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''Delftia acidovorans'' is a
Gram-negative Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall ...
, motile, non-sporulating, rod-shaped bacterium known for its ability to biomineralize gold and bioremediation characteristics. It was first isolated from soil in Delft, Netherlands. The bacterium was originally categorized as ''Pseudomonas acidovorans'' and ''Comamonas acidovorans'' before being reclassified as ''Delftia acidovorans''.


History

''Delftia acidovorans'' was originally known as ''Comamonas acidovorans''. It was renamed due to rRNA relatedness and differences from other microbes within the ''Comamonadaceae'' family. These differences are evidenced by phylogenetic and phenotypic data. The new name, ''Delftia acidovorans'', is a reference to the city of Delft, where it was first discovered and recorded.


Biology and biochemistry


Type and morphology

''Delftia acidovorans'' is a saphrophyte,
Gram-negative Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall ...
, non-sporulating, non-denitrifying, non-fermentative rod shaped bacterium. D. acidovorans exists as a single cell or in pairs that are 0.4-0.8 ųM wide and 2.5-4.1 ųM long. ''D. acidovorans'' is motile through polar or bipolar tufts of flagella. Tufts can have one to five flagella.


Strains and phylogeny

''Delftia acidovorans'' exists as part of the
Betaproteobacteria Betaproteobacteria are a class of Gram-negative bacteria, and one of the eight classes of the phylum Pseudomonadota (synonym Proteobacteria). The ''Betaproteobacteria'' are a class comprising over 75 genera and 400 species of bacteria. Togeth ...
lineage within the
Comamonadaceae The Comamonadaceae are a family of the Betaproteobacteria.Willems A., J. De Ley, M. Gillis, and K. Kersters. ''Comamonadaceae, a New Family Encompassing the Acidovorans rRNA Complex, Including Variovorax paradoxus gen. nov.,comb. nov. for Alcali ...
family''. D. acidovorans'' strains SPH1, ATCC 1 15668, and Cs 1-4 are closely related. While strains CCUG 247B and CCUG 15835 belong to ''Delftia acidovorans'', they are more similar to '' Delftia tsuruhatensis''. CCUG 247B and CCUG 15835 are often grouped with '' D. tsuruhatensis'' rather than ''D. acidovorans.''


Metabolism

''Delftia acidovorans'' is
mesophilic A mesophile is an organism that grows best in moderate temperature, neither too hot nor too cold, with an optimum growth range from . The optimum growth temperature for these organisms is 37°C. The term is mainly applied to microorganisms. Organi ...
and the optimal growing temperature is 30 °C. It will not survive in psychrophilic conditions. ''D. acidovorans'' is a non-halophile that prefers environments with minimal to none salt concentrations for growth. ''D. acidovorans'' strains Cs1-4 and SPH-1 are
aerobic Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics, a form of aerobic exercise * Aerobic respiration, the aerobic process of cel ...
bacteria. ''Delftia acidovorans strains'' Cs1-4 and SPH-1 can use phenanthrene, pyruvate, vanillate, succinate, Formic acid,
gluconic acid Gluconic acid is an organic compound with molecular formula C6H12O7 and condensed structural formula HOCH2(CHOH)4COOH. It is one of the 16 stereoisomers of 2,3,4,5,6-pentahydroxyhexanoic acid. In aqueous solution at neutral pH, gluconic acid f ...
,
hydroxybutyric acid Hydroxybutyric acid is a group of four-carbon organic compounds that have both hydroxyl and carboxylic acid functional groups. They can be viewed as derivatives of butyric acid. The carboxylate anion and the esters of hydroxybutyric acids are kno ...
,
lactic acid Lactic acid is an organic acid. It has a molecular formula . It is white in the solid state and it is miscible with water. When in the dissolved state, it forms a colorless solution. Production includes both artificial synthesis as well as nat ...
and propionic acid as a carbon source. ''D. acidovorans'' does not produce urease, is catalase and oxidase positive, and oxidizes fructose and mannitol


Biomineralization

''Delftia acidovorans'' is one of the few bacteria, along with ''
Cupriavidus metallidurans ''Cupriavidus metallidurans'' is a non-spore-forming, Gram-negative bacterium which is adapted to survive several forms of heavy metal stress. As a model and industrial system It is an ideal subject to study heavy metal disturbance of cell ...
'', that can metabolize gold. Au3+ is reduced extracellularly by the non-ribosomal secondary metabolite delftibactin. Delftibactin is a unique metabolite, as it can protect the bacteria from gold toxicity as well as reduce gold ions to solid form. Delftibactin can remove gold from sludges containing seawater and calcium carbonate, and is also capable of retrieving gold from electronic waste.
Biohydrometallurgy Biohydrometallurgy is a technique in the world of metallurgy that utilizes biological agents (bacteria) to recover and treat metals such as copper. Modern biohydrometallurgy advances started with the bioleaching of copper more efficiently in the 195 ...
techniques using ''D. acidovorans'' improve recycling profitability and are sustainable alternatives to cyanide leaching. Lead can also be recovered from discarded electronics with ''D. acidovorans''. Attempts to induce delftibactin expression in ''Escherichia coli'' were unsuccessful due to the toxicity of the DelH protein.


Bioremediation and biomanufacturing

''Delftia acidovorans'' is capable of converting toxic metals like selenium and chromium ions into harmless products. It can also degrade phenanthrene, which is a carbon source from polycylic aromatic hydrocarbons (PAHs). Phenanthrene is a common environmental pollutant. ''Delftia acidovorans'' can be used to manufacture
polyhydroxyalkanoates Polyhydroxyalkanoates or PHAs are polyesters produced in nature by numerous microorganisms, including through bacterial fermentation of sugars or lipids. When produced by bacteria they serve as both a source of energy and as a carbon store. M ...
(PHAs). PHAs are a favorable alternative towards traditional plastic equipment used in medical settings. Traditional plastic manufacturing is resource-consuming and polluting, while PHA production through ''D. acidovorans'' is a more sustainable solution.


Role in disease

''Delftia acidovorans'' is an emergent opportunistic pathogen that demonstrates antibiotic resistance. The infection can cause bacteremia,
keratitis Keratitis is a condition in which the eye's cornea, the clear dome on the front surface of the eye, becomes inflamed. The condition is often marked by moderate to intense pain and usually involves any of the following symptoms: pain, impaired e ...
,
pneumonia Pneumonia is an inflammatory condition of the lung primarily affecting the small air sacs known as alveoli. Symptoms typically include some combination of productive or dry cough, chest pain, fever, and difficulty breathing. The severity ...
,
empyema An empyema () is a collection or gathering of pus within a naturally existing anatomical cavity. For example, pleural empyema is empyema of the pleural cavity. It must be differentiated from an abscess, which is a collection of pus in a newly fo ...
, otitis, and
peritonitis Peritonitis is inflammation of the localized or generalized peritoneum, the lining of the inner wall of the abdomen and cover of the abdominal organs. Symptoms may include severe pain, swelling of the abdomen, fever, or weight loss. One part o ...
. Known sources of infection include contaminated water and
catheters In medicine, a catheter (/ˈkæθətər/) is a thin tube made from medical grade materials serving a broad range of functions. Catheters are medical devices that can be inserted in the body to treat diseases or perform a surgical procedure. Cat ...
. ''D. acidovorans'' should be considered a causative organism in patients when water or soil contamination is suspected. ''D. acidovorans'' has been isolated from clinical settings as well, such as RO systems, surgical vacuums, and operating bay sinks. Some strains can tolerate
chlorhexidine Chlorhexidine (CHX) (commonly known by the salt forms chlorhexidine gluconate and chlorhexidine digluconate (CHG) or chlorhexidine acetate) is a disinfectant and antiseptic that is used for skin disinfection before surgery and to sterilize surgi ...
, a common surgical disinfectant. Infections of ''D. acidovorans'' can be confirmed through an orange indole test. Antibiotic resistance to aminoglycosides is common.


References


External links


Type strain of ''Delftia acidovorans'' at Bac''Dive'' - the Bacterial Diversity Metadatabase
{{Taxonbar, from=Q4167431 Comamonadaceae Bacteria described in 1999