a soft, malleable, and ductile metal with very high thermal and electrical conductivity. A freshly exposed surface of pure copper has a pinkis ...
,
cobalt Cobalt is a chemical element with the symbol Co and atomic number 27. As with nickel, cobalt is found in the Earth's crust only in a chemically combined form, save for small deposits found in alloys of natural meteoric iron. The free element, pr ...
,
chromium Chromium is a chemical element with the symbol Cr and atomic number 24. It is the first element in group 6. It is a steely-grey, lustrous, hard, and brittle transition metal. Chromium metal is valued for its high corrosion resistance and hardne ...
or
lead Lead is a chemical element with the symbol Pb (from the Latin ) and atomic number 82. It is a heavy metal that is denser than most common materials. Lead is soft and malleable, and also has a relatively low melting point. When freshly cu ...
; or more than 10,000 mg/kg for
zinc Zinc is a chemical element with the symbol Zn and atomic number 30. Zinc is a slightly brittle metal at room temperature and has a shiny-greyish appearance when oxidation is removed. It is the first element in group 12 (IIB) of the periodi ...
or
manganese Manganese is a chemical element with the symbol Mn and atomic number 25. It is a hard, brittle, silvery metal, often found in minerals in combination with iron. Manganese is a transition metal with a multifaceted array of industrial alloy use ...
).. This capacity for accumulation is due to hypertolerance, or ''phytotolerance'': the result of adaptative evolution from the plants to hostile environments through many generations. A number of interactions may be affected by metal hyperaccumulation, including protection, interferences with neighbour plants of different species, mutualism (including
mycorrhiza   A mycorrhiza (from Greek μύκης ', "fungus", and ῥίζα ', "root"; pl. mycorrhizae, mycorrhiza or mycorrhizas) is a symbiotic association between a fungus and a plant. The term mycorrhiza refers to the role of the fungus in the plant ...
e,
pollen Pollen is a powdery substance produced by seed plants. It consists of pollen grains (highly reduced microgametophytes), which produce male gametes (sperm cells). Pollen grains have a hard coat made of sporopollenin that protects the gametophyt ...
and seed dispersal), commensalism, and
biofilm A biofilm comprises any syntrophic consortium of microorganisms in which cells stick to each other and often also to a surface. These adherent cells become embedded within a slimy extracellular matrix that is composed of extracellular ...
.


Tables of hyperaccumulators

* Hyperaccumulators table – 1 : Al, Ag, As, Be, Cr, Cu, Mn, Hg, Mo, Naphthalene, Pb, Pd, Pt, Se, Zn * Hyperaccumulators table – 2 : Nickel * Hyperaccumulators table – 3 : Radionuclides (Cd, Cs, Co, Pu, Ra, Sr, U), Hydrocarbons, Organic Solvents.


Phytoscreening

As plants are able to translocate and accumulate particular types of contaminants, plants can be used as
biosensor A biosensor is an analytical device, used for the detection of a chemical substance, that combines a biological component with a physicochemical detector. The ''sensitive biological element'', e.g. tissue, microorganisms, organelles, cell recep ...
s of subsurface contamination, thereby allowing investigators to quickly delineate contaminant plumes... Chlorinated solvents, such as
trichloroethylene The chemical compound trichloroethylene is a halocarbon commonly used as an industrial solvent. It is a clear, colourless non-flammable liquid with a chloroform-like sweet smell. It should not be confused with the similar 1,1,1-trichloroethane, ...
, have been observed in tree trunks at concentrations related to groundwater concentrations.. To ease field implementation of phytoscreening, standard methods have been developed to extract a section of the tree trunk for later laboratory analysis, often by using an
increment borer An increment borer is a specialized tool used to extract a section of wood tissue from a living tree with relatively minor injury to the plant itself. The tool consists of a handle, an auger bit and a small, half circular metal tray ( the core ...
. Phytoscreening may lead to more optimized site investigations and reduce contaminated site cleanup costs.


See also

*
Bioaugmentation Biological augmentation is the addition of archaea or bacterial cultures required to speed up the rate of degradation of a contaminant. Organisms that originate from contaminated areas may already be able to break down waste, but perhaps inefficien ...
*
Biodegradation Biodegradation is the breakdown of organic matter by microorganisms, such as bacteria and fungi. It is generally assumed to be a natural process, which differentiates it from composting. Composting is a human-driven process in which biodegrada ...
*
Bioremediation Bioremediation broadly refers to any process wherein a biological system (typically bacteria, microalgae, fungi, and plants), living or dead, is employed for removing environmental pollutants from air, water, soil, flue gasses, industrial effluent ...
*
Constructed wetland A constructed wetland is an artificial wetland to treat sewage, greywater, stormwater runoff or industrial wastewater. It may also be designed for land reclamation after mining, or as a mitigation step for natural areas lost to land development. ...
*
Mycorrhizal bioremediation Mycorrhizal amelioration of heavy metals or pollutants is a process by which mycorrhizal fungi in a mutualistic relationship with plants can sequester toxic compounds from the environment, as a form of bioremediation. Mycorrhizae-plant partners ...
*
Mycoremediation Mycoremediation (from ancient Greek ''μύκης (mukēs)'', meaning "fungus" and the suffix ''-remedium'', in Latin meaning 'restoring balance') is a form of bioremediation in which fungi-based remediation methods are used to decontaminate the en ...
* Phytotreatment


References


Bibliography


"Phytoremediation Website" — Includes reviews, conference announcements, lists of companies doing phytoremediation, and bibliographies.

"An Overview of Phytoremediation of Lead and Mercury" June 6 2000. The Hazardous Waste Clean-Up Information Web Site.


* ttps://web.archive.org/web/20060513182943/http://www.bnl.gov/erd/Peconic/Factsheet/Phytoextract.pdf "Phytoextraction", February 2000. Brookhaven National Laboratory 2000.
"Phytoextraction of Metals from Contaminated Soil" April 18, 2001. M.M. Lasat

July 2002. Donald Bren School of Environment Science & Management.


* ttps://web.archive.org/web/20060223071356/http://www.envirotools.org/factsheets/phytoremediation.shtml "Phytoremediation" June 2001, Todd Zynda.
"Phytoremediation of Lead in Residential Soils in Dorchester, MA" May, 2002. Amy Donovan Palmer, Boston Public Health Commission.


* * * * * [https://doi.org/10.1016/j.jenvman.2019.03.038 "Ancona V, Barra Caracciolo A, Campanale C, De Caprariis B, Grenni P, Uricchio VF, Borello D, 2019. Gasification Treatment of Poplar Biomass Produced in a Contaminated Area Restored using Plant Assisted Bioremediation. Journal of Environmental Management"]


External links


Missouri Botanical Garden (host): Phytoremediation website
{{Webarchive, url=https://web.archive.org/web/20101017145853/http://www.mobot.org/jwcross/phytoremediation/ , date=2010-10-17 — ''Review Articles, Conferences, Phytoremediation Links, Research Sponsors, Books and Journals, and Recent Research''.
International Journal of Phytoremediation
— ''devoted to the publication of current laboratory and field research describing the use of plant systems to remediate contaminated environments.''

— ''fro
Agricultural Research magazine
'

— ''co-founded by
John Todd (Canadian biologist) John Todd (born 1939) is a Canadian biologist working in the general field of ecological design. He addresses problems of food production and wastewater processing by using ecosystems technologies that incorporate plants, animals and bacteria. ...
'' Bioremediation Environmental soil science Environmental engineering Environmental terminology Pollution control technologies Conservation projects Ecological restoration Soil contamination Biotechnology Sustainable technologies