Brix (database)
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BriX is a database containing some
protein Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, respo ...
fragments from 4 to 14 residue from non-homologous proteins. There are very few loops registered in Brix, so to address this issue, Loop Brix was added to the system to help structure non-regular elements. These are organized with clustering of end to end elements, and their distance between residues that flank the top of the
peptide Peptides (, ) are short chains of amino acids linked by peptide bonds. Long chains of amino acids are called proteins. Chains of fewer than twenty amino acids are called oligopeptides, and include dipeptides, tripeptides, and tetrapeptides. A ...
. Currently, the system also encourages user submitted structures to be uploaded, so long as they match Brix classes.


See also

* Protein structure


References


External links

* http://brix.crg.es Protein databases Protein structure Peptides Computer-related introductions in 2010 {{Biodatabase-stub