CIDNP
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CIDNP (chemically induced dynamic nuclear polarization), often pronounced like "kidnip", is a nuclear magnetic resonance (NMR) technique that is used to study chemical reactions that involve
radical Radical may refer to: Politics and ideology Politics *Radical politics, the political intent of fundamental societal change *Radicalism (historical), the Radical Movement that began in late 18th century Britain and spread to continental Europe and ...
s. It detects the non-Boltzmann (non-thermal) nuclear spin state distribution produced in these reactions as enhanced absorption or emission signals. CIDNP was discovered in 1967 by Bargon and Fischer, and, independently, by Ward and Lawler. Early theories were based on dynamic nuclear polarisation (hence the name) using the Overhauser Effect. The subsequent experiments, however, have found that in many cases DNP fails to explain CIDNP polarization phase. In 1969 an alternative explanation which relies on the nuclear spins affecting the probability of a radical pair recombining or separating. It is related to chemically induced dynamic electron polarization (CIDEP) insofar as the radical-pair mechanism explains both phenomena.


Concept and experimental set-up

The effect is detected by
NMR spectroscopy Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy or magnetic resonance spectroscopy (MRS), is a spectroscopic technique to observe local magnetic fields around atomic nuclei. The sample is placed in a magnetic fiel ...
, usually using 1H NMR spectrum, as enhanced
absorption Absorption may refer to: Chemistry and biology * Absorption (biology), digestion **Absorption (small intestine) *Absorption (chemistry), diffusion of particles of gas or liquid into liquid or solid materials *Absorption (skin), a route by which ...
or emission signals ("negative peaks"). The effect arises when unpaired
electrons The electron ( or ) is a subatomic particle with a negative one elementary electric charge. Electrons belong to the first generation of the lepton particle family, and are generally thought to be elementary particles because they have no ...
(radicals) are generated during a chemical reaction involving heat or light within the
NMR tube An NMR tube is a thin glass walled tube used to contain samples in nuclear magnetic resonance spectroscopy. Typically NMR tubes come in 5 mm diameters but 10 mm and 3 mm samples are known. It is important that the tubes are uniforml ...
. The magnetic field in the spectrometer interacts with the magnetic fields that are caused by the spins of the protons. The two spins of protons produce two slightly different energy levels. In normal conditions, slightly more nuclei, about 10 parts in a million are found in the lower energy level. In contrast, CIDNP produces greatly imbalanced populations, with far greater numbers of spins in upper energy level in some products of the reaction and greater numbers in the lower energy level in other products. The spectrometer uses radio frequencies to detect these differences.


Radical pair mechanism

The radical pair mechanism is currently accepted as the most common cause of CIDNP. This theory was proposed by Closs, and, independently, by Kaptein and Oosterhoff. There are, however, exceptions, and the DNP mechanism was found to be operational, for example, in many fluorine-containing radicals. The chemical bond is a pair of electrons with opposite spins.
Photochemical reactions Organic photochemistry encompasses organic reactions that are induced by the action of light. The absorption of ultraviolet light by organic molecules often leads to reactions. In the earliest days, sunlight was employed, while in more modern times ...
or heat can cause an electron in the bond to change its spin. The electrons are now unpaired, in what is known as a triplet state, and the bond is broken. The orientation of some of the nuclear spins will favour some unpaired electrons changing their spins and so revert to the normal pairs as chemical bonds. This quantum interaction is known as spin-orbit coupling. Other nuclear spins will exert a different influence on the triplet pairs, giving the radical pairs more time to separate and react with other molecules. Consequently, the products of recombination will have different distributions of nuclear spins from the products produced by separated radicals.


Typical photochemical reaction

The generation of CIDNP in a typical photochemical system (target +
photosensitizer Photosensitizers produce a physicochemical change in a neighboring molecule by either donating an electron to the substrate or by abstracting a hydrogen atom from the substrate. At the end of this process, the photosensitizer eventually returns to ...
, flavin in this example) is a cyclic
photochemical Photochemistry is the branch of chemistry concerned with the chemical effects of light. Generally, this term is used to describe a chemical reaction caused by absorption of ultraviolet (wavelength from 100 to 400  nm), visible light (400–7 ...
process shown schematically in Figure 1. The chain of reactions is initiated by a blue light
photon A photon () is an elementary particle that is a quantum of the electromagnetic field, including electromagnetic radiation such as light and radio waves, and the force carrier for the electromagnetic force. Photons are massless, so they always ...
, which excites the
flavin mononucleotide Flavin mononucleotide (FMN), or riboflavin-5′-phosphate, is a biomolecule produced from riboflavin (vitamin B2) by the enzyme riboflavin kinase and functions as the prosthetic group of various oxidoreductases, including NADH dehydrogenase, as ...
(FMN) photosensitizer to the singlet excited state. The
fluorescence Fluorescence is the emission of light by a substance that has absorbed light or other electromagnetic radiation. It is a form of luminescence. In most cases, the emitted light has a longer wavelength, and therefore a lower photon energy, tha ...
quantum yield The quantum yield (Φ) of a radiation-induced process is the number of times a specific event occurs per photon absorbed by the system. Applications Fluorescence spectroscopy The fluorescence quantum yield is defined as the ratio of the numb ...
of this state is rather low, and approximately half of the molecules undergo
intersystem crossing Intersystem crossing (ISC) is an isoenergetic radiationless process involving a transition between the two electronic states with different spin multiplicity. Excited Singlet and Triplet States When an electron in a molecule with a singlet ground ...
into the long-lived
triplet state In quantum mechanics, a triplet is a quantum state of a system with a spin of quantum number =1, such that there are three allowed values of the spin component, = −1, 0, and +1. Spin, in the context of quantum mechanics, is not a mechanical ...
. Triplet FMN has a remarkable
electron affinity The electron affinity (''E''ea) of an atom or molecule is defined as the amount of energy released when an electron attaches to a neutral atom or molecule in the gaseous state to form an anion. ::X(g) + e− → X−(g) + energy Note that this is ...
. If a molecule with a low
ionization potential Ionization, or Ionisation is the process by which an atom or a molecule acquires a negative or positive charge by gaining or losing electrons, often in conjunction with other chemical changes. The resulting electrically charged atom or molecule i ...
(e.g.
phenol Phenol (also called carbolic acid) is an aromatic organic compound with the molecular formula . It is a white crystalline solid that is volatile. The molecule consists of a phenyl group () bonded to a hydroxy group (). Mildly acidic, it req ...
s, polyaromatics) is present in the system, the diffusion-limited electron transfer reaction forms a spin-correlated triplet electron transfer state – a radical pair. The
kinetics Kinetics ( grc, κίνησις, , kinesis, ''movement'' or ''to move'') may refer to: Science and medicine * Kinetics (physics), the study of motion and its causes ** Rigid body kinetics, the study of the motion of rigid bodies * Chemical ki ...
are complicated and may involve multiple protonations and
deprotonation Deprotonation (or dehydronation) is the removal (transfer) of a proton (or hydron, or hydrogen cation), (H+) from a Brønsted–Lowry acid in an acid–base reaction.Henry Jakubowski, Biochemistry Online Chapter 2A3, https://employees.csbsju.ed ...
s, and hence exhibit pH dependence. The radical pair may either cross over to a singlet electron state and then recombine, or separate and perish in side reactions. The relative probability of these two pathways for a given radical pair depends on the nuclear spin state and leads to the nuclear spin state sorting and observable nuclear polarization.


Applications

Detected as enhanced absorptive or emissive signals in the
NMR Nuclear magnetic resonance (NMR) is a physical phenomenon in which nuclei in a strong constant magnetic field are perturbed by a weak oscillating magnetic field (in the near field) and respond by producing an electromagnetic signal with ...
spectra of the reaction products, CIDNP has been exploited for the last 30 years to characterise transient free radicals and their
reaction mechanism In chemistry, a reaction mechanism is the step by step sequence of elementary reactions by which overall chemical change occurs. A chemical mechanism is a theoretical conjecture that tries to describe in detail what takes place at each stage of ...
s. In certain cases, CIDNP also offers the possibility of large improvements in
NMR Nuclear magnetic resonance (NMR) is a physical phenomenon in which nuclei in a strong constant magnetic field are perturbed by a weak oscillating magnetic field (in the near field) and respond by producing an electromagnetic signal with ...
sensitivity. The principal application of this photo-CIDNP technique, as devised by Kaptein in 1978, has been to
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s in which the aromatic amino acid residues
histidine Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an α-amino group (which is in the protonated –NH3+ form under biological conditions), a carboxylic acid group (which is in the de ...
,
tryptophan Tryptophan (symbol Trp or W) is an α-amino acid that is used in the biosynthesis of proteins. Tryptophan contains an α-amino group, an α- carboxylic acid group, and a side chain indole, making it a polar molecule with a non-polar aromatic ...
and
tyrosine -Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a non-essential amino acid with a polar side group. The word "tyrosine" is from the Gr ...
can be polarized using flavins or other aza-aromatics as photosensitisers. The key feature of the method is that only
solvent A solvent (s) (from the Latin '' solvō'', "loosen, untie, solve") is a substance that dissolves a solute, resulting in a solution. A solvent is usually a liquid but can also be a solid, a gas, or a supercritical fluid. Water is a solvent for ...
accessible
histidine Histidine (symbol His or H) is an essential amino acid that is used in the biosynthesis of proteins. It contains an α-amino group (which is in the protonated –NH3+ form under biological conditions), a carboxylic acid group (which is in the de ...
,
tryptophan Tryptophan (symbol Trp or W) is an α-amino acid that is used in the biosynthesis of proteins. Tryptophan contains an α-amino group, an α- carboxylic acid group, and a side chain indole, making it a polar molecule with a non-polar aromatic ...
and
tyrosine -Tyrosine or tyrosine (symbol Tyr or Y) or 4-hydroxyphenylalanine is one of the 20 standard amino acids that are used by cells to synthesize proteins. It is a non-essential amino acid with a polar side group. The word "tyrosine" is from the Gr ...
residues can undergo the radical pair reactions that result in nuclear polarization. Photo-CIDNP has thus been used to probe the surface structure of
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
s, both in native and partially folded states, and their interactions with molecules that modify the accessibility of the reactive side chains. Although usually observed in liquids, the photo-CIDNP effect has also been detected in solid state, for example on 13C and 15N nuclei in photosynthetic reaction centres, where significant nuclear polarization can accumulate as a result of spin selection processes in the electron transfer reactions.


See also

*
Dynamic nuclear polarisation Dynamic nuclear polarization (DNP) results from transferring spin polarization from electrons to nuclei, thereby aligning the nuclear spins to the extent that electron spins are aligned. Note that the alignment of electron spins at a given magnetic ...
*
Electron paramagnetic resonance Electron paramagnetic resonance (EPR) or electron spin resonance (ESR) spectroscopy is a method for studying materials that have unpaired electrons. The basic concepts of EPR are analogous to those of nuclear magnetic resonance (NMR), but the spin ...


References


Further reading

# # # # # # # {{cite journal , doi=10.1021/ja0623616, title=Photo-CIDNP MAS NMR in Intact Cells ofRhodobactersphaeroidesR26: Molecular and Atomic Resolution at Nanomolar Concentration, year=2006, last1=Prakash, first1=Shipra, last2=Alia, last3=Gast, first3=Peter, last4=De Groot, first4=Huub J. M., last5=Matysik, first5=Jörg, last6=Jeschke, first6=Gunnar, journal=Journal of the American Chemical Society, volume=128, issue=39, pages=12794–12799, pmid=17002374 Physical chemistry Nuclear magnetic resonance