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Maleate Isomerase
In enzymology, a maleate isomerase (), or maleate cis-tran isomerase, is a member of the Asp/Glu Epimerase and racemase, racemase superfamily discovered in bacteria. It is responsible for catalyzing Cis–trans isomerism, cis-trans isomerization of the C2-C3 double bond in Maleic acid, maleate to produce Fumaric acid, fumarate, which is a critical intermediate in citric acid cycle. The presence of an exogenous mercaptan is required for catalysis to happen. : Maleate isomerase participates in butanoate metabolism and nicotinate and nicotinamide metabolism. It is an essential enzyme for the last step of metabolic degradation pathway of nicotinic acid. Recently, maleate isomerase has been an industrial target for degradation of tobacco waste. It is also got attention for its involvement in aspartic acid and maleic acid production. Maleate isomerase has been utilized by multiple bacteria species, including Pseudomonas fluorescens, ''Pseudomonas fluorescens'', ''Alcaligenes faecalis'' ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Enzymology
Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrates, and the enzyme converts the substrates into different molecules known as products. Almost all metabolic processes in the cell need enzyme catalysis in order to occur at rates fast enough to sustain life. Metabolic pathways depend upon enzymes to catalyze individual steps. The study of enzymes is called ''enzymology'' and the field of pseudoenzyme analysis recognizes that during evolution, some enzymes have lost the ability to carry out biological catalysis, which is often reflected in their amino acid sequences and unusual 'pseudocatalytic' properties. Enzymes are known to catalyze more than 5,000 biochemical reaction types. Other biocatalysts are catalytic RNA molecules, called ribozymes. Enzymes' specificity comes from their unique three-dimensional structures. Like all catalysts, enzymes increase the reaction ra ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bacillus Stearothermophilus
''Geobacillus stearothermophilus'' (previously ''Bacillus stearothermophilus'') is a rod-shaped, Gram-positive bacterium and a member of the phylum Bacillota. The bacterium is a thermophile and is widely distributed in soil, hot springs, ocean sediment, and is a cause of spoilage in food products. It will grow within a temperature range of 30 to 75 °C. Some strains are capable of oxidizing carbon monoxide aerobically. It is commonly used as a challenge organism for sterilization validation studies and periodic check of sterilization cycles. The biological indicator contains spores of the organism on filter paper inside a vial. After sterilizing, the cap is closed, an ampule of growth medium inside of the vial is crushed and the whole vial is incubated. A color and/or turbidity change indicates the results of the sterilization process; no change indicates that the sterilization conditions were achieved, otherwise the growth of the spores indicates that the sterilization ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Pseudomonas Alcaligenes
''Pseudomonas alcaligenes'' is a Gram-negative aerobic bacterium used for bioremediation purposes of oil pollution, pesticide substances, and certain chemical substances, as it can degrade polycyclic aromatic hydrocarbons. It can be a human pathogen, but occurrences are very rare. Based on 16S rRNA Ribosomal ribonucleic acid (rRNA) is a type of non-coding RNA which is the primary component of ribosomes, essential to all cells. rRNA is a ribozyme which carries out protein synthesis in ribosomes. Ribosomal RNA is transcribed from ribosoma ... analysis, ''P. alcaligenes'' has been placed in the '' P. aeruginosa'' group. References External linksType strain of ''Pseudomonas alcaligenes'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Pseudomonadales Bacteria described in 1928 {{Pseudomonadales-stub ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Bacillus Sporothermodurans
''Bacillus sporothermodurans'' is a species of bacteria notable for producing highly heat-resistant endospores, hence its name. It is strictly aerobic. Its type strain is M215 (DSMZ 10599). This species has been recently transferred into the genus ''Heyndrickxia ''Heyndrickxia'' is a genus of gram-positive rod-shaped bacteria (except for ''Heyndrickxia'' ''sporothermodurans'', which stains gram-negative) in the family ''Bacillaceae'' within the order ''Bacillales''. The type species for this genus is '' ...''. The correct nomenclature is ''Heyndrickxia sporothermodurans.'' References Further reading * * * * External links *Type strain of ''Bacillus sporothermodurans'' at Bac''Dive'' - the Bacterial Diversity Metadatabase sporothermodurans Bacteria described in 1996 {{bacilli-stub ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Brevibacillus Brevis
''Brevibacillus brevis'' (formerly known as ''Bacillus brevis'') is a Gram-positive, Aerobic organism, aerobic, motile, spore-forming, bacillus, rod-shaped bacterium commonly found in soil, air, water, and decaying matter. It is rarely associated with infectious diseases. The antibiotics gramicidin and tyrocidine were first isolated from it.Abedon, Stephen. "Bacteria Binomials." 26 Apr 1998. Ohio State University. 17 Jun 2006 . ''Brevibacillus brevis'' is catalase positive, amylase negative, casein negative, gelatinase positive, and indole negative; most strains are citric acid cycle, citrate users. Some strains are capable of oxidizing carbon monoxide aerobically. Optimal growth occurs at 35 °C to 55 °C. References [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Maleic Anhydride
Maleic anhydride is an organic compound with the formula C2H2(CO)2O. It is the acid anhydride of maleic acid. It is a colorless or white solid with an acrid odor. It is produced industrially on a large scale for applications in coatings and polymers. Production Maleic anhydride is produced by vapor-phase oxidation of ''n''-butane. The overall process converts the methyl groups to carboxylate and dehydrogenates the backbone. The selectivity of the process reflects the robustness of maleic anhydride, with its conjugated double-bond system. Traditionally maleic anhydride was produced by the oxidation of benzene or other aromatic compounds. As of 2006, only a few smaller plants continue to use benzene. In both cases, benzene and butane are fed into a stream of hot air, and the mixture is passed through a catalyst bed at high temperature. The ratio of air to hydrocarbon is controlled to prevent the mixture from igniting. Vanadium pentoxide and molybdenum trioxide are the catalysts ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Esterification
In chemistry, an ester is a compound derived from an oxoacid (organic or inorganic) in which at least one hydroxyl group () is replaced by an alkoxy group (), as in the substitution reaction of a carboxylic acid and an alcohol. Glycerides are fatty acid esters of glycerol; they are important in biology, being one of the main classes of lipids and comprising the bulk of animal fats and vegetable oils. Esters typically have a pleasant smell; those of low molecular weight are commonly used as fragrances and are found in essential oils and pheromones. They perform as high-grade solvents for a broad array of plastics, plasticizers, resins, and lacquers, and are one of the largest classes of synthetic lubricants on the commercial market. Polyesters are important plastics, with monomers linked by ester moieties. Phosphoesters form the backbone of DNA molecules. Nitrate esters, such as nitroglycerin, are known for their explosive properties. '' Nomenclature Etymology The ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Polymerization
In polymer chemistry, polymerization (American English), or polymerisation (British English), is a process of reacting monomer, monomer molecules together in a chemical reaction to form polymer chains or three-dimensional networks. There are many forms of polymerization and different systems exist to categorize them. In chemical compounds, polymerization can occur via a variety of reaction mechanisms that vary in complexity due to the functional groups present in the reactants and their inherent steric effects. In more straightforward polymerizations, alkenes form polymers through relatively simple free-radical reaction, radical reactions; in contrast, reactions involving substitution at a carbonyl group require more complex synthesis due to the way in which reactants polymerize. Alkanes can also be polymerized, but only with the help of strong acids. As alkenes can polymerize in somewhat straightforward radical reactions, they form useful compounds such as polyethylene and p ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Maleate Isomerase Mechanism
Maleic acid or ''cis''-butenedioic acid is an organic compound that is a dicarboxylic acid, a molecule with two carboxyl groups. Its chemical formula is HO2CCH=CHCO2H. Maleic acid is the ''cis''-isomer of butenedioic acid, whereas fumaric acid is the ''trans''-isomer. It is mainly used as a precursor to fumaric acid, and relative to its parent maleic anhydride, maleic acid has few applications. Physical properties Maleic acid has a ''heat of combustion'' of -1,355 kJ/mol., 22.7 kJ/mol higher than that of fumaric acid. Maleic acid is more soluble in water than fumaric acid. The melting point of maleic acid (135 °C) is also much lower than that of fumaric acid (287 °C). Both properties of maleic acid can be explained on account of the intramolecular hydrogen bonding that takes place in maleic acid at the expense of intermolecular interactions, and that are not possible in fumaric acid for geometric reasons. Production and industrial applications In industry ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Protomer
In structural biology, a protomer is the structural unit of an oligomeric protein. It is the smallest unit composed of at least two different protein chains that form a larger hetero-oligomer by association of two or more copies of this unit. The term was introduced by Chetverin to make nomenclature in the Na/K-ATPase enzyme unambiguous. This enzyme is composed of two subunits: a large, catalytic α subunit, and a smaller glycoprotein β subunit (plus a proteolipid, called γ-subunit). At the time it was unclear how many of each work together. In addition, when people spoke of a dimer, it was unclear whether they were referring to αβ or to (αβ)2. Chetverin suggested to call αβ a protomer and (αβ)2 a diprotomer. Protomers usually arrange in cyclic symmetry to form closed point group symmetries. In chemistry, a so-called protomer is a molecule which displays tautomerism due to position of a proton. Examples Hemoglobin is a heterotetramer consisting of four subunits (two α ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Nocardia Farcinica
Nocardia farcinica is a species of bacteria, once thought to be associated with farcy, and a member of the genus '' Nocardia''. This species is very similar in phenotype to ''Nocardia asteroides'', to the degree that some isolates of ''N. asteroides'' were later found to be ''Nocardia farcinica''. Pathogenicity ''N. farcinica'' may be a causative agent of nocardiosis or of secondary infections in immunocompromised patients. Strains of this species have been isolated from human brain abscesses. Genome ''N. farcinica'' contains a 6 million base pair genome with an average GC content of 70.8%. A sequenced strain, IFM 10152, is also known to contain two plasmids, pNF1 pNF2. The chromosome encodes 5,674 potential protein-coding open reading frame In molecular biology, open reading frames (ORFs) are defined as spans of DNA sequence between the start and stop codons. Usually, this is considered within a studied region of a prokaryotic DNA sequence, where only one of the six pos ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
Pseudomonas Putida
''Pseudomonas putida'' is a Gram-negative, rod-shaped, saprotrophic soil bacterium. Based on 16S rRNA analysis, ''P. putida'' was taxonomically confirmed to be a ''Pseudomonas'' species (''sensu stricto'') and placed, along with several other species, in the ''P. putida'' group, to which it lends its name. However, phylogenomic analysis of complete genomes from the entire ''Pseudomonas'' genus clearly showed that the genomes that were named as ''P. putida'' did not form a monophyletic clade, but were dispersed and formed a wider evolutionary group (the putida group) that included other species as well, such as ''P. alkylphenolia, P. alloputida, P. monteilii, P. cremoricolorata, P. fulva, P. parafulva, P. entomophila, P. mosselii, P. plecoglossicida'' and several genomic species (new species which are currentely not validely defined as new species. A variety of ''P. putida'', called multiplasmid hydrocarbon-degrading ''Pseudomonas'', is the first patented organism in th ... [...More Info...] [...Related Items...] OR: [Wikipedia] [Google] [Baidu] |
