Filamentous Phage
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Filamentous Phage
Filamentous bacteriophage is a family of viruses (''Inoviridae'') that infect bacteria. The phages are named for their filamentous shape, a worm-like chain (long, thin and flexible, reminiscent of a length of cooked spaghetti), about 6 nm in diameter and about 1000-2000 nm long. The coat of the virion comprises five types of viral protein, which are located during phage assembly in the inner membrane of the host bacteria, and are added to the nascent virion as it extrudes through the membrane. The simplicity of this family makes it an attractive model system to study fundamental aspects of molecular biology, and it has also proven useful as a tool in immunology and nanotechnology. Characteristics Filamentous bacteriophages are among the simplest living organisms known, with far fewer genes than the classical tailed bacteriophages studied by the phage group. The family contains 29 defined species, divided between 23 genera. However, mining of genomic and metagenomic ...
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Filamentous Bacteriophage Fd
The word filament, which is descended from Latin ''filum'' meaning " thread", is used in English for a variety of thread-like structures, including: Astronomy * Galaxy filament, the largest known cosmic structures in the universe * Solar filament, a solar prominence seen against the disc of the sun Biology * Myofilament, filaments of myofibrils constructed from proteins * Protein filament, a long chain of protein subunits, such as those found in hair or muscle * Part of a stamen, the male part of a flower * Hypha, a thread-like cell in fungi and Actinobacteria * Filamentation, an elongation of individual bacterial cells Textiles * Fiber, natural or manmade substances significantly longer than they are wide * Yarn (more loosely) * Filament fiber, fiber that comes in a continuous long length Media * ''Filament'' (magazine), a female-oriented erotica magazine * 2002 movie by Jinsei Tsuji * Filament (band), a musical group from Japan * Filament Games, a Wisconsin-based educational ...
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Walker Motifs
The Walker A and Walker B motifs are protein sequence motifs, known to have highly conserved three-dimensional structures. These were first reported in ATP-binding proteins by Walker and co-workers in 1982. Of the two motifs, the A motif is the main "P-loop" responsible for binding phosphate, while the B motif is a much less conserved downstream region. The P-loop is best known for its presence in ATP- and GTP-binding proteins, and is also found in a variety of proteins with phosphorylated substrates. Major lineages include: * RecA and rotor ATP synthase / ATPases (α and β subunits). * Nucleic acid-dependent ATPases: helicases, Swi2, and PhoH () * AAA proteins * STAND NTPases including MJ, PH, AP, and NACHT ATPases * ABC- PilT ATPases * Nucleotide kinases () * G domain proteins: G-proteins (transducin), myosin. Walker A motif Walker A motif, also known as the Walker loop, or P-loop, or phosphate-binding loop, is a motif in proteins that is associated with phosphate ...
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Pilus
A pilus (Latin for 'hair'; plural: ''pili'') is a hair-like appendage found on the surface of many bacteria and archaea. The terms ''pilus'' and '' fimbria'' (Latin for 'fringe'; plural: ''fimbriae'') can be used interchangeably, although some researchers reserve the term ''pilus'' for the appendage required for bacterial conjugation. All conjugative pili are primarily composed of pilin – fibrous proteins, which are oligomeric. Dozens of these structures can exist on the bacterial and archaeal surface. Some bacteria, viruses or bacteriophages attach to receptors on pili at the start of their reproductive cycle. Pili are antigenic. They are also fragile and constantly replaced, sometimes with pili of different composition, resulting in altered antigenicity. Specific host responses to old pili structures are not effective on the new structure. Recombination genes of pili code for variable (V) and constant (C) regions of the pili (similar to immunoglobulin diversity). As the ...
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