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Dark Septate Endophytes
Dark septate endophytes (DSE) are a group of endophytic fungi characterized by their morphology of melanized, septate, hyphae. This group is likely paraphyletic, and contain conidial as well as sterile fungi that colonize roots intracellularly or intercellularly.Jumpponen, A. 2001. Dark-Septate Endophytes – are they mycorrhizal? Mycorrhiza 11:207–211.Mandyam, K. and Jumpponen, A. 2005. Seeking the elusive function of the root-colonising dark septate endophytic fungi. Studies in Mycology. 53: 173–189. Very little is known about the number of fungal taxa within this group, but all are in the Ascomycota. They are found in over 600 plant species and across 114 families of angiosperms and gymnosperms and co-occur with other types of mycorrhizal fungi. They have a wide global distribution and can be more abundant in stressed environments. Much of their taxonomy, physiology, and ecology are unknown. Taxonomy Based on analysis of sequences with the small subunit of the nuclear ri ...
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Endophytic
An endophyte is an endosymbiont, often a bacterium or fungus, that lives within a plant for at least part of its life cycle without causing apparent disease. Endophytes are ubiquitous and have been found in all species of plants studied to date; however, most of the endophyte/plant relationships are not well understood. Some endophytes may enhance host growth, nutrient acquisition and improve the plant's ability to tolerate abiotic stresses, such as drought and decrease biotic stresses by enhancing plant resistance to insects, pathogens and herbivores. Although endophytic bacteria and fungi are frequently studied, endophytic archaea are increasingly being considered for their role in plant growth promotion as part of the core microbiome of a plant. History Endophytes were first described by the German botanist Johann Heinrich Friedrich Link in 1809. They were thought to be plant parasitic fungi and they were later termed as "microzymas" by the French scientist Béchamp. There ...
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Eurotiales
The Eurotiales are an order of sac fungi, also known as the green and blue molds. It was circumscribed in 1980. Classification Currently the order Eurotiales contains 5 families, 28 genera and 1280 species: *Family Aspergillaceae Monascaceae.html"_;"title="Monascaceae">Monascaceae_**''Aspergillago.html" ;"title="Monascaceae">Monascaceae_.html" ;"title="Monascaceae.html" ;"title="Monascaceae">Monascaceae ">Monascaceae.html" ;"title="Monascaceae">Monascaceae **''Aspergillago">Monascaceae">Monascaceae_.html" ;"title="Monascaceae.html" ;"title="Monascaceae">Monascaceae ">Monascaceae.html" ;"title="Monascaceae">Monascaceae **''Aspergillago'' – 1 species **''Aspergillus'' – 428 species **''Dichlaena'' – 4 species **''Hamigera (fungus), Hamigera'' – 9 species **''Leiothecium'' – 2 species **''Monascus'' – 38 species **''Penicilliopsis'' – 15 species **''Penicillium'' – 467 species **'' Phialomyces'' – 5 species **'' Pseudohamigera'' – 1 species **'' Pseu ...
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Amylases
An amylase () is an enzyme that catalysis, catalyses the hydrolysis of starch (Latin ') into sugars. Amylase is present in the saliva of humans and some other mammals, where it begins the chemical process of digestion. Foods that contain large amounts of starch but little sugar, such as rice and potatoes, may acquire a slightly sweet taste as they are chewed because amylase degrades some of their starch into sugar. The pancreas and salivary gland make amylase (alpha amylase) to hydrolyse dietary starch into disaccharides and trisaccharides which are converted by other enzymes to glucose to supply the body with energy. Plants and some bacteria also produce amylase. Specific amylase proteins are designated by different Greek letters. All amylases are glycoside hydrolases and act on α-1,4-glycosidic bonds. Classification α-Amylase The α-amylases () (CAS registry number, CAS 9014-71-5) (alternative names: 1,4-α-D-glucan glucanohydrolase; glycogenase) are calcium metalloprote ...
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Lipases
Lipase ( ) is a family of enzymes that catalyzes the hydrolysis of fats. Some lipases display broad substrate scope including esters of cholesterol, phospholipids, and of lipid-soluble vitamins and sphingomyelinases; however, these are usually treated separately from "conventional" lipases. Unlike esterases, which function in water, lipases "are activated only when adsorbed to an oil–water interface". Lipases perform essential roles in digestion, transport and processing of dietary lipids in most, if not all, organisms. Structure and catalytic mechanism Classically, lipases catalyse the hydrolysis of triglycerides: :triglyceride + H2O → fatty acid + diacylglycerol :diacylglycerol + H2O → fatty acid + monacylglycerol :monacylglycerol + H2O → fatty acid + glycerol Lipases are serine hydrolases, i.e. they function by transesterification generating an acyl serine intermediate. Most lipases act at a specific position on the glycerol backbone of a lipid sub ...
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Enzymes
Enzymes () are proteins that act as biological catalysts by accelerating chemical reactions. The molecules upon which enzymes may act are called substrate (chemistry), substrates, and the enzyme converts the substrates into different molecules known as product (chemistry), products. Almost all metabolism, metabolic processes in the cell (biology), cell need enzyme catalysis in order to occur at rates fast enough to sustain life. Metabolic pathways depend upon enzymes to catalyze individual steps. The study of enzymes is called ''enzymology'' and the field of pseudoenzyme, pseudoenzyme analysis recognizes that during evolution, some enzymes have lost the ability to carry out biological catalysis, which is often reflected in their amino acid sequences and unusual 'pseudocatalytic' properties. Enzymes are known to catalyze more than 5,000 biochemical reaction types. Other biocatalysts are Ribozyme, catalytic RNA molecules, called ribozymes. Enzymes' Chemical specificity, specific ...
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Arbuscular Mycorrhizae
An arbuscular mycorrhiza (AM) (plural ''mycorrhizae'', a.k.a. ''endomycorrhiza'') is a type of mycorrhiza in which the symbiont fungus (''AM fungi'', or AMF) penetrates the cortical cells of the roots of a vascular plant forming arbuscules. (Not to be confused with ectomycorrhiza or ericoid mycorrhiza.) Arbuscular mycorrhizae are characterized by the formation of unique structures, arbuscules and vesicles, by Glomeromycota and Mucoromycota, sister clades of the more well-known and diverse dikaryan fungi (all three are together called "symbiomycota"). AM fungi help plants to capture nutrients such as phosphorus, sulfur, nitrogen and micronutrients from the soil. It is believed that the development of the arbuscular mycorrhizal symbiosis played a crucial role in the initial colonisation of land by plants and in the evolution of the vascular plants. It has been said that it is quicker to list the plants that do not form endomycorrhizae than those that do. This symbiosis ...
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Alpine Climate
Alpine climate is the typical weather (climate) for elevations above the tree line, where trees fail to grow due to cold. This climate is also referred to as a mountain climate or highland climate. Definition There are multiple definitions of alpine climate. In the Köppen climate classification, the alpine and mountain climates are part of group ''E'', along with the polar climate, where no month has a mean temperature higher than . According to the Holdridge life zone system, there are two mountain climates which prevent tree growth : a) the alpine climate, which occurs when the mean biotemperature of a location is between . The alpine climate in Holdridge system is roughly equivalent to the warmest tundra climates (ET) in the Köppen system. b) the alvar climate, the coldest mountain climate since the biotemperature is between 0 °C and 1.5 °C (biotemperature can never be below 0 °C). It corresponds more or less to the coldest tundra climates and to the ...
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Tropical Rain Forests
Tropical rainforests are rainforests that occur in areas of tropical rainforest climate in which there is no dry season – all months have an average precipitation of at least 60 mm – and may also be referred to as ''lowland equatorial evergreen rainforest''. True rainforests are typically found between 10 degrees north and south of the equator (see map); they are a sub-set of the tropical forest biome that occurs roughly within the 28-degree latitudes (in the equatorial zone between the Tropic of Cancer and Tropic of Capricorn). Within the World Wildlife Fund's biome classification, tropical rainforests are a type of tropical moist broadleaf forest (or tropical wet forest) that also includes the more extensive seasonal tropical forests. Overview Tropical rainforests are characterized by two words: hot and wet. Mean monthly temperatures exceed during all months of the year. Average annual rainfall is no less than and can exceed although it typically lies between ...
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Temperate Grasslands
Temperate grasslands, savannas, and shrublands is a terrestrial biome defined by the World Wide Fund for Nature. The predominant vegetation in this biome consists of grass and/or shrubs. The climate is temperate and ranges from semi-arid to semi-humid. The habitat type differs from tropical grasslands in the annual temperature regime as well as the types of species found here. The habitat type is known as prairie in North America, pampas in South America, veld in Southern Africa and steppe in Asia. Generally speaking, these regions are devoid of trees, except for riparian or gallery forests associated with streams and rivers. Steppes/shortgrass prairies are short grasslands that occur in semi-arid climates. Tallgrass prairies are tall grasslands in areas of higher rainfall. Heaths and pastures are, respectively, low shrublands and grasslands where forest growth is hindered by human activity but not the climate. Tall grasslands, including the tallgrass prairie of North America, ...
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Boreal Climate
The subarctic climate (also called subpolar climate, or boreal climate) is a climate with long, cold (often very cold) winters, and short, warm to cool summers. It is found on large landmasses, often away from the moderating effects of an ocean, generally at latitudes from 50° to 70°N, poleward of the humid continental climates. Subarctic or boreal climates are the source regions for the cold air that affects temperate latitudes to the south in winter. These climates represent Köppen climate classification ''Dfc'', ''Dwc'', ''Dsc'', ''Dfd'', ''Dwd'' and ''Dsd''. Description This type of climate offers some of the most extreme seasonal temperature variations found on the planet: in winter, temperatures can drop to below and in summer, the temperature may exceed . However, the summers are short; no more than three months of the year (but at least one month) must have a 24-hour average temperature of at least to fall into this category of climate, and the coldest month should ave ...
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Mitosporic
The fungi imperfecti or imperfect fungi, are fungi which do not fit into the commonly established taxonomic classifications of fungi that are based on biological species concepts or morphological characteristics of sexual structures because their sexual form of reproduction has never been observed. They are known as imperfect fungi because only their asexual and vegetative phases are known. They have asexual form of reproduction, meaning that these fungi produce their spores asexually, in the process called sporogenesis. There are about 25,000 species that have been classified in the deuteromycota and many are basidiomycota or ascomycota anamorphs. Fungi producing the antibiotic penicillin and those that cause athlete's foot and yeast infections are algal fungi. In addition, there are a number of edible imperfect fungi, including the ones that provide the distinctive characteristics of Roquefort and Camembert cheese. Other, more informal names besides Deuteromycota ("Deuteromyc ...
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Taphrinales
The Taphrinomycetes are a class of ascomycete fungi belonging to the subdivision Taphrinomycotina. It includes the single order Taphrinales, which includes 2 families, 8 genera and 140 species In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate s .... References Fungus classes Taxa described in 1997 {{Ascomycetes-stub ...
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