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K-medoids
The -medoids problem is a clustering problem similar to -means. The name was coined by Leonard Kaufman and Peter J. Rousseeuw with their PAM algorithm. Both the -means and -medoids algorithms are partitional (breaking the dataset up into groups) and attempt to minimize the distance between points labeled to be in a cluster and a point designated as the center of that cluster. In contrast to the -means algorithm, -medoids chooses actual data points as centers (medoids or exemplars), and thereby allows for greater interpretability of the cluster centers than in -means, where the center of a cluster is not necessarily one of the input data points (it is the average between the points in the cluster). Furthermore, -medoids can be used with arbitrary dissimilarity measures, whereas -means generally requires Euclidean distance for efficient solutions. Because -medoids minimizes a sum of pairwise dissimilarities instead of a sum of squared Euclidean distances, it is more robust to nois ...
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K-means
''k''-means clustering is a method of vector quantization, originally from signal processing, that aims to partition ''n'' observations into ''k'' clusters in which each observation belongs to the cluster with the nearest mean (cluster centers or cluster centroid), serving as a prototype of the cluster. This results in a partitioning of the data space into Voronoi cells. ''k''-means clustering minimizes within-cluster variances ( squared Euclidean distances), but not regular Euclidean distances, which would be the more difficult Weber problem: the mean optimizes squared errors, whereas only the geometric median minimizes Euclidean distances. For instance, better Euclidean solutions can be found using k-medians and k-medoids. The problem is computationally difficult (NP-hard); however, efficient heuristic algorithms converge quickly to a local optimum. These are usually similar to the expectation-maximization algorithm for mixtures of Gaussian distributions via an iterative ...
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ELKI
ELKI (for ''Environment for DeveLoping KDD-Applications Supported by Index-Structures'') is a data mining (KDD, knowledge discovery in databases) software framework developed for use in research and teaching. It was originally at the database systems research unit of Professor Hans-Peter Kriegel at the Ludwig Maximilian University of Munich, Germany, and now continued at the Technical University of Dortmund, Germany. It aims at allowing the development and evaluation of advanced data mining algorithms and their interaction with database index structures. Description The ELKI framework is written in Java and built around a modular architecture. Most currently included algorithms belong to clustering, outlier detection and database indexes. The object-oriented architecture allows the combination of arbitrary algorithms, data types, distance functions, indexes, and evaluation measures. The Java just-in-time compiler optimizes all combinations to a similar extent, making benc ...
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Data Clustering
Cluster analysis or clustering is the task of grouping a set of objects in such a way that objects in the same group (called a cluster) are more similar (in some sense) to each other than to those in other groups (clusters). It is a main task of exploratory data analysis, and a common technique for statistical data analysis, used in many fields, including pattern recognition, image analysis, information retrieval, bioinformatics, data compression, computer graphics and machine learning. Cluster analysis itself is not one specific algorithm, but the general task to be solved. It can be achieved by various algorithms that differ significantly in their understanding of what constitutes a cluster and how to efficiently find them. Popular notions of clusters include groups with small distances between cluster members, dense areas of the data space, intervals or particular statistical distributions. Clustering can therefore be formulated as a multi-objective optimization problem. The ...
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K-Medoids Clustering
The -medoids problem is a clustering problem similar to -means. The name was coined by Leonard Kaufman and Peter J. Rousseeuw with their PAM algorithm. Both the -means and -medoids algorithms are partitional (breaking the dataset up into groups) and attempt to minimize the distance between points labeled to be in a cluster and a point designated as the center of that cluster. In contrast to the -means algorithm, -medoids chooses actual data points as centers (medoids or exemplars), and thereby allows for greater interpretability of the cluster centers than in -means, where the center of a cluster is not necessarily one of the input data points (it is the average between the points in the cluster). Furthermore, -medoids can be used with arbitrary dissimilarity measures, whereas -means generally requires Euclidean distance for efficient solutions. Because -medoids minimizes a sum of pairwise dissimilarities instead of a sum of squared Euclidean distances, it is more robust to nois ...
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Rust (programming Language)
Rust is a multi-paradigm, general-purpose programming language. Rust emphasizes performance, type safety, and concurrency. Rust enforces memory safety—that is, that all references point to valid memory—without requiring the use of a garbage collector or reference counting present in other memory-safe languages. To simultaneously enforce memory safety and prevent concurrent data races, Rust's "borrow checker" tracks the object lifetime of all references in a program during compilation. Rust is popular for systems programming but also offers high-level features including some functional programming constructs. Software developer Graydon Hoare created Rust as a personal project while working at Mozilla Research in 2006. Mozilla officially sponsored the project in 2009. Since the first stable release in May 2015, Rust has been adopted by companies including Amazon, Discord, Dropbox, Facebook ( Meta), Google (Alphabet), and Microsoft. Rust has been noted for its growth as ...
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RapidMiner
RapidMiner is a data science platform designed for enterprises that analyses the collective impact of organizations’ employees, expertise and data. Rapid Miner's data science platform is intended to support many analytics users across a broad AI lifecycle. It was acquired by Altair Engineering in September 2022. History RapidMiner, formerly known as YALE (Yet Another Learning Environment), was developed starting in 2001 by Ralf Klingenberg, Ingo Mierswa, and Simon Fischer at the Artificial Intelligence Unit of the Technical University of Dortmund. Starting in 2006, its development was driven by Rapid-I, a company founded by Ingo Mierswa and Ralf Klinkenberg in the same year. In 2007, the name of the software was changed from YALE to RapidMiner. In 2013, the company rebranded from Rapid-I to RapidMiner. Description RapidMiner uses a client/server model with the server offered either on-premises or in public or private cloud infrastructures. According to Bloor Research, Rapid ...
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R (programming Language)
R is a programming language for statistical computing and graphics supported by the R Core Team and the R Foundation for Statistical Computing. Created by statisticians Ross Ihaka and Robert Gentleman, R is used among data miners, bioinformaticians and statisticians for data analysis and developing statistical software. Users have created packages to augment the functions of the R language. According to user surveys and studies of scholarly literature databases, R is one of the most commonly used programming languages used in data mining. R ranks 12th in the TIOBE index, a measure of programming language popularity, in which the language peaked in 8th place in August 2020. The official R software environment is an open-source free software environment within the GNU package, available under the GNU General Public License. It is written primarily in C, Fortran, and R itself (partially self-hosting). Precompiled executables are provided for various operating systems. R ...
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Python (programming Language)
Python is a high-level, general-purpose programming language. Its design philosophy emphasizes code readability with the use of significant indentation. Python is dynamically-typed and garbage-collected. It supports multiple programming paradigms, including structured (particularly procedural), object-oriented and functional programming. It is often described as a "batteries included" language due to its comprehensive standard library. Guido van Rossum began working on Python in the late 1980s as a successor to the ABC programming language and first released it in 1991 as Python 0.9.0. Python 2.0 was released in 2000 and introduced new features such as list comprehensions, cycle-detecting garbage collection, reference counting, and Unicode support. Python 3.0, released in 2008, was a major revision that is not completely backward-compatible with earlier versions. Python 2 was discontinued with version 2.7.18 in 2020. Python consistently ranks as ...
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KNIME
KNIME (), the Konstanz Information Miner, is a free and open-source data analytics, reporting and integration platform. KNIME integrates various components for machine learning and data mining through its modular data pipelining "Building Blocks of Analytics" concept. A graphical user interface and use of JDBC allows assembly of nodes blending different data sources, including preprocessing ( ETL: Extraction, Transformation, Loading), for modeling, data analysis and visualization without, or with only minimal, programming. Since 2006, KNIME has been used in pharmaceutical research, it also used in other areas such as CRM customer data analysis, business intelligence, text mining and financial data analysis. Recently attempts were made to use KNIME as robotic process automation (RPA) tool. KNIME's headquarters are based in Zurich, with additional offices in Konstanz, Berlin, and Austin (USA). History The Development of KNIME was started January 2004 by a team of software enginee ...
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Julia Language
Julia is a high-level, dynamic programming language. Its features are well suited for numerical analysis and computational science. Distinctive aspects of Julia's design include a type system with parametric polymorphism in a dynamic programming language; with multiple dispatch as its core programming paradigm. Julia supports concurrent, (composable) parallel and distributed computing (with or without using MPI or the built-in corresponding to "OpenMP-style" threads), and direct calling of C and Fortran libraries without glue code. Julia uses a just-in-time (JIT) compiler that is referred to as "just- ahead-of-time" (JAOT) in the Julia community, as Julia compiles all code (by default) to machine code before running it. Julia is garbage-collected, uses eager evaluation, and includes efficient libraries for floating-point calculations, linear algebra, random number generation, and regular expression matching. Many libraries are available, including some (e.g., for fast Four ...
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Lloyd's Algorithm
In electrical engineering and computer science, Lloyd's algorithm, also known as Voronoi iteration or relaxation, is an algorithm named after Stuart P. Lloyd for finding evenly spaced sets of points in subsets of Euclidean spaces and partitions of these subsets into well-shaped and uniformly sized convex cells. Like the closely related ''k''-means clustering algorithm, it repeatedly finds the centroid of each set in the partition and then re-partitions the input according to which of these centroids is closest. In this setting, the mean operation is an integral over a region of space, and the nearest centroid operation results in Voronoi diagrams. Although the algorithm may be applied most directly to the Euclidean plane, similar algorithms may also be applied to higher-dimensional spaces or to spaces with other non-Euclidean metrics. Lloyd's algorithm can be used to construct close approximations to centroidal Voronoi tessellations of the input, which can be used for quantizati ...
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Hierarchical Clustering
In data mining and statistics, hierarchical clustering (also called hierarchical cluster analysis or HCA) is a method of cluster analysis that seeks to build a hierarchy of clusters. Strategies for hierarchical clustering generally fall into two categories: * Agglomerative: This is a " bottom-up" approach: Each observation starts in its own cluster, and pairs of clusters are merged as one moves up the hierarchy. * Divisive: This is a "top-down" approach: All observations start in one cluster, and splits are performed recursively as one moves down the hierarchy. In general, the merges and splits are determined in a greedy manner. The results of hierarchical clustering are usually presented in a dendrogram. The standard algorithm for hierarchical agglomerative clustering (HAC) has a time complexity of \mathcal(n^3) and requires \Omega(n^2) memory, which makes it too slow for even medium data sets. However, for some special cases, optimal efficient agglomerative methods (of c ...
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