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Clumped isotopes are heavy
isotope Isotopes are two or more types of atoms that have the same atomic number (number of protons in their nuclei) and position in the periodic table (and hence belong to the same chemical element), and that differ in nucleon numbers (mass numb ...
s that are bonded to other heavy isotopes. The relative abundance of clumped isotopes (and multiply-substituted
isotopologues In chemistry, isotopologues are molecules that differ only in their isotopic composition. They have the same chemical formula and bonding arrangement of atoms, but at least one atom has a different number of neutrons than the parent. An examp ...
) in molecules such as
methane Methane ( , ) is a chemical compound with the chemical formula (one carbon atom bonded to four hydrogen atoms). It is a group-14 hydride, the simplest alkane, and the main constituent of natural gas. The relative abundance of methane on Ea ...
, nitrous oxide, and carbonate is an area of active investigation. The carbonate clumped-isotope thermometer, or "13C–18O order/disorder carbonate thermometer", is a new approach for paleoclimate reconstruction, based on the temperature dependence of the clumping of 13C and 18O into bonds within the
carbonate A carbonate is a salt of carbonic acid (H2CO3), characterized by the presence of the carbonate ion, a polyatomic ion with the formula . The word ''carbonate'' may also refer to a carbonate ester, an organic compound containing the carbonate ...
mineral lattice. This approach has the advantage that the 18O ratio in water is not necessary (different from the δ18O approach), but for precise paleotemperature estimation, it also needs very large and uncontaminated samples, long analytical runs, and extensive replication. Commonly used sample sources for paleoclimatological work include
coral Corals are marine invertebrates within the class Anthozoa of the phylum Cnidaria. They typically form compact colonies of many identical individual polyps. Coral species include the important reef builders that inhabit tropical oceans and ...
s,
otolith An otolith ( grc-gre, ὠτο-, ' ear + , ', a stone), also called statoconium or otoconium or statolith, is a calcium carbonate structure in the saccule or utricle of the inner ear, specifically in the vestibular system of vertebrates. The sa ...
s,
gastropods The gastropods (), commonly known as snails and slugs, belong to a large taxonomic class of invertebrates within the phylum Mollusca called Gastropoda (). This class comprises snails and slugs from saltwater, from freshwater, and from land. The ...
,
tufa Tufa is a variety of limestone formed when carbonate minerals precipitate out of water in unheated rivers or lakes. Geothermally heated hot springs sometimes produce similar (but less porous) carbonate deposits, which are known as travertin ...
, bivalves, and
foraminifera Foraminifera (; Latin for "hole bearers"; informally called "forams") are single-celled organisms, members of a phylum or class of amoeboid protists characterized by streaming granular ectoplasm for catching food and other uses; and commonly ...
. Results are usually expressed as Δ47 (said as "cap 47"), which is the deviation of the ratio of isotopologues of CO2 with a
molecular weight A molecule is a group of two or more atoms held together by attractive forces known as chemical bonds; depending on context, the term may or may not include ions which satisfy this criterion. In quantum physics, organic chemistry, and bioch ...
of 47 to those with a weight of 44 from the ratio expected if they were randomly distributed.


Background

Molecules made up of elements with multiple isotopes can vary in their isotopic composition, these different mass molecules are called isotopologues. Isotopologues such as 12C18O17O, contain multiple heavy isotopes of oxygen substituting for the more common 16O, and are termed multiply-substituted isotopologues. The multiply-substituted isotopologue 13C18O16O contains a bond between two of these heavier isotopes (13C and 18O), which is a "clumped" isotope bond. The abundance of masses for a given molecule (e.g. CO2) can be predicted using the relative abundance of isotopes of its constituent atoms (13C/12C, 18O/16O and 17O/16O). The relative abundance of each isotopologue (e.g. mass-47 CO2) is proportional to the relative abundance of each isotopic species. : This predicted abundance assumes a non-biased stochastic distribution of isotopes, natural materials tend to deviate from these stochastic values, the study of which forms the basis of clumped isotope geochemistry. When a heavier isotope substitutes for a lighter isotope (e.g., 18O for 16O), the chemical bond's vibration will be slower, lowering its
zero-point energy Zero-point energy (ZPE) is the lowest possible energy that a quantum mechanical system may have. Unlike in classical mechanics, quantum systems constantly fluctuate in their lowest energy state as described by the Heisenberg uncertainty pri ...
. In other words, thermodynamic stability is related to the isotopic composition of the molecule. 12C16O32− (≈98.2%), 13C16O32− (≈1.1%), 12C18O16O22− (≈0.6%) and 12C17O16O22− (≈0.11%) are the most abundant isotopologues (≈99%) for the carbonate ions, controlling the bulk δ13C, δ17O and δ18O values in natural carbonate minerals. Each of these isopotologes has different thermodynamic stability. For a carbonate crystal at thermodynamic equilibrium, the relative abundances of the carbonate ion isotopologues is controlled by reactions such as: The equilibrium constants for these reactions are temperature-dependent, with a tendency for heavy isotopes to "clump" with each other (increasing the proportions of multiply substituted isotopologues) as temperature decreases. Reaction 1 will be driven to the right with decreasing temperature, to the left with increasing temperature. Therefore, the equilibrium constant for this reaction can be used as an paleotemperature indicator, as long as the temperature dependence of this reaction and the relative abundances of the carbonate ion isotopologues are known.


Differences from the conventional δ18O analysis

In conventional δ18O analysis, both the δ18O values in carbonates and water are needed to estimate paleoclimate. However, for many times and places, the δ18O in water can only be inferred, and also the 16O/18O ratio between carbonate and water may vary with the change in temperature. Therefore, the accuracy of the thermometer may be compromised. Whereas for the carbonate clumped-isotope thermometer, the equilibrium is independent of the isotope compositions of waters from which carbonates grew. Therefore, the only information needed is the abundance of bonds between rare, heavy isotopes within the carbonate mineral.


Methods

# Extract from carbonates by reaction with anhydrous
phosphoric acid Phosphoric acid (orthophosphoric acid, monophosphoric acid or phosphoric(V) acid) is a colorless, odorless phosphorus-containing solid, and inorganic compound with the chemical formula . It is commonly encountered as an 85% aqueous solution, w ...
. (there is no direct way to measure the abundance of CO32−s in with high enough precision). The phosphoric acid temperature is often held between 25° to 90 °C and can be as high as 110 °C. # Purify the that has been extracted. This step removes contaminant gases like
hydrocarbon In organic chemistry, a hydrocarbon is an organic compound consisting entirely of hydrogen and carbon. Hydrocarbons are examples of group 14 hydrides. Hydrocarbons are generally colourless and hydrophobic, and their odors are usually weak or ...
s and halocarbons which can be removed by gas chromatography. # Mass spectrometric analyses of purified , to obtain δ13C, δ18O, and Δ47 (abundance of mass-47 ) values. (Precision needs to be as high as ≈10−5, for the isotope signals of interest are often less than ≈10−3.)


Applications


Paleoenvironment

Clumped isotopes analyses have traditionally been used in lieu of conventional δ18O analyses when the δ18O of seawater or source water is poorly constrained. While conventional δ18O analysis solves for temperature as a function of both carbonate and water δ18O, clumped isotope analyses can provide temperature estimates that are independent of the source water δ18O. Δ47-derived temperature can then be used in conjunction with carbonate δ18O to reconstruct δ18O of the source water, thus providing information on the water with which the carbonate was equilibrated. Clumped isotope analyses thus allow for estimates of two key environmental variables: temperature and water δ18O. These variables are especially useful for reconstructing past climates, as they can provide information on a wide range of environmental properties. For example, temperature variability can imply changes in solar irradiance, greenhouse gas concentration, or
albedo Albedo (; ) is the measure of the diffuse reflection of solar radiation out of the total solar radiation and measured on a scale from 0, corresponding to a black body that absorbs all incident radiation, to 1, corresponding to a body that refl ...
, while changes in water δ18O can be used to estimate changes in ice volume, sea level, or rainfall intensity and location. Studies have used temperatures derived from clumped isotopes for varied and numerous paleoclimate applications — to constrain δ18O of past seawater, pinpoint the timing of icehouse-hothouse transitions, track changes in ice volume through an ice age, and to reconstruct temperature changes in ancient lake basins.


Paleoaltimetry

Clumped isotope analyses have recently been used to constrain the paleoaltitude or uplift history of a region. Air temperature decreases systematically with altitude throughout the troposphere (see lapse rate). Due to the close coupling between lake water temperature and air temperature, there is a similar decrease in lake water temperature as altitude increases. Thus, variation in water temperature implied by Δ47 could indicate changes in lake altitude, driven by
tectonic uplift Tectonic uplift is the geologic uplift of Earth's surface that is attributed to plate tectonics. While isostatic response is important, an increase in the mean elevation of a region can only occur in response to tectonic processes of crustal th ...
or subsidence. Two recent studies derive the timing of the uplift of the Andes Mountains and the Altiplano Plateau, citing sharp decreases in Δ47-derived temperatures as evidence of rapid tectonic uplift.


Atmospheric science

Measurements of Δ47 can be used to constrain natural and synthetic sources of atmospheric CO2, (e.g.
respiration Respiration may refer to: Biology * Cellular respiration, the process in which nutrients are converted into useful energy in a cell ** Anaerobic respiration, cellular respiration without oxygen ** Maintenance respiration, the amount of cellul ...
and
combustion Combustion, or burning, is a high-temperature exothermic redox chemical reaction between a fuel (the reductant) and an oxidant, usually atmospheric oxygen, that produces oxidized, often gaseous products, in a mixture termed as smoke. Combus ...
), as each of these processes are associated with different average Δ47 temperatures of formation.


Paleobiology

Measurements of Δ47 can be used to better understand the physiology of extinct organisms, and to place constraints on the early development of
endotherm An endotherm (from Greek ἔνδον ''endon'' "within" and θέρμη ''thermē'' "heat") is an organism that maintains its body at a metabolically favorable temperature, largely by the use of heat released by its internal bodily functions inst ...
y, the process by which organisms regulate their internal body temperatures. Prior to the development of clumped isotope analysis, there was no straightforward way to estimate either the body temperature or body water δ18O of extinct animals. Eagle et al., 2010 measure Δ47 in bioapatite from a modern
Indian elephant The Indian elephant (''Elephas maximus indicus'') is one of four extant recognised subspecies of the Asian elephant and native to mainland Asia. Since 1986, the Asian elephant has been listed as Endangered on the IUCN Red List as the wild pop ...
,
white rhinoceros The white rhinoceros, white rhino or square-lipped rhinoceros (''Ceratotherium simum'') is the largest extant species of rhinoceros. It has a wide mouth used for grazing and is the most social of all rhino species. The white rhinoceros consists ...
,
Nile crocodile The Nile crocodile (''Crocodylus niloticus'') is a large crocodilian native to freshwater habitats in Africa, where it is present in 26 countries. It is widely distributed throughout sub-Saharan Africa, occurring mostly in the central, eastern, ...
and
American alligator The American alligator (''Alligator mississippiensis''), sometimes referred to colloquially as a gator or common alligator, is a large crocodilian reptile native to the Southeastern United States. It is one of the two extant species in the gen ...
. These animals were chosen as they span a wide range in internal body temperatures, allowing for the creation of a mathematical framework relating Δ47 of bioapatite and internal body temperature. This relationship has been applied to analyses of fossil teeth, in order to predict the body temperatures of a
woolly mammoth The woolly mammoth (''Mammuthus primigenius'') is an extinct species of mammoth that lived during the Pleistocene until its extinction in the Holocene epoch. It was one of the last in a line of mammoth species, beginning with '' Mammuthus s ...
and a sauropod dinosaur. The latest Δ47 temperature calibration for (bio) apatite of Löffler et al. 2019 covers a wide temperature range of 1 to 80 °C and was applied to a fossil
megalodon Megalodon (''Otodus megalodon''), meaning "big tooth", is an extinct species of mackerel shark that lived approximately 23 to 3.6 million years ago (Mya), from the Early Miocene to the Pliocene epochs. It was formerly thought to be a membe ...
shark tooth Sharks continually shed their teeth; some Carcharhiniformes shed approximately 35,000 teeth in a lifetime, replacing those that fall out. There are four basic types of shark teeth: dense flattened, needle-like, pointed lower with triangular upp ...
for calculating seawater temperatures and δ18O values.


Petrology and metamorphic alteration

A key premise of most clumped isotope analyses is that samples have retained their primary isotopic signatures. However, isotopic resetting or alteration, resulting from elevated temperature, can provide a different type of information about past climates. For example, when carbonate is isotopically reset by high temperatures, measurements of Δ47 can provide information about the duration and extent of metamorphic alteration. In one such study, Δ47 from late
Neoproterozoic The Neoproterozoic Era is the unit of geologic time from 1 billion to 538.8 million years ago. It is the last era of the Precambrian Supereon and the Proterozoic Eon; it is subdivided into the Tonian, Cryogenian, and Ediacaran periods. It is prec ...
Doushantou cap carbonate is used to assess the temperature evolution of the lower crust in southern China.


Cosmochemistry

Primitive meteorites have been studied using measurements of Δ47. These analyses also assume that the primary isotopic signature of the sample has been lost. In this case, measurements of Δ47 instead provide information on the high-temperature event that isotopically reset the sample. Existing Δ47 analyses on primitive meteorites have been used to infer the duration and temperature of aqueous alteration events, as well as to estimate the isotopic composition of the alteration fluid.


Ore deposits

An emerging body of work highlights the application potential for clumped isotopes to reconstruct temperature and fluid properties in hydrothermal ore deposits. In mineral exploration, delineation of the heat footprint around an ore body provides critical insight into the processes that drive transport and deposition of metals. During proof of concept studies, clumped isotopes were used to provide accurate temperature reconstructions in epithermal, sediment hosted, and Mississippi Valley Type (MVT) deposits. These case studies are supported by measurement of carbonates in active geothermal settings.


Limitations

The temperature dependent relationship is subtle (). 13C18O16O22− is a rare isotopologue (≈60 ppm . Therefore, to obtain adequate precision, this approach requires long analyses (≈2–3 hours) and very large and uncontaminated samples. Clumped isotope analyses assume that measured Δ47 is composed of 13C18O16O22−, the most common isotopologue of mass 47. Corrections to account for less common isotopologues of mass 47 (e.g. 12C18O17O 16O2−) are not completely standardized between labs.


See also

* * * *
Paleothermometer A paleothermometer is a methodology that provides an estimate of the ambient temperature at the time of formation of a natural material. Most paleothermometers are based on empirically-calibrated proxy relationships, such as the tree ring or TE ...
*
Isotopic signature An isotopic signature (also isotopic fingerprint) is a ratio of non-radiogenic ' stable isotopes', stable radiogenic isotopes, or unstable radioactive isotopes of particular elements in an investigated material. The ratios of isotopes in a sample ...
* Isotope analysis *
Isotope geochemistry Isotope geochemistry is an aspect of geology based upon the study of natural variations in the relative abundances of isotopes of various elements. Variations in isotopic abundance are measured by isotope ratio mass spectrometry, and can reveal ...
*
Isotopic labeling Isotopic labeling (or isotopic labelling) is a technique used to track the passage of an isotope (an atom with a detectable variation in neutron count) through a reaction, metabolic pathway, or cell. The reactant is 'labeled' by replacing specific ...


References

{{Reflist Paleoclimatology Isotopes