In
chemistry
Chemistry is the science, scientific study of the properties and behavior of matter. It is a natural science that covers the Chemical element, elements that make up matter to the chemical compound, compounds made of atoms, molecules and ions ...
, homolysis () or homolytic fission is the dissociation of a
molecular bond
A covalent bond is a chemical bond that involves the sharing of electrons to form electron pairs between atoms. These electron pairs are known as shared pairs or bonding pairs. The stable balance of attractive and repulsive forces between atoms ...
by a process where each of the fragments (an
atom
Every atom is composed of a nucleus and one or more electrons bound to the nucleus. The nucleus is made of one or more protons and a number of neutrons. Only the most common variety of hydrogen has no neutrons.
Every solid, liquid, gas, and ...
or
molecule
A molecule is a group of two or more atoms held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions which satisfy this criterion. In quantum physics, organic chemistry, and bioch ...
) retains one of the originally bonded
electron
The electron ( or ) is a subatomic particle with a negative one elementary electric charge. Electrons belong to the first generation of the lepton particle family,
and are generally thought to be elementary particles because they have no kn ...
s. During homolytic fission of a neutral molecule with an even number of electrons, two
free radical
A daughter category of ''Ageing'', this category deals only with the biological aspects of ageing.
Ageing
Ailments of unknown cause
Biogerontology
Biological processes
Causes of death
Cellular processes
Gerontology
Life extension
Metabo ...
s will be generated. That is, the two electrons involved in the original bond are distributed between the two fragment species. Bond cleavage is also possible by a process called
heterolysis.
The energy involved in this process is called
bond dissociation energy
The bond-dissociation energy (BDE, ''D''0, or ''DH°'') is one measure of the strength of a chemical bond . It can be defined as the standard enthalpy change when is cleaved by homolysis to give fragments A and B, which are usually radical s ...
(BDE). BDE is defined as the "
enthalpy
Enthalpy , a property of a thermodynamic system, is the sum of the system's internal energy and the product of its pressure and volume. It is a state function used in many measurements in chemical, biological, and physical systems at a constant ...
(per
mole
Mole (or Molé) may refer to:
Animals
* Mole (animal) or "true mole", mammals in the family Talpidae, found in Eurasia and North America
* Golden moles, southern African mammals in the family Chrysochloridae, similar to but unrelated to Talpida ...
) required to break a given bond of some specific
molecular entity A molecular entity, or chemical entity, is "any constitutionally or isotopically distinct atom, molecule, ion, ion pair, Radical (chemistry), radical, radical ion, complex (chemistry), complex, conformational isomerism, conformer, etc., identifiable ...
by homolysis," symbolized as ''D''. BDE is dependent on the
strength
Strength may refer to:
Physical strength
*Physical strength, as in people or animals
*Hysterical strength, extreme strength occurring when people are in life-and-death situations
*Superhuman strength, great physical strength far above human ca ...
of the bond, which is determined by factors relating to the stability of the resulting
radical species.
Because of the relatively high energy required to break bonds in this manner, homolysis occurs primarily under certain circumstances:
* Light (i.e.
ultraviolet
Ultraviolet (UV) is a form of electromagnetic radiation with wavelength from 10 nanometer, nm (with a corresponding frequency around 30 Hertz, PHz) to 400 nm (750 Hertz, THz), shorter than that of visible light, but longer than ...
radiation)
* Heat
**Certain intramolecular bonds, such as the O–O bond of a
peroxide
In chemistry, peroxides are a group of compounds with the structure , where R = any element. The group in a peroxide is called the peroxide group or peroxo group. The nomenclature is somewhat variable.
The most common peroxide is hydrogen p ...
, are weak enough to spontaneously homolytically dissociate with a small amount of heat.
**High temperatures in the absence of oxygen (
pyrolysis
The pyrolysis (or devolatilization) process is the thermal decomposition of materials at elevated temperatures, often in an inert atmosphere. It involves a change of chemical composition. The word is coined from the Greek-derived elements ''py ...
) can induce homolytic elimination of
carbon compounds
Carbon compounds are defined as chemical substances containing carbon. More compounds of carbon exist than any other chemical element except for hydrogen. Organic carbon compounds are far more numerous than inorganic carbon compounds. In general ...
.
**Most bonds homolyse at temperatures above 200°C.
[Clayden, Jonathan, Greeves, Nick, Warren, Stuart. (2012). Organic Chemistry (Second ed.). Oxford: OUP. ]
Additionally, in some cases pressure can induce the formation of radicals. These conditions excite electrons to the next highest molecular orbital, thus creating a
singly occupied molecular orbital
In chemistry, HOMO and LUMO are types of molecular orbitals. The acronyms stand for ''highest occupied molecular orbital'' and ''lowest unoccupied molecular orbital'', respectively. HOMO and LUMO are sometimes collectively called the ''frontie ...
(SOMO).
Adenosylcobalamin
Adenosylcobalamin (AdoCbl), also known as coenzyme B12, cobamamide, and dibencozide, is, along with methylcobalamin (MeCbl), one of the biologically active forms of vitamin B12.
Adenosylcobalamin participates as a cofactor in radical-mediated 1,2 ...
is the
cofactor which creates the
deoxyadenosyl radical
A deoxyadenosyl radical is a free radical that is structurally related to adenosine by removal of a 5′-hydroxy group from adenosine. This radical occurs in nature as a reactive intermediate. It is generated by radical SAM
Radical SAM is a desig ...
by homolytic cleavage of a cobalt-carbon bond in reactions catalysed by
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase (, MCM), mitochondrial, also known as methylmalonyl-CoA isomerase, is a protein that in humans is encoded by the ''MUT'' gene. This vitamin B12-dependent enzyme catalyzes the isomerization of methylmalonyl-CoA to succiny ...
,
isobutyryl-CoA mutase
In enzymology, an isobutyryl-CoA mutase () is an enzyme that catalyzes the chemical reaction
:2-methylpropanoyl-CoA \rightleftharpoons butanoyl-CoA
Hence, this enzyme has one substrate, 2-methylpropanoyl-CoA, and one product, butanoyl-CoA.
T ...
and related enzymes. This triggers rearrangement reactions in the carbon framework of the substrates on which the enzymes act.
Factors that drive homolysis
Homolytic cleavage is driven by the ability of a molecule to absorb energy from light or heat, and the bond dissociation energy (
enthalpy
Enthalpy , a property of a thermodynamic system, is the sum of the system's internal energy and the product of its pressure and volume. It is a state function used in many measurements in chemical, biological, and physical systems at a constant ...
). If the radical species is better able to stabilize the free radical, the energy of the SOMO will be lowered, as will the bond dissociation energy. Bond dissociation energy is determined by multiple factors:
*
Electronegativity
Electronegativity, symbolized as , is the tendency for an atom of a given chemical element to attract shared electrons (or electron density) when forming a chemical bond. An atom's electronegativity is affected by both its atomic number and the d ...
**Less electronegative atoms are better stabilizers of radicals, meaning that a bond between two electronegative atoms will have a higher BDE than a similar molecule with two less electronegative atoms.
*
Polarizability
Polarizability usually refers to the tendency of matter, when subjected to an electric field, to acquire an electric dipole moment in proportion to that applied field. It is a property of all matter, considering that matter is made up of elementar ...
**The larger the electron cloud, the better an atom can stabilize the radical (i.e. Iodine is very polarizable and a radical stabilizer).
*
Orbital hybridization
In chemistry, orbital hybridisation (or hybridization) is the concept of mixing atomic orbitals to form new ''hybrid orbitals'' (with different energies, shapes, etc., than the component atomic orbitals) suitable for the pairing of electrons to f ...
**The s-character of an orbital relates to how close electrons are to the nucleus. In the case of a radical, s-character more specifically relates to how close the single electron is to the nucleus. Radicals decrease in stability as they are closer to the nucleus, because the electron affinity of the orbital increases. As a general rule, hybridizations minimizing s-character increase the stability of radicals, and decreases the bond dissociation energy (i.e. sp
3 hybridization is most stabilizing).
*
Resonance
Resonance describes the phenomenon of increased amplitude that occurs when the frequency of an applied periodic force (or a Fourier component of it) is equal or close to a natural frequency of the system on which it acts. When an oscillatin ...
**Radicals can be stabilized by the donation of negative charge from resonance, or in other words,
electron delocalization
In chemistry, delocalized electrons are electrons in a molecule, ion or solid metal that are not associated with a single atom or a covalent bond.IUPAC Gold Boo''delocalization''/ref>
The term delocalization is general and can have slightly diff ...
.
*
Hyperconjugation
In organic chemistry, hyperconjugation (σ-conjugation or no-bond resonance) refers to the delocalization of electrons with the participation of bonds of primarily σ-character. Usually, hyperconjugation involves the interaction of the electron ...
**Carbon radicals are stabilized by hyperconjugation, meaning that more substituted carbons are more stable, and hence have lower BDEs.
**In 2005, Gronert proposed an alternative hypothesis involving the relief of substituent group
steric strain Van der Waals strain is strain resulting from Van der Waals repulsion when two substituents in a molecule approach each other with a distance less than the sum of their Van der Waals radii.
Van der Waals strain is also called Van der Waals repuls ...
(as opposed to the before accepted paradigm, which suggests that carbon radicals are stabilized via alkyl groups).
[J. Org. Chem. 2006, 71, 3, 1209–1219
Publication Date:January 4, 2006
https://doi.org/10.1021/jo052363t]
*The
captodative effect
**Radicals can be stabilized by a synergistic effect of both
electron-withdrawing group
In chemistry, an electron-withdrawing group (EWG) is a substituent that has some of the following kinetic and thermodynamic implications:
*with regards to electron transfer, electron-withdrawing groups enhance the oxidizing power tendency of the ...
and
electron-donating group
In chemistry, electron-rich is jargon that is used in multiple related meanings with either or both kinetic and thermodynamic implications:
*with regards to electron-transfer, electron-rich species have low ionization energy and/or are reducing a ...
substituents.
**Electron-withdrawing groups often contain empty π* orbitals that are low in energy and overlap with the SOMO, creating two new orbitals: one that is lower in energy and stabilizing to the radical, and an empty higher energy orbital. Similarly, electron-donating orbitals combine with the radical SOMO, allowing a lone pair to lower in energy and the radical to enter the new higher energy orbital. This interaction is net stabilizing.
See also
*
Alpha cleavage Alpha-cleavage (α-cleavage) in organic chemistry refers to the act of breaking the carbon-carbon bond adjacent to the carbon bearing a specified functional group.
Mass spectrometry
Generally this topic is discussed when covering tandem mass spe ...
References
Chemical reactions
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