Alexander F. Schier
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Alexander F. Schier (born 1964) is a Professor of Cell Biology and the Director of the Biozentrum
University of Basel The University of Basel (Latin: ''Universitas Basiliensis'', German: ''Universität Basel'') is a university in Basel, Switzerland. Founded on 4 April 1460, it is Switzerland's oldest university and among the world's oldest surviving universit ...
, Switzerland. Schier received a B.A. in cell biology in 1988 from th
Biozentrum
of the
University of Basel The University of Basel (Latin: ''Universitas Basiliensis'', German: ''Universität Basel'') is a university in Basel, Switzerland. Founded on 4 April 1460, it is Switzerland's oldest university and among the world's oldest surviving universit ...
, Switzerland, followed by a PhD in cell biology in 1992 under Walter J. Gehring, also from the University of Basel, Switzerland. He conducted his postdoctoral research in Wolfgang Driever's lab at th
Massachusetts General Hospital and Harvard University
in Boston, US. In 1996, Schier was recruited as assistant professor in the Developmental Genetics Program to th
Skirball Institute
and Department of Cell Biology, NYU School of Medicine. From 2005 to 2019, he was a professor at th
Department of Molecular and Cellular Biology
Harvard University, Faculty of Arts and Sciences. In 2013 he became the Leo Erikson Life Sciences Professor. He chaired the Department of Molecular and Cellular Biology from 2014 to 2017. Since 2017 Schier is a site director of the Allen Discovery Center for Cell Lineage Tracing. In 2018, Schier became the Director of the Biozentrum of the University of Basel as well as Professor of Cell Biology.


Research

Schier is internationally recognized for his pioneering work on vertebrate development using zebrafish (''Danio rerio'') as a model organism. During his postdoctoral work, Schier and colleagues performed one of the first large-scale forward genetic screens in a vertebrate. In his own lab, Schier has made fundamental contributions to the understanding of the molecular basis of vertebrate
embryogenesis An embryo is an initial stage of development of a multicellular organism. In organisms that reproduce sexually, embryonic development is the part of the life cycle that begins just after fertilization of the female egg cell by the male sperm ...
, including
signaling In signal processing, a signal is a function that conveys information about a phenomenon. Any quantity that can vary over space or time can be used as a signal to share messages between observers. The ''IEEE Transactions on Signal Processing'' ...
,Zhang, J., Talbot, W.S., and Schier, A.F. (1998). Positional cloning identifies zebrafish one-eyed pinhead as a permissive EGF-related ligand required during gastrulation. Cell 92, 241-251.Gritsman, K., Zhang, J., Cheng, S., Heckscher, E., Talbot, W.S., and Schier, A.F. (1999). The EGF-CFC protein one-eyed pinhead is essential for nodal signaling. Cell 97, 121-132.Chen, Y. and Schier, A.F. (2001). The zebrafish nodal signal squint functions as a morphogen. Nature 411, 607-610.Choi, W.-Y., Giraldez, A.J. and Schier, A.F. (2007). Target Protectors reveal dampening and balancing of Nodal agonist and antagonist by miR-430. Science 318, 271-274.Mueller, P. Rogers, K.W., Jordan, B.M.; Lee, J.S., Robson, D., Ramanathan, S., and Schier A.F. (2012). Differential diffusivity of Nodal and Lefty underlies a reaction-diffusion patterning system. Science 336, 721-4.Pauli, A., Norris, M.L., Valen, E., Chew, G.-L., Gagnon, J.A., Zimmerman, S., Mitchell, A., Ma, J., Dubrulle, J., Reyon, D., Tsai, S.Q., Joung, J.K., Saghatelian, A., and Schier, A.F. (2014). Toddler: an embryonic signal that promotes cell movement via Apelin receptors. Science 343, 1248636
cell fate determination Within the field of developmental biology, one goal is to understand how a particular cell develops into a final cell type, known as fate determination. Within an embryo, several processes play out at the cellular and tissue level to create an organ ...
,
cell movement Cell most often refers to: * Cell (biology), the functional basic unit of life Cell may also refer to: Locations * Monastic cell, a small room, hut, or cave in which a religious recluse lives, alternatively the small precursor of a monastery w ...
, the maternal-zygotic transition,Giraldez, A.J., Mishima, Y., Rihel, J., Grocock, R.J., Van Dongen, S., Inoue, K., Enright, A.J. and Schier, A.F. (2006). Zebrafish miR-430 promotes deadenylation and clearance of maternal mRNAs. Science 312, 75-79.
microRNA MicroRNA (miRNA) are small, single-stranded, non-coding RNA molecules containing 21 to 23 nucleotides. Found in plants, animals and some viruses, miRNAs are involved in RNA silencing and post-transcriptional regulation of gene expression. miRN ...
s,
chromatin Chromatin is a complex of DNA and protein found in eukaryotic cells. The primary function is to package long DNA molecules into more compact, denser structures. This prevents the strands from becoming tangled and also plays important roles in r ...
and
non-coding RNAs A non-coding RNA (ncRNA) is a functional RNA molecule that is not translated into a protein. The DNA sequence from which a functional non-coding RNA is transcribed is often called an RNA gene. Abundant and functionally important types of non-c ...
.Pauli, A., Valen, E., Lin, M.F., Garber, M., Vastenhouw, N.L., Levin, J.Z., Fan, L., Sandelin, A., Rinn, J.L., Regev, A., and Schier, A.F. (2012). Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis. Genome Research 22, 577-91. Epub 2011 Nov 22. Schier's more recent interest in behavior has established zebrafish as a model for
sleep Sleep is a sedentary state of mind and body. It is characterized by altered consciousness, relatively inhibited sensory activity, reduced muscle activity and reduced interactions with surroundings. It is distinguished from wakefulness by a de ...
and
behavior Behavior (American English) or behaviour (British English) is the range of actions and mannerisms made by individuals, organisms, systems or artificial entities in some environment. These systems can include other systems or organisms as wel ...
al research, determined neural circuits that underlie
sleep Sleep is a sedentary state of mind and body. It is characterized by altered consciousness, relatively inhibited sensory activity, reduced muscle activity and reduced interactions with surroundings. It is distinguished from wakefulness by a de ...
identified small molecule sleep regulators and studied the roles of schizophrenia-associated genes REF Thyme Cell 2019. He has contributed to the development of zebrafish as model system, including positional cloning, germ-line replacement to generate maternal-effect mutants, photobleaching and photo conversion,
Brainbow Brainbow is a process by which individual neurons in the brain can be distinguished from neighboring neurons using fluorescent proteins. By randomly expressing different ratios of red, green, and blue derivatives of green fluorescent protein in in ...
imaging, brain activity atlas,Randlett, O., Wee, C., Naumann, E.A., Nnaemeka, O., Schoppik, D., Fitzgerald, J.E., Portugues, R., Lacoste, A., Riegler, C., Engert, F.*, and Schier, A.F. * (2015). Whole-brain activity mapping onto a zebrafish brain atlas. Nature Methods 12, 1039-46. small molecule profiling, transcriptomicsSatija, R., Farrell, J., Gennert, D., Schier, A.F., and Regev, A. (2015). Seurat: Spatial reconstruction of single-cell gene expression. Nature Biotechnology 33, 495-502. and epigenomics, gene annotation,Chew, G.-L., Pauli, A, and Schier, A.F. (2016). Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish. Nature Communications 7, 11663. CRISPR/
Cas9 Cas9 (CRISPR associated protein 9, formerly called Cas5, Csn1, or Csx12) is a 160 kilodalton protein which plays a vital role in the immunological defense of certain bacteria against DNA viruses and plasmids, and is heavily utilized in genetic e ...
genome editing,Thyme, S. and Schier, A.F. (2016). Polq-Mediated End Joining Is Essential for Surviving DNA Double-Strand Breaks during Early Zebrafish Development. Cell Reports 15, 1611-1613.Thyme, S.B., Akhmetova, L., Montague, T.G., Valen, E. and Schier, A.F. (2016). Internal guide RNA interactions interfere with Cas9-mediated cleavage. Nature Communications 7, 11750. lineage tracing by genomic barcode editingMcKenna, A., Findlay, G.F., Gagnon, J.A., Horwitz, M.S., Schier, A.F., and Shendure, J. (2016). Whole organism lineage tracing by combinatorial and cumulative genome editing. Science aaf7907. and reconstruction of developmental trajectories by single-cell RNA-sequencing.Farrell, Jeffrey A; Wang, Yiqun; Riesenfeld, Samantha J; Shekhar, Karthik; Regev, Aviv; Schier, Alexander F (2018). Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis. Science, 360 (6392), 6.


Mentoring

Schier is also well known for having an unusually high rate of placing trainees in academic positions. Previous mentees have gone on to PI positions at Yale, Princeton, Caltech, UCLA, University of Toronto, U Mass Amherst, NYU School of Medicine, University College London, MPI Dresden, University of Tokyo, UCSD, University of Calgary, MPI Tuebingen, IMP Vienna, University of Utah, Cambridge University and NIH. Key to his mentoring philosophy are five questions he has developed to sharpen the thoughts of his mentees: *Do you work on an important problem? *Do you work with sustained concentration? *Do you have a sense of urgency? *Are you able to troubleshoot? *Do you have the killer instinct to do the key experiments that will result in a coherent, conclusive and publishable study?


Awards

*1999-2002 McKnight Scholar for Neuroscience *2001-2005 Irma T. Hirschl Scholar *2002-2005 Established Investigator of the American Heart Association *2006 Harland Winfield Mossman Developmental Biologists Award of the American Asc. of Anatomists *2006-2008 McKnight Neuroscience of Brain Disorders Award *2014 Everett Mendelsohn Excellence in Mentoring Award from Harvard's Graduate Student Council *2016 NIH MERIT Award *2016 Bjorkman-Strominger-Wiley Prize for Collaboration (with Florian Engert) *2017 NIH Pioneer Award *2018 Election to EMBO *2018 Science “Breakthrough of the Year 2018” *2020 ERC Advanced Grant *2020 George Streisinger Award of the International Zebrafish Society *2020 Election to National Academy of Sciences *2020 Election to Academia Europaea *2021 Fellow of the American Association for the Advancement of Science


References


External links


Schier lab website Harvard

Schier website BiozentrumHarvard University MCB Department homepageHarvard University MCB Department Faculty: Alex Schier

Faculty of 1000
{{DEFAULTSORT:Schier, Alexander F. 1964 births Living people Harvard University faculty University of Basel alumni