Thin Layer
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Thin Layer
Thin layers are concentrated aggregations of phytoplankton and zooplankton in coastal and offshore waters that are vertically compressed to thicknesses ranging from several centimeters up to a few meters and are horizontally extensive, sometimes for kilometers. Generally, thin layers have three basic criteria: 1) they must be horizontally and temporally persistent; 2) they must not exceed a critical threshold of vertical thickness; and 3) they must exceed a critical threshold of maximum concentration. The precise values for critical thresholds of thin layers has been debated for a long time due to the vast diversity of plankton, instrumentation, and environmental conditions. Thin layers have distinct biological, chemical, optical, and acoustical signatures which are difficult to measure with traditional sampling techniques such as nets and bottles. However, there has been a surge in studies of thin layers within the past two decades due to major advances in technology and instrum ...
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Chemotaxis
Chemotaxis (from '' chemo-'' + ''taxis'') is the movement of an organism or entity in response to a chemical stimulus. Somatic cells, bacteria, and other single-cell or multicellular organisms direct their movements according to certain chemicals in their environment. This is important for bacteria to find food (e.g., glucose) by swimming toward the highest concentration of food molecules, or to flee from poisons (e.g., phenol). In multicellular organisms, chemotaxis is critical to early development (e.g., movement of sperm towards the egg during fertilization) and development (e.g., migration of neurons or lymphocytes) as well as in normal function and health (e.g., migration of leukocytes during injury or infection). In addition, it has been recognized that mechanisms that allow chemotaxis in animals can be subverted during cancer metastasis. The aberrant chemotaxis of leukocytes and lymphocytes also contribute to inflammatory diseases such as atherosclerosis, asthma, and arthr ...
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Biological Oceanography
Biological oceanography is the study of how organisms affect and are affected by the physics, chemistry, and geology of the oceanographic system. Biological oceanography may also be referred to as ocean ecology, in which the root word of ecology is ''Oikos'' (oικoσ), meaning ‘house’ or ‘habitat’ in Greek. With that in mind, it is of no surprise then that the main focus of biological oceanography is on the microorganisms within the ocean; looking at how they are affected by their environment and how that affects larger marine creatures and their ecosystem.Lalli, Carol M., and Timothy R. Parsons. "Introduction." Biological Oceanography: An Introduction. First Edition ed. Tarrytown, New York: Pergamon, 1993. 7-21. Print. Biological oceanography is similar to marine biology, but is different because of the perspective used to study the ocean. Biological oceanography takes a bottom-up approach (in terms of the food web), while marine biology studies the ocean from a top-down ...
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Chemotaxis
Chemotaxis (from '' chemo-'' + ''taxis'') is the movement of an organism or entity in response to a chemical stimulus. Somatic cells, bacteria, and other single-cell or multicellular organisms direct their movements according to certain chemicals in their environment. This is important for bacteria to find food (e.g., glucose) by swimming toward the highest concentration of food molecules, or to flee from poisons (e.g., phenol). In multicellular organisms, chemotaxis is critical to early development (e.g., movement of sperm towards the egg during fertilization) and development (e.g., migration of neurons or lymphocytes) as well as in normal function and health (e.g., migration of leukocytes during injury or infection). In addition, it has been recognized that mechanisms that allow chemotaxis in animals can be subverted during cancer metastasis. The aberrant chemotaxis of leukocytes and lymphocytes also contribute to inflammatory diseases such as atherosclerosis, asthma, and arthr ...
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Pycnocline
A pycnocline is the Cline (hydrology), cline or layer where the density gradient () is greatest within a body of water. An ocean current is generated by the forces such as breaking waves, temperature and salinity differences, wind, Coriolis effect, and tides caused by the gravitational pull of celestial bodies. In addition, the physical properties in a pycnocline driven by density gradients also affect the flows and vertical profiles in the ocean. These changes can be connected to the transport of heat, salt, and nutrients through the ocean, and the pycnocline diffusion controls upwelling. Below the mixed layer, a stable density gradient (or pycnocline) separates the upper and lower water, hindering vertical transport. This separation has important biological effects on the ocean and the marine living organisms. However, vertical mixing across a pycnocline is a regular phenomenon in oceans, and occurs through shear-produced turbulence. Such mixing plays a key role in the transport ...
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Thermocline
A thermocline (also known as the thermal layer or the metalimnion in lakes) is a thin but distinct layer in a large body of fluid (e.g. water, as in an ocean or lake; or air, e.g. an atmosphere) in which temperature changes more drastically with depth than it does in the layers above or below. In the ocean, the thermocline divides the upper mixed layer from the calm deep water below. Depending largely on season, latitude, and turbulent mixing by wind, thermoclines may be a semi-permanent feature of the body of water in which they occur, or they may form temporarily in response to phenomena such as the radiative heating/cooling of surface water during the day/night. Factors that affect the depth and thickness of a thermocline include seasonal weather variations, latitude, and local environmental conditions, such as tides and currents. Oceans Most of the heat energy of the sunlight that strikes the Earth is absorbed in the first few centimeters at the ocean's surface, which ...
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Halocline
In oceanography, a halocline (from Greek ''hals'', ''halos'' 'salt' and ''klinein'' 'to slope') is a Cline (hydrology), cline, a subtype of chemocline caused by a strong, vertical salinity gradient within a body of water. Because salinity (in concert with temperature) affects the density of seawater, it can play a role in its vertical stratification (water), stratification. Increasing salinity by one kg/m3 results in an increase of seawater density of around 0.7 kg/m3. Description In the midlatitudes, an excess of evaporation over precipitation leads to surface waters being saltier than deep waters. In such regions, the vertical stratification is due to surface waters being warmer than deep waters and the halocline is destabilizing. Such regions may be prone to salt fingering, a process which results in the preferential mixing of salinity. In certain high latitude regions (such as the Arctic Ocean, Bering Sea, and the Southern Ocean) the surface waters are actually col ...
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Dinoflagellate
The dinoflagellates (Greek δῖνος ''dinos'' "whirling" and Latin ''flagellum'' "whip, scourge") are a monophyletic group of single-celled eukaryotes constituting the phylum Dinoflagellata and are usually considered algae. Dinoflagellates are mostly marine plankton, but they also are common in freshwater habitats. Their populations vary with sea surface temperature, salinity, and depth. Many dinoflagellates are photosynthetic, but a large fraction of these are in fact mixotrophic, combining photosynthesis with ingestion of prey (phagotrophy and myzocytosis). In terms of number of species, dinoflagellates are one of the largest groups of marine eukaryotes, although substantially smaller than diatoms. Some species are endosymbionts of marine animals and play an important part in the biology of coral reefs. Other dinoflagellates are unpigmented predators on other protozoa, and a few forms are parasitic (for example, ''Oodinium'' and ''Pfiesteria''). Some dinoflagellates pro ...
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Algal Bloom
An algal bloom or algae bloom is a rapid increase or accumulation in the population of algae in freshwater or marine water systems. It is often recognized by the discoloration in the water from the algae's pigments. The term ''algae'' encompasses many types of aquatic photosynthetic organisms, both macroscopic multicellular organisms like seaweed and microscopic unicellular organisms like cyanobacteria.  ''Algal bloom'' commonly refers to the rapid growth of microscopic unicellular algae, not macroscopic algae. An example of a macroscopic algal bloom is a kelp forest. Algal blooms are the result of a nutrient, like nitrogen or phosphorus from various sources (for example fertilizer runoff or other forms of nutrient pollution), entering the aquatic system and causing excessive growth of algae. An algal bloom affects the whole ecosystem. Consequences range from the benign feeding of higher trophic levels to more harmful effects like blocking sunlight from reaching other organ ...
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Red Tide
A harmful algal bloom (HAB) (or excessive algae growth) is an algal bloom that causes negative impacts to other organisms by production of natural phycotoxin, algae-produced toxins, mechanical damage to other organisms, or by other means. HABs are sometimes defined as only those algal blooms that produce toxins, and sometimes as any algal bloom that can result in severely lower oxygen saturation, oxygen levels in natural waters, killing organisms in marine habitats, marine or fresh waters. Blooms can last from a few days to many months. After the bloom dies, the microorganism, microbes that decompose the dead algae use up more of the oxygen, generating a "dead zone (ecology), dead zone" which can cause fish kill, fish die-offs. When these zones cover a large area for an extended period of time, neither fish nor plants are able to survive. Harmful algal blooms in marine environments are often called "red tides". It is sometimes unclear what causes specific HABs as their occurrence ...
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Zooplankton
Zooplankton are the animal component of the planktonic community ("zoo" comes from the Greek word for ''animal''). Plankton are aquatic organisms that are unable to swim effectively against currents, and consequently drift or are carried along by currents in the ocean, or by currents in seas, lakes or rivers. Zooplankton can be contrasted with phytoplankton, which are the plant component of the plankton community ("phyto" comes from the Greek word for ''plant''). Zooplankton are heterotrophic (other-feeding), whereas phytoplankton are autotrophic (self-feeding). This means zooplankton cannot manufacture their own food but must eat other plants or animals instead — in particular they eat phytoplankton. Zooplankton are generally larger than phytoplankton, most are microscopic, but some (such as jellyfish) are macroscopic and can be seen with the naked eye. Many protozoans (single-celled protists that prey on other microscopic life) are zooplankton, including zooflagellates, fo ...
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Phytoplankton
Phytoplankton () are the autotrophic (self-feeding) components of the plankton community and a key part of ocean and freshwater ecosystems. The name comes from the Greek words (), meaning 'plant', and (), meaning 'wanderer' or 'drifter'. Phytoplankton obtain their energy through photosynthesis, as do trees and other plants on land. This means phytoplankton must have light from the sun, so they live in the well-lit surface layers (euphotic zone) of oceans and lakes. In comparison with terrestrial plants, phytoplankton are distributed over a larger surface area, are exposed to less seasonal variation and have markedly faster turnover rates than trees (days versus decades). As a result, phytoplankton respond rapidly on a global scale to climate variations. Phytoplankton form the base of marine and freshwater food webs and are key players in the global carbon cycle. They account for about half of global photosynthetic activity and at least half of the oxygen production, despite ...
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