Stem rot is a disease caused by a fungus infection in the stem. Fungus that causes stem rot are in the ''

Rhizoctonia ''Rhizoctonia'' is a genus of fungi in the order Cantharellales. Species form thin, effused, corticioid basidiocarps (fruit bodies), but are most frequently found in their sterile, anamorphic state. ''Rhizoctonia'' species are saprotrophic, but ...

'', ''

Fusarium ''Fusarium'' is a large genus of filamentous fungi, part of a group often referred to as hyphomycetes, widely distributed in soil and associated with plants. Most species are harmless saprobes, and are relatively abundant members of the soil mi ...

'' or ''

Pythium ''Pythium'' is a genus of parasitic oomycetes. They were formerly classified as fungi. Most species are plant parasites, but ''Pythium insidiosum'' is an important pathogen of animals, causing pythiosis. The feet of the fungus gnat are frequent ...

'' genera. Stem rot can readily infect crops that are in their vegetative or flowering stages. The disease can survive up to five years in the soil. Symptoms of stem rot includes staining of infected area, reduced crop yield and crop failure. The disease can be spread through the use of unfiltered water as well as unsterilized tools. Also leaving previous dead roots in soil can increase the risk of stem rot. Spores can also enter the plant through injured stem tissue on the plant including from insect attacks. The fungus impedes stem functions like transporting nutrients. It can cause water to leak through the lesions of stem tissue. Common infected crop plants are soybeans and potatoes. An issue with maintaining this disease is the lack of management by crop producers. Producers of soybeans tend to not manage for the disease because it is not normally yield limiting in a large area. Fungicides can be used to manage the disease as well as burning the crop after harvest or letting it decompose.Giesler, Loren J. "Soybean Disease." Sclerotinia Stem Rot,. University of Nebraska-Lincoln, n.d. Web. 17 Dec. 2014

Stalk rot

Species that cause stalk rot include: Causative chemical agents produced by these fungal species may include

mycotoxin A mycotoxin (from the Greek μύκης , "fungus" and τοξίνη , "toxin") is a toxic secondary metabolite produced by organisms of kingdom Fungi and is capable of causing disease and death in both humans and other animals. The term 'mycotoxin' ...

Trichothecene The trichothecenes are a large family of chemically related mycotoxins. They are produced by various species of ''Fusarium'', ''Myrothecium'', ''Trichoderma''/''Podostroma'', '' Trichothecium'', ''Cephalosporium'', '' Verticimonosporium'', and '' ...

Nematode The nematodes ( or grc-gre, Νηματώδη; la, Nematoda) or roundworms constitute the phylum Nematoda (also called Nemathelminthes), with plant-Parasitism, parasitic nematodes also known as eelworms. They are a diverse animal phylum inhab ...

s may cause symptoms similar to stem or stalk rots.

References

{{Reflist Fungal plant pathogens and diseases