Phlorotannins
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Phlorotannins
Phlorotannins are a type of tannins found in brown algae such as kelps and rockweeds or sargassacean species, and in a lower amount also in some red algae. Contrary to hydrolysable or condensed tannins, these compounds are oligomers of phloroglucinol (polyphloroglucinols). As they are called tannins, they have the ability to precipitate proteins. It has been noticed that some phlorotannins have the ability to oxidize and form covalent bonds with some proteins. In contrast, under similar experimental conditions three types of terrestrial tannins (procyanidins, profisetinidins, and gallotannins) apparently did not form covalent complexes with proteins. These phenolic compounds are integral structural components of cell walls in brown algae, but they also seem to play many other secondary ecological roles such as protection from UV radiation and defense against grazing. Biosynthesis and localization Most of the phlorotannins' biosynthesis is still unknown, but it appears they ar ...
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Vanillin–HCl Staining
Vanillin–HCl staining (10% vanillin and 90% of a mixture of ethanol and HCl, giving an orange color) can be used to visualize the localisation of tannins in cells. The localization of phlorotannins can be investigated by light microscopy after vanillin–HCl staining.Cytological studies on physodes in the vegetative cells of Cystoseira stricter Sauvagea (Phaeophyta, Fucales). Pellegrini L, J. Cell Sci., 1980, volume 41, pages 209–231 The phlorotannins can be seen this way in physodes in brown algae. The vanillin-HCl method can be used to estimate the proanthocyanidins content in plant cells, resulting in a red color of the test in the presence of catechin Catechin is a flavan-3-ol, a type of secondary metabolite providing antioxidant roles in plants. It belongs to the subgroup of polyphenols called flavonoids. The name of the catechin chemical family derives from ''catechu'', which is the tannic ... or proanthocyanidins. References Staining {{cell-biology-stub ...
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Ascophyllum Nodosum
''Ascophyllum nodosum'' is a large, common cold water seaweed or brown alga (Phaeophyceae) in the family Fucaceae, being the only species in the genus ''Ascophyllum''. It is a seaweed that only grows in the northern Atlantic Ocean, also known in localities as feamainn bhuí, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack. It is common on the north-western coast of Europe (from the White Sea to Portugal) including east Greenland and the north-eastern coast of North America, its range further south of these latitudes being limited by warmer ocean waters. Description ''Ascophyllum nodosum'' has long tough and leathery fronds,Bunker, F.StP., Maggs, C.A., Brodie, J.A. and Bunker, J.A. 2017. ''Seaweeds of Britain and Ireland.'' Second Edition. Wild Nature Press, Plymouth, UK. irregularly dichotomously branched fronds with large, egg-shaped air bladders set in series at regular intervals along the fronds and not stalked. The fronds can reach 2 m in length and a ...
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Tetrafucol A
Tetrafucol A is a fucol-type phlorotannin found in the brown algae ''Ascophyllum nodosum'', ''Analipus japonicus'' and ''Scytothamnus australis ''Scytothamnus australis'' is a brown alga species in the genus ''Scytothamnus'' found in New Zealand. It is a sulphated polysaccharide and the type species in the genus. The species contains the phlorotannins trifucol, tetrafucol A, tetrafuco ...''. In ''A. japonicus'', 5'-bromo- and 5'-chlorotetrafucol-A can also be detected. References Phlorotannins Natural phenol tetramers {{aromatic-stub ...
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Eckol
Eckol is a phlorotannin isolated from brown algae in the family Lessoniaceae such as species in the genus ''Ecklonia'' such as '' E. cava'' or '' E. kurome'' or in the genus '' Eisenia'' such as ''Eisenia bicyclis''. The molecule possesses a dibenzo-''p''-dioxin skeleton and a phloroglucinol component. The molecule can also be viewed as a phloroglucinol trimer. It exhibits an antiplasmin inhibitory effect and a radioprotective effect in a mouse model. It also exhibits an ''in vitro'' cytoprotective effect against oxidative stress in Chinese hamster lung fibroblasts. It also shows antithrombotic and profibrinolytic Fibrinolysis is a process that prevents blood clots from growing and becoming problematic. Primary fibrinolysis is a normal body process, while secondary fibrinolysis is the breakdown of clots due to a medicine, a medical disorder, or some other ... activities. References {{phlorotannin Phlorotannins Dibenzodioxins ...
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Cell Wall
A cell wall is a structural layer surrounding some types of cells, just outside the cell membrane. It can be tough, flexible, and sometimes rigid. It provides the cell with both structural support and protection, and also acts as a filtering mechanism. Cell walls are absent in many eukaryotes, including animals, but are present in some other ones like fungi, algae and plants, and in most prokaryotes (except mollicute bacteria). A major function is to act as pressure vessels, preventing over-expansion of the cell when water enters. The composition of cell walls varies between taxonomic group and species and may depend on cell type and developmental stage. The primary cell wall of land plants is composed of the polysaccharides cellulose, hemicelluloses and pectin. Often, other polymers such as lignin, suberin or cutin are anchored to or embedded in plant cell walls. Algae possess cell walls made of glycoproteins and polysaccharides such as carrageenan and agar that are absent ...
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Phloroglucinol
Phloroglucinol is an organic compound with the formula C6H3(OH)3. It is a colorless solid. It is used in the synthesis of pharmaceuticals and explosives. Phloroglucinol is one of three isomeric benzenetriols. The other two isomers are hydroxyquinol (1,2,4-benzenetriol) and pyrogallol (1,2,3-benzenetriol). Phloroglucinol, and its benzenetriol isomers, are still defined as "phenols" according to the IUPAC official nomenclature rules of chemical compounds. Many such monophenolics are often termed "polyphenols" by the cosmetic and parapharmaceutical industries, which does not match the scientifically accepted definition. Synthesis and occurrence In 1855, phloroglucinol was first prepared from phloretin by the Austrian chemist Heinrich Hlasiwetz (1825–1875). A modern synthesis of involves hydrolysis of benzene-1,3,5-triamine and its derivatives. Representative is the following route from trinitrobenzene. : The synthesis is noteworthy because ordinary aniline derivatives are unre ...
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Extraction (chemistry)
Extraction in chemistry is a separation process consisting of the separation of a substance from a matrix. Common examples include '' liquid-liquid extraction'', and ''solid phase extraction''. The distribution of a solute between two phases is an equilibrium condition described by partition theory. This is based on exactly how the analyte moves from the initial solvent into the extracting solvent. The term ''washing'' may also be used to refer to an extraction in which impurities are extracted from the solvent containing the desired compound. Types of extraction * Liquid–liquid extraction * Solid-phase extraction * Acid-base extraction * Supercritical fluid extraction * Ultrasound-assisted extraction * Heat reflux extraction * Mechanochemical-assisted extraction * Maceration * Microwave-assisted extraction * Instant controlled pressure drop extraction (DIC, from the French, Détente instantanée contrôlée) * Perstraction Laboratory applications and examples Liquid ...
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Osmium Tetroxide
Osmium tetroxide (also osmium(VIII) oxide) is the chemical compound with the formula OsO4. The compound is noteworthy for its many uses, despite its toxicity and the rarity of osmium. It also has a number of unusual properties, one being that the solid is volatile. The compound is colourless, but most samples appear yellow. This is most likely due to the presence of the impurity OsO2, which is yellow-brown in colour. In biology, its property of binding to lipids has made it a widely-used stain in electron microscopy. Physical properties Osmium(VIII) oxide forms monoclinic crystals. It has a characteristic acrid chlorine-like odor. The element name osmium is derived from ''osme'', Greek for ''odor''. OsO4 is volatile: it sublimes at room temperature. It is soluble in a wide range of organic solvents. It is also moderately soluble in water, with which it reacts reversibly to form osmic acid (see below). ''Pure'' osmium(VIII) oxide is probably colourless and it has been sugg ...
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Uranyl Acetate
Uranyl acetate is the acetate salt of uranium oxide, a toxic yellow-green powder useful in certain laboratory tests. Structurally, it is a coordination polymer with formula UO2(CH3CO2)2(H2O)·H2O. Structure In the polymer, uranyl (UO22+) centers are bridged by acetate ligands. The remainder of each (heptacoordinate) coordination sphere is provided by an aquo ligand and a bidentate acetate ligand. One water of crystallization occupies the lattice. Uses Uranyl acetate is extensively used as a negative stain in electron microscopy."Negative Staining"
University of Oxford
Most procedures in electron microscopy for biology require the use of uranyl acetate. Negative staining protocols typically treat the sample with 1% to 5% aqueous solution. Uranyl acetate staining is simple and q ...
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Lead Citrate
Lead citrate is a compound of lead and citrate that is primarily used as an enhancer for heavy metal staining in electron microscopy. It binds to osmium and uranyl acetate Uranyl acetate is the acetate salt of uranium oxide, a toxic yellow-green powder useful in certain laboratory tests. Structurally, it is a coordination polymer with formula UO2(CH3CO2)2(H2O)·H2O. Structure In the polymer, uranyl (UO22+) c ... and enhances contrast in many cellular structures. Lead citrate is highly reactive with carbon dioxide. References {{reflist Lead compounds Citrates ...
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Pyridine
Pyridine is a basic heterocyclic organic compound with the chemical formula . It is structurally related to benzene, with one methine group replaced by a nitrogen atom. It is a highly flammable, weakly alkaline, water-miscible liquid with a distinctive, unpleasant fish-like smell. Pyridine is colorless, but older or impure samples can appear yellow, due to the formation of extended, unsaturated polymeric chains, which show significant electrical conductivity. The pyridine ring occurs in many important compounds, including agrochemicals, pharmaceuticals, and vitamins. Historically, pyridine was produced from coal tar. As of 2016, it is synthesized on the scale of about 20,000 tons per year worldwide. Properties Physical properties The molecular electric dipole moment is 2.2 debyes. Pyridine is diamagnetic and has a diamagnetic susceptibility of −48.7 × 10−6 cm3·mol−1. The standard enthalpy of formation is 100.2 kJ·mol−1 in the liquid phase ...
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Acetic Anhydride
Acetic anhydride, or ethanoic anhydride, is the chemical compound with the formula (CH3CO)2O. Commonly abbreviated Ac2O, it is the simplest isolable anhydride of a carboxylic acid and is widely used as a reagent in organic synthesis. It is a colorless liquid that smells strongly of acetic acid, which is formed by its reaction with moisture in the air. Structure and properties Acetic anhydride, like most acid anhydrides, is a flexible molecule with a nonplanar structure. The pi system linkage through the central oxygen offers very weak resonance stabilization compared to the dipole-dipole repulsion between the two carbonyl oxygens. The energy barriers to bond rotation between each of the optimal aplanar conformations are quite low. Like most acid anhydrides, the carbonyl carbon atom of acetic anhydride has electrophilic character, as the leaving group is carboxylate. The internal asymmetry may contribute to acetic anhydride's potent electrophilicity as the asymmetric geometry ...
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