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Substring
In formal language theory and computer science, a substring is a contiguous sequence of characters within a string. For instance, "''the best of''" is a substring of "''It was the best of times''". In contrast, "''Itwastimes''" is a subsequence of "''It was the best of times''", but not a substring. Prefixes and suffixes are special cases of substrings. A prefix of a string S is a substring of S that occurs at the beginning of S; likewise, a suffix of a string S is a substring that occurs at the end of S. The substrings of the string "''apple''" would be: "''a''", "''ap''", "''app''", "''appl''", "''apple''", "''p''", "''pp''", "''ppl''", "''pple''", "''pl''", "''ple''", "''l''", "''le''" "''e''", "" (note the empty string at the end). Substring A string u is a substring (or factor) of a string t if there exists two strings p and s such that t = pus. In particular, the empty string is a substring of every string. Example: The string u=ana is equal to substrings (and subs ...
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Suffix Tree
In computer science, a suffix tree (also called PAT tree or, in an earlier form, position tree) is a compressed trie containing all the suffixes of the given text as their keys and positions in the text as their values. Suffix trees allow particularly fast implementations of many important string operations. The construction of such a tree for the string S takes time and space linear in the length of S. Once constructed, several operations can be performed quickly, such as locating a substring in S, locating a substring if a certain number of mistakes are allowed, and locating matches for a regular expression pattern. Suffix trees also provided one of the first linear-time solutions for the longest common substring problem. These speedups come at a cost: storing a string's suffix tree typically requires significantly more space than storing the string itself. History The concept was first introduced by . Rather than the suffix S ..n/math>, Weiner stored in his trie the ''prefix ...
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Suffix Automaton
In computer science, a suffix automaton is an efficient data structure for representing the substring index of a given string which allows the storage, processing, and retrieval of compressed information about all its substrings. The suffix automaton of a string S is the smallest directed acyclic graph with a dedicated initial vertex and a set of "final" vertices, such that paths from the initial vertex to final vertices represent the suffixes of the string. In terms of automata theory, a suffix automaton is the Minimal automaton, minimal partial deterministic finite automaton that recognizes the set of Substring, suffixes of a given String (computer science), string S=s_1 s_2 \dots s_n. The state graph of a suffix automaton is called a directed acyclic word graph (DAWG), a term that is also sometimes used for any deterministic acyclic finite state automaton. Suffix automata were introduced in 1983 by a group of scientists from the University of Denver and the University of Colo ...
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Substring Index
In computer science, a substring index is a data structure which gives substring search in a text or text collection in sublinear time. Once constructed from a document or set of documents, a substring index can be used to locate all occurrences of a pattern in time linear or near-linear in the pattern size, with no dependence or only logarithmic dependence on the document size. The phrase full-text index is often used for substring indexes. But this is ambiguous, as it is also used for regular word indexes such as inverted files and document retrieval. See full text search. General considerations These data structures typically treat their text and pattern as strings over a fixed alphabet, and search for locations where the pattern occurs as a substring of the text. The symbols of the alphabet may be characters (for instance in Unicode) but in practical applications for text retrieval it may be preferable to treat the ( stemmed) words of a document as the symbols of its alphabe ...
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String (computer Science)
In computer programming, a string is traditionally a sequence of character (computing), characters, either as a literal (computer programming), literal constant or as some kind of Variable (computer science), variable. The latter may allow its elements to be Immutable object, mutated and the length changed, or it may be fixed (after creation). A string is often implemented as an array data structure of bytes (or word (computer architecture), words) that stores a sequence of elements, typically characters, using some character encoding. More general, ''string'' may also denote a sequence (or List (abstract data type), list) of data other than just characters. Depending on the programming language and precise data type used, a variable (programming), variable declared to be a string may either cause storage in memory to be statically allocated for a predetermined maximum length or employ dynamic allocation to allow it to hold a variable number of elements. When a string appears lit ...
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Suffix Array
In computer science, a suffix array is a sorted array of all suffixes of a string. It is a data structure used in, among others, full-text indices, data-compression algorithms, and the field of bibliometrics. Suffix arrays were introduced by as a simple, space efficient alternative to suffix trees. They had independently been discovered by Gaston Gonnet in 1987 under the name ''PAT array'' . gave the first in-place \mathcal(n) time suffix array construction algorithm that is optimal both in time and space, where ''in-place'' means that the algorithm only needs \mathcal(1) additional space beyond the input string and the output suffix array. Enhanced suffix arrays (ESAs) are suffix arrays with additional tables that reproduce the full functionality of suffix trees preserving the same time and memory complexity. A sorted array of only some (rather than all) suffixes of a string is called a sparse suffix array. Definition Let S=S ..S /math> be an n-string and let S ,j/math ...
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Subsequence
In mathematics, a subsequence of a given sequence is a sequence that can be derived from the given sequence by deleting some or no elements without changing the order of the remaining elements. For example, the sequence \langle A,B,D \rangle is a subsequence of \langle A,B,C,D,E,F \rangle obtained after removal of elements C, E, and F. The relation of one sequence being the subsequence of another is a partial order. Subsequences can contain consecutive elements which were not consecutive in the original sequence. A subsequence which consists of a consecutive run of elements from the original sequence, such as \langle B,C,D \rangle, from \langle A,B,C,D,E,F \rangle, is a substring. The substring is a refinement of the subsequence. The list of all subsequences for the word "apple" would be "''a''", "''ap''", "''al''", "''ae''", "''app''", "''apl''", "''ape''", "''ale''", "''appl''", "''appe''", "''aple''", "''apple''", "''p''", "''pp''", "''pl''", "''pe''", "''ppl''", "''ppe''", " ...
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String Searching Algorithm
A string-searching algorithm, sometimes called string-matching algorithm, is an algorithm that searches a body of text for portions that match by pattern. A basic example of string searching is when the pattern and the searched text are arrays of elements of an alphabet (finite set) Σ. Σ may be a human language alphabet, for example, the letters ''A'' through ''Z'' and other applications may use a ''binary alphabet'' (Σ = ) or a ''DNA alphabet'' (Σ = ) in bioinformatics. In practice, the method of feasible string-search algorithm may be affected by the string encoding. In particular, if a variable-width encoding is in use, then it may be slower to find the ''N''th character, perhaps requiring time proportional to ''N''. This may significantly slow some search algorithms. One of many possible solutions is to search for the sequence of code units instead, but doing so may produce false matches unless the encoding is specifically designed to avoid it. Overview The most basic c ...
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Prefix
A prefix is an affix which is placed before the stem of a word. Particularly in the study of languages, a prefix is also called a preformative, because it alters the form of the word to which it is affixed. Prefixes, like other affixes, can be either inflectional, creating a new form of a word with the same basic meaning and same lexical category, or derivational, creating a new word with a new semantic meaning and sometimes also a different lexical category. Prefixes, like all affixes, are usually bound morphemes. English has no inflectional prefixes, using only suffixes for that purpose. Adding a prefix to the beginning of an English word changes it to a different word. For example, when the prefix ''un-'' is added to the word ''happy'', it creates the word ''unhappy''. The word ''prefix'' is itself made up of the stem ''fix'' (meaning "attach", in this case), and the prefix ''pre-'' (meaning "before"), both of which are derived from Latin roots. English language ...
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Prefix Order
In mathematics, especially order theory, a prefix ordered set generalizes the intuitive concept of a tree by introducing the possibility of continuous progress and continuous branching. Natural prefix orders often occur when considering dynamical systems as a set of functions from ''time'' (a totally-ordered set) to some phase space. In this case, the elements of the set are usually referred to as ''executions'' of the system. The name ''prefix order'' stems from the prefix order on words, which is a special kind of substring relation and, because of its discrete character, a tree. Formal definition A prefix order is a binary relation "≤" over a set ''P'' which is antisymmetric, transitive, reflexive, and downward total, i.e., for all ''a'', ''b'', and ''c'' in ''P'', we have that: *''a ≤ a'' (reflexivity); *if ''a ≤ b'' and ''b ≤ a'' then ''a'' = ''b'' (antisymmetry); *if ''a ≤ b'' and ''b ≤ c'' then ''a ≤ c'' (transitivity); *if ''a ≤ c'' and ''b ≤ c'' t ...
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Trie
In computer science, a trie (, ), also known as a digital tree or prefix tree, is a specialized search tree data structure used to store and retrieve strings from a dictionary or set. Unlike a binary search tree, nodes in a trie do not store their associated key. Instead, each node's ''position'' within the trie determines its associated key, with the connections between nodes defined by individual Character (computing), characters rather than the entire key. Tries are particularly effective for tasks such as autocomplete, spell checking, and IP routing, offering advantages over hash tables due to their prefix-based organization and lack of hash collisions. Every child node shares a common prefix (computer science), prefix with its parent node, and the root node represents the empty string. While basic trie implementations can be memory-intensive, various optimization techniques such as compression and bitwise representations have been developed to improve their efficiency. A n ...
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Superpermutation
In combinatorial mathematics, a superpermutation on ''n'' symbols is a string that contains each permutation of ''n'' symbols as a substring. While trivial superpermutations can simply be made up of every permutation concatenated together, superpermutations can also be shorter (except for the trivial case of ''n'' = 1) because overlap is allowed. For instance, in the case of ''n'' = 2, the superpermutation 1221 contains all possible permutations (12 and 21), but the shorter string 121 also contains both permutations. It has been shown that for 1 ≤ ''n'' ≤ 5, the smallest superpermutation on ''n'' symbols has length 1! + 2! + … + ''n''! . The first four smallest superpermutations have respective lengths 1, 3, 9, and 33, forming the strings 1, 121, 123121321, and 123412314231243121342132413214321. However, for ''n'' = 5, there are several smallest superpermutations having the length 153. One such superpermutation is shown below, while another of the same length can be obtaine ...
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