Aspergillus Tubingensis
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''Aspergillus tubingensis'' is a darkly pigmented species of fungus in the genus ''Aspergillus'' section Nigri. It is often confused with ''
Aspergillus niger ''Aspergillus niger'' is a mold classified within the ''Nigri'' section of the ''Aspergillus'' genus. The ''Aspergillus'' genus consists of common molds found throughout the environment within soil and water, on vegetation, in fecal matter, on de ...
'' due to their similar morphology and habitat. ''A. tubingensis'' is often involved in food spoilage of fruits and
wheat Wheat is a grass widely cultivated for its seed, a cereal grain that is a worldwide staple food. The many species of wheat together make up the genus ''Triticum'' ; the most widely grown is common wheat (''T. aestivum''). The archaeologi ...
, and
industrial fermentation Industrial fermentation is the intentional use of fermentation in manufacturing products useful to humans. In addition to the mass production of fermented foods and drinks, industrial fermentation has widespread applications in chemical industry ...
. This species is a rare agent of opportunistic infection.


Background

''Aspergillus tubingensis'' was first discovered by Raoul Mosseray in 1934. The
conidia A conidium ( ; ), sometimes termed an asexual chlamydospore or chlamydoconidium (), is an asexual, non-motile spore of a fungus. The word ''conidium'' comes from the Ancient Greek word for dust, ('). They are also called mitospores due to the ...
are heavily roughened, 3-5 µm in diameter. Whitish to pink
sclerotia A sclerotium (; (), is a compact mass of hardened fungal mycelium containing food reserves. One role of sclerotia is to survive environmental extremes. In some higher fungi such as ergot, sclerotia become detached and remain dormant until favor ...
ranging from 0.5-0.8 mm in diameter are often produced. ''A. tubingensis'' exists exclusively as an asexual fungus but is understood to be phylogenetically closely related to the other so-called black Aspergilli and sexual states in the genus '' Petromyces''. The production of
Ochratoxin A Ochratoxin A—a toxin produced by different ''Aspergillus'' and ''Penicillium'' species — is one of the most-abundant food-contaminating mycotoxins. It is also a frequent contaminant of water-damaged houses and of heating ducts. Human exposure ...
(OTA) was previously thought to be a variable character dependent on strain; however, the production of OTA is thought to be a consistent feature with prior reports of variation arising from the inclusion of misidentified strains (e.g., ''A. niger'') or inconsistencies in test conditions such as incubation time, temperature, and growth medium. Other extrolites produced by this fungus include: asperazine, pyranoigrin A, pyrophen, funalenone, and kotanins. When cultured on creatine sucrose agar (CREA) culture medium, ''A. tubingensis'' demonstrates good acid production (strong yellow colour change) and a moderate growth rate. ''A. tubingensis'' and ''A. niger'' have similar morphology and are difficult to distinguish without resorting to more advanced methods. One rapid test that is useful in distinguishing the two taxa, the Ehrlich reaction, queries the presence of indole. In this test, ''A. tubingensis'' is negative in contrast to ''A. niger'' which produces a positive result. Sequences of protein coding genes such as
Calmodulin Calmodulin (CaM) (an abbreviation for calcium-modulated protein) is a multifunctional intermediate calcium-binding messenger protein expressed in all eukaryotic cells. It is an intracellular target of the secondary messenger Ca2+, and the bind ...
and
β-tubulin Tubulin in molecular biology can refer either to the tubulin protein superfamily of globular proteins, or one of the member proteins of that superfamily. α- and β-tubulins polymerize into microtubules, a major component of the eukaryotic cytoske ...
also reliable differentiate the two taxa. The production of asperazine by ''A. tubingensis'' also separates this species from other morphologically similar Aspergilli.


Habitat and ecology

''Aspergillus tubingensis'' exhibits high resistance to
ultraviolet Ultraviolet (UV) is a form of electromagnetic radiation with wavelength from 10 nanometer, nm (with a corresponding frequency around 30 Hertz, PHz) to 400 nm (750 Hertz, THz), shorter than that of visible light, but longer than ...
light and can grow in elevated temperatures between , with optimal growth between . In the temperature range of , this species is able to produce the
mycotoxin A mycotoxin (from the Greek μύκης , "fungus" and τοξίνη , "toxin") is a toxic secondary metabolite produced by organisms of kingdom Fungi and is capable of causing disease and death in both humans and other animals. The term 'mycotoxin' ...
,
ochratoxin Ochratoxins are a group of mycotoxins produced by some ''Aspergillus'' species (mainly ''A. ochraceus'' and A. ''carbonarius'', but also by 33% of ''A. niger'' industrial strains) and some ''Penicillium'' species, especially ''P. verrucosum''. ...
A (OTA). The fungus is tolerant of low pH and has a preference for environments of relatively low
water activity Water activity (''aw'') is the partial vapor pressure of water in a solution divided by the standard state partial vapor pressure of water. In the field of food science, the standard state is most often defined as pure water at the same tempera ...
. Originally recognized from
Chiang Mai Chiang Mai (, from th, เชียงใหม่ , nod, , เจียงใหม่ ), sometimes written as Chiengmai or Chiangmai, is the largest city in northern Thailand, the capital of Chiang Mai province and the second largest city in ...
,
Thailand Thailand ( ), historically known as Siam () and officially the Kingdom of Thailand, is a country in Southeast Asia, located at the centre of the Indochinese Peninsula, spanning , with a population of almost 70 million. The country is bo ...
and
China China, officially the People's Republic of China (PRC), is a country in East Asia. It is the world's most populous country, with a population exceeding 1.4 billion, slightly ahead of India. China spans the equivalent of five time zones and ...
, ''A. tubingensis'' is found worldwide in warm climate regions. It is often seen in indoor environments of
Croatia , image_flag = Flag of Croatia.svg , image_coat = Coat of arms of Croatia.svg , anthem = "Lijepa naša domovino"("Our Beautiful Homeland") , image_map = , map_caption = , capit ...
and
Turkey Turkey ( tr, Türkiye ), officially the Republic of Türkiye ( tr, Türkiye Cumhuriyeti, links=no ), is a list of transcontinental countries, transcontinental country located mainly on the Anatolia, Anatolian Peninsula in Western Asia, with ...
, with some appearances in the
Netherlands ) , anthem = ( en, "William of Nassau") , image_map = , map_caption = , subdivision_type = Sovereign state , subdivision_name = Kingdom of the Netherlands , established_title = Before independence , established_date = Spanish Netherl ...
,
Hungary Hungary ( hu, Magyarország ) is a landlocked country in Central Europe. Spanning of the Carpathian Basin, it is bordered by Slovakia to the north, Ukraine to the northeast, Romania to the east and southeast, Serbia to the south, Croatia a ...
, Thailand, and
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. This species is commonly isolated from soil and plant debris as well as agricultural crops such as
grape A grape is a fruit, botanically a berry, of the deciduous woody vines of the flowering plant genus ''Vitis''. Grapes are a non- climacteric type of fruit, generally occurring in clusters. The cultivation of grapes began perhaps 8,000 years ago, ...
s,
cocoa Cocoa may refer to: Chocolate * Chocolate * ''Theobroma cacao'', the cocoa tree * Cocoa bean, seed of ''Theobroma cacao'' * Chocolate liquor, or cocoa liquor, pure, liquid chocolate extracted from the cocoa bean, including both cocoa butter and ...
,
coffee Coffee is a drink prepared from roasted coffee beans. Darkly colored, bitter, and slightly acidic, coffee has a stimulant, stimulating effect on humans, primarily due to its caffeine content. It is the most popular hot drink in the world. S ...
, and
cereal A cereal is any Poaceae, grass cultivated for the edible components of its grain (botanically, a type of fruit called a caryopsis), composed of the endosperm, Cereal germ, germ, and bran. Cereal Grain, grain crops are grown in greater quantit ...
, and as an agent of rot on
apple An apple is an edible fruit produced by an apple tree (''Malus domestica''). Apple fruit tree, trees are agriculture, cultivated worldwide and are the most widely grown species in the genus ''Malus''. The tree originated in Central Asia, wh ...
s, grapes, and cereals.


Commercial uses

Because of the paucity of mycotoxin production by ''A. tubingensis'', it has been explored for use in biotechnology and industrial applications. ''A. tubingensis'' is generally recognized as safe (GRAS) by the American food and drug administration (
FDA The United States Food and Drug Administration (FDA or US FDA) is a federal agency of the Department of Health and Human Services. The FDA is responsible for protecting and promoting public health through the control and supervision of food s ...
). This species is notable for the production enzymes such
amylase An amylase () is an enzyme that catalyses the hydrolysis of starch (Latin ') into sugars. Amylase is present in the saliva of humans and some other mammals, where it begins the chemical process of digestion. Foods that contain large amounts of ...
,
lipase Lipase ( ) is a family of enzymes that catalyzes the hydrolysis of fats. Some lipases display broad substrate scope including esters of cholesterol, phospholipids, and of lipid-soluble vitamins and sphingomyelinases; however, these are usually tr ...
,
glucose oxidase The glucose oxidase enzyme (GOx or GOD) also known as notatin (EC number 1.1.3.4) is an oxidoreductase that catalyses the oxidation of glucose to hydrogen peroxide and D-glucono-δ-lactone. This enzyme is produced by certain species of fungi and ...
,
phytase A phytase (''myo''-inositol hexakisphosphate phosphohydrolase) is any type of phosphatase enzyme that catalyzes the hydrolysis of phytic acid (myo-inositol hexakisphosphate) – an indigestible, organic form of phosphorus that is found in many pl ...
,
xylanase Endo-1,4-β-xylanase (EC 3.2.1.8, systematic name 4-β-D-xylan xylanohydrolase) is any of a class of enzymes that degrade the linear polysaccharide xylan into xylose, thus breaking down hemicellulose, one of the major components of plant cell w ...
,
acid phosphatase Acid phosphatase (EC 3.1.3.2, acid phosphomonoesterase', phosphomonoesterase, glycerophosphatase, acid monophosphatase, acid phosphohydrolase, acid phosphomonoester hydrolase, uteroferrin, acid nucleoside diphosphate phosphatase, orthophosphoric-m ...
and xylosidase production. Amylase produced by ''A. tubingensis'' has potential use in the manufacture of
bioethanol Ethanol (abbr. EtOH; also called ethyl alcohol, grain alcohol, drinking alcohol, or simply alcohol) is an organic compound. It is an Alcohol (chemistry), alcohol with the chemical formula . Its formula can be also written as or (an ethyl ...
from distilled waste water and
molasses Molasses () is a viscous substance resulting from refining sugarcane or sugar beets into sugar. Molasses varies in the amount of sugar, method of extraction and age of the plant. Sugarcane molasses is primarily used to sweeten and flavour foods ...
residues. The fungus is also able to produce commercially scalable organic acids including
citric acid Citric acid is an organic compound with the chemical formula HOC(CO2H)(CH2CO2H)2. It is a colorless weak organic acid. It occurs naturally in citrus fruits. In biochemistry, it is an intermediate in the citric acid cycle, which occurs in t ...
,
ascorbic acid Vitamin C (also known as ascorbic acid and ascorbate) is a water-soluble vitamin found in citrus and other fruits and vegetables, also sold as a dietary supplement and as a topical 'serum' ingredient to treat melasma (dark pigment spots) an ...
, and wood preservatives. It is also capable of degrading
polyurethane Polyurethane (; often abbreviated PUR and PU) refers to a class of polymers composed of organic chemistry, organic units joined by carbamate (urethane) links. In contrast to other common polymers such as polyethylene and polystyrene, polyurethan ...
. In commercial baking, the use of
glucose oxidase The glucose oxidase enzyme (GOx or GOD) also known as notatin (EC number 1.1.3.4) is an oxidoreductase that catalyses the oxidation of glucose to hydrogen peroxide and D-glucono-δ-lactone. This enzyme is produced by certain species of fungi and ...
enzyme (GOD) enhances texture, size, and loaf form. ''A. tubingensis'' is part of the microbial consortium involved in the fermentation of Chinese
pu'er tea ''Pu'er'' or ''pu-erh'' is a variety of fermented tea traditionally produced in Yunnan Province, China. In the context of traditional Chinese tea production terminology, fermentation refers to microbial fermentation (called 'wet piling'), and ...
, converting tea
polyphenol Polyphenols () are a large family of naturally occurring organic compounds characterized by multiples of phenol units. They are abundant in plants and structurally diverse. Polyphenols include flavonoids, tannic acid, and ellagitannin, some of ...
s into bioactive theobromins. unreliable_source?.html" ;"title="Reliability of Wikipedia">unreliable source?">Reliability of Wikipedia">unreliable source?/sup> In crop production, soil amendation with ''A. tubingensis'' has been shown to enhance corn yield through its ability to dissolve
phosphate In chemistry, a phosphate is an anion, salt, functional group or ester derived from a phosphoric acid. It most commonly means orthophosphate, a derivative of orthophosphoric acid . The phosphate or orthophosphate ion is derived from phospho ...
s into soil and reduce alkalinity in
bauxite Bauxite is a sedimentary rock with a relatively high aluminium content. It is the world's main source of aluminium and gallium. Bauxite consists mostly of the aluminium minerals gibbsite (Al(OH)3), boehmite (γ-AlO(OH)) and diaspore (α-AlO(O ...
residues. The tolerance of ''A. tubingensis'' to conditions of high pH enhance its survival in these applications. ''A. tubingensis'' has been suggested as a biocontrol agent for the protection of
tomato The tomato is the edible berry of the plant ''Solanum lycopersicum'', commonly known as the tomato plant. The species originated in western South America, Mexico, and Central America. The Mexican Nahuatl word gave rise to the Spanish word ...
plants against the pathogenic fungus, ''
Fusarium solani ''Fusarium solani'' is a species complex of at least 26 closely related filamentous fungi in the division Ascomycota, family Nectriaceae. It is the anamorph of ''Nectria haematococca''. It is a common soil fungus and colonist of plant materials ...
''. Deleterious effects of this fungus on crop plants are also known. For example, ''A. tubingensis'' has been documented in grape
vineyard A vineyard (; also ) is a plantation of grape-bearing vines, grown mainly for winemaking, but also raisins, table grapes and non-alcoholic grape juice. The science, practice and study of vineyard production is known as viticulture. Vineyards ...
s, alongside other black Aspergilli including '' A. carbonarius'' and ''A. niger''. In grape production, these Aspergilli have been implicated as important contributors to OTA in grape
must Must (from the Latin ''vinum mustum'', "young wine") is freshly crushed fruit juice (usually grape juice) that contains the skins, seeds, and stems of the fruit. The solid portion of the must is called pomace and typically makes up 7–23% of t ...
. In 2018, they were investigated for their ability to decompose plastic such as polyurethane in weeks rather than decades. "The plastic-busting potential was discovered last year by a team of scientists from China and Pakistan, who sought to isolate the fungi that were degrading polyurethane at a waste disposal site in Islamabad. The fungi were identified as aspergillus tubingensis and the scientists observed how it broke down bonds between the different polymers in weeks, rather than the decades it can take plastic to naturally disintegrate."


Opportunistic disease

Fungal
keratitis Keratitis is a condition in which the eye's cornea, the clear dome on the front surface of the eye, becomes inflamed. The condition is often marked by moderate to intense pain and usually involves any of the following symptoms: pain, impaired e ...
(
cornea The cornea is the transparent front part of the eye that covers the iris, pupil, and anterior chamber. Along with the anterior chamber and lens, the cornea refracts light, accounting for approximately two-thirds of the eye's total optical power ...
l infection) can be caused by members of the black Aspergilli including ''A. tubingensis''. ''Aspergillus tubingensis'' has also been implicated in the infection of
maxilla The maxilla (plural: ''maxillae'' ) in vertebrates is the upper fixed (not fixed in Neopterygii) bone of the jaw formed from the fusion of two maxillary bones. In humans, the upper jaw includes the hard palate in the front of the mouth. The t ...
ry bone following a tooth extraction.


References


Bibliography

* Russell, Jonathan R, Huang, Jeffrey, Anand, Pria, Kucera, Kaury, Sandoval, Amanda G, Dantzler, Kathleen W, Hickman, DaShawn, Jee, Justin, Kimovec, Farrah M, Koppstein, David, Marks, Daniel H, Mittermiller, Paul A, Núñez, Salvador Joel, Santiago, Marina, Townes, Maria A, Vishnevetsky, Michael, Williams, Neely E, Vargas, Mario Percy Núñez, Boulanger, Lori-Ann, Bascom-Slack, Carol, and Strobel, Scott A. "Biodegradation of Polyester Polyurethane by Endophytic Fungi." Applied and Environmental Microbiology 77.17 (2011): 6076-084. Web. * Álvarez-Barragán, Joyce, Domínguez-Malfavón, Lilianha, Vargas-Suárez, Martín, González-Hernández, Ricardo, Aguilar-Osorio, Guillermo, and Loza-Tavera, Herminia. "Biodegradative Activities of Selected Environmental Fungi on a Polyester Polyurethane Varnish and Polyether Polyurethane Foams." Applied and Environmental Microbiology 82.17 (2016): 5225-235. Web. * Gilbert, Marianne. ''Brydsons Plastics Materials''. Butterworth-Heinemann Is an Imprint of Elsevier, 2017. {{Taxonbar, from=Q736504 tubingensis Organisms breaking down plastic Fungi described in 1934