Neutrophile
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Neutrophile
A neutrophile is a neutrophilic organism that thrives in a neutral pH environment between 6.5 and 7.5. Environment The pH of the environment can support growth or hinder neutrophilic organisms. When the pH is within the microbe's range, they grow and within that range there is an optimal growth pH. Neutrophiles are adapted to live in an environment where the hydrogen ion concentration is at equilibrium. They are sensitive to the concentration, and when the pH become too basic or acidic, the cell's proteins can denature. Depending on the microbe and the pH, the microbe's growth can be slowed or stopped altogether. Manipulation of the pH of the environment that the microbe is in is used by the food industry to control its growth in order to increase the shelf life of food. See also * Acidophile * Acidophobe * Alkaliphile * Extremophile * Mesophile A mesophile is an organism that grows best in moderate temperature, neither too hot nor too cold, with an optimum growth range f ...
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Alkaliphile
Alkaliphiles are a class of extremophilic microbes capable of survival in alkaline ( pH roughly 8.5–11) environments, growing optimally around a pH of 10. These bacteria can be further categorized as obligate alkaliphiles (those that require high pH to survive), facultative alkaliphiles (those able to survive in high pH, but also grow under normal conditions) and haloalkaliphiles (those that require high salt content to survive).HORIKOSHI, KOKI. "Alkaliphiles: Some Applications of Their Products for Biotechnology." MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 63.4 (1999): 735-50. Print. Background information Microbial growth in alkaline conditions presents several complications to normal biochemical activity and reproduction, as high pH is detrimental to normal cellular processes. For example, alkalinity can lead to denaturation of DNA, instability of the plasma membrane and inactivation of cytosolic enzymes, as well as other unfavorable physiological changes.Higashibata, Akira, ...
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Escherichia Coli
''Escherichia coli'' (),Wells, J. C. (2000) Longman Pronunciation Dictionary. Harlow ngland Pearson Education Ltd. also known as ''E. coli'' (), is a Gram-negative, facultative anaerobic, rod-shaped, coliform bacterium of the genus ''Escherichia'' that is commonly found in the lower intestine of warm-blooded organisms. Most ''E. coli'' strains are harmless, but some serotypes ( EPEC, ETEC etc.) can cause serious food poisoning in their hosts, and are occasionally responsible for food contamination incidents that prompt product recalls. Most strains do not cause disease in humans and are part of the normal microbiota of the gut; such strains are harmless or even beneficial to humans (although these strains tend to be less studied than the pathogenic ones). For example, some strains of ''E. coli'' benefit their hosts by producing vitamin K2 or by preventing the colonization of the intestine by pathogenic bacteria. These mutually beneficial relationships between ''E. col ...
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Organism
In biology, an organism () is any living system that functions as an individual entity. All organisms are composed of cells (cell theory). Organisms are classified by taxonomy into groups such as multicellular animals, plants, and fungi; or unicellular microorganisms such as protists, bacteria, and archaea. All types of organisms are capable of reproduction, growth and development, maintenance, and some degree of response to stimuli. Beetles, squids, tetrapods, mushrooms, and vascular plants are examples of multicellular organisms that differentiate specialized tissues and organs during development. A unicellular organism may be either a prokaryote or a eukaryote. Prokaryotes are represented by two separate domains – bacteria and archaea. Eukaryotic organisms are characterized by the presence of a membrane-bound cell nucleus and contain additional membrane-bound compartments called organelles (such as mitochondria in animals and plants ...
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Denaturation (biochemistry)
In biochemistry, denaturation is a process in which proteins or nucleic acids lose the quaternary structure, tertiary structure, and secondary structure which is present in their native state, by application of some external stress or compound such as a strong acid or base, a concentrated inorganic salt, an organic solvent (e.g., alcohol or chloroform), agitation and radiation or heat. If proteins in a living cell are denatured, this results in disruption of cell activity and possibly cell death. Protein denaturation is also a consequence of cell death. Denatured proteins can exhibit a wide range of characteristics, from conformational change and loss of solubility to aggregation due to the exposure of hydrophobic groups. The loss of solubility as a result of denaturation is called ''coagulation''. Denatured proteins lose their 3D structure and therefore cannot function. Protein folding is key to whether a globular or membrane protein can do its job correctly; it must be ...
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Shelf Life
Shelf life is the length of time that a commodity may be stored without becoming unfit for use, consumption, or sale. In other words, it might refer to whether a commodity should no longer be on a pantry shelf (unfit for use), or no longer on a supermarket shelf (unfit for sale, but not yet unfit for use). It applies to cosmetics, foods and beverages, medical devices, medicines, explosives, pharmaceutical drugs, chemicals, tyres, batteries, and many other perishable items. In some regions, an advisory ''best before'', mandatory ''use by'' or ''freshness date'' is required on packaged perishable foods. The concept of expiration date is related but legally distinct in some jurisdictions. Background Shelf life is the recommended maximum time for which products or fresh (harvested) produce can be stored, during which the defined quality of a specified proportion of the goods remains acceptable under expected (or specified) conditions of distribution, storage and display. Accordi ...
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Acidophile (organisms)
Acidophiles or acidophilic organisms are those that thrive under highly acidic conditions (usually at pH 5.0 or below). These organisms can be found in different branches of the tree of life, including Archaea, Bacteria,Becker, A.Types of Bacteria Living in Acidic pH" Retrieved 10 May 2017. and Eukarya. Examples A list of these organisms includes: Archaea :* Sulfolobales, an order in the Thermoproteota branch of Archaea :* Thermoplasmatales, an order in the Euryarchaeota branch of Archaea :* ARMAN, in the Euryarchaeota branch of Archaea :* ''Acidianus brierleyi, A. infernus'', facultatively anaerobic thermoacidophilic archaebacteria :* '' Halarchaeum acidiphilum'', acidophilic member of the Halobacteriacaeae :* ''Metallosphaera sedula'', thermoacidophilic Bacteria :* Acidobacteriota, a phylum of Bacteria :* Acidithiobacillales, an order of Pseudomonadota e.g. ''A. ferrooxidans, A. thiooxidans'' :*''Thiobacillus prosperus, T. acidophilus, T. organovorus, T. cuprinus'' :*'' ...
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Acidophobe
An acidophobe is an organism that is intolerant of acidic environments. The terms acidophobia, acidophoby and acidophobic are also used. The term ''acidophobe'' is variously applied to plants, bacteria, protozoa, animals, chemical compounds, etc. The antonymous term is ''acidophile.'' Plants are known to be well-defined with respect to their pH tolerance, and only a small number of species thrive well under a broad range of acidity. Therefore the categorization acidophile/acidophobe is well-defined. Sometimes a complementary classification is used (calcicole/calcifuge, with calcicoles being "lime-loving" plants). In gardening, soil pH is a measure of acidity or alkalinity of soil, with pH = 7 indicating the neutral soil. Therefore acydophobes would prefer pH above 7. Acid intolerance of plants may be mitigated by lime addition and by calcium and nitrogen fertilizers. Acidophobic species are used as a natural instrument of monitoring the degree of acidifying contamination of soil an ...
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Extremophile
An extremophile (from Latin ' meaning "extreme" and Greek ' () meaning "love") is an organism that is able to live (or in some cases thrive) in extreme environments, i.e. environments that make survival challenging such as due to extreme temperature, radiation, salinity, or pH level. These organisms are ecologically dominant in the evolutionary history of the planet. Some spores and cocooned bacteria samples have been dormant for more than 40 million years, extremophiles have continued to thrive in the most extreme conditions, making them one of the most abundant lifeforms. Characteristics In the 1980s and 1990s, biologists found that microbial life has great flexibility for surviving in extreme environments—niches that are acidic, extraordinarily hot or within irregular air pressure for example—that would be completely inhospitable to complex organisms. Some scientists even concluded that life may have begun on Earth in hydrothermal vents far under the ocean's surfa ...
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Mesophile
A mesophile is an organism that grows best in moderate temperature, neither too hot nor too cold, with an optimum growth range from . The optimum growth temperature for these organisms is 37°C. The term is mainly applied to microorganisms. Organisms that prefer extreme environments are known as extremophiles. Mesophiles have diverse classifications, belonging to two domains: Bacteria, Archaea, and to kingdom Fungi of domain Eucarya. Mesophiles belonging to the domain Bacteria can either be gram-positive or gram-negative. Oxygen requirements for mesophiles can be aerobic or anaerobic. There are three basic shapes of mesophiles: coccus, bacillus, and spiral. Habitat The habitats of mesophiles can include cheese and yogurt. They are often included during fermentation of beer and wine making. Since normal human body temperature is 37 °C, the majority of human pathogens are mesophiles, as are most of the organisms comprising the human microbiome. Mesophiles vs. extremophiles Meso ...
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