Convergent Cross Mapping
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Convergent Cross Mapping
Convergent cross mapping (CCM) is a statistical test for a cause-and-effect relationship between two variables that, like the Granger causality test, seeks to resolve the problem that correlation does not imply causation. While Granger causality is best suited for purely stochastic systems where the influences of the causal variables are separable (independent of each other), CCM is based on the theory of dynamical systems and can be applied to systems where causal variables have synergistic effects. As such, CCM is specifically aimed to identify linkage between variables that can appear uncorrelated with each other. Theory In the event one has access to system variables as time series observations, Takens' embedding theorem can be applied. Takens' theorem generically proves that the state space of a dynamical system can be reconstructed from a single observed time series of the system, X. This reconstructed or ''shadow manifold'' M_X is diffeomorphic to the true manifold, M, pres ...
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Statistical Test
A statistical hypothesis test is a method of statistical inference used to decide whether the data provide sufficient evidence to reject a particular hypothesis. A statistical hypothesis test typically involves a calculation of a test statistic. Then a decision is made, either by comparing the test statistic to a critical value or equivalently by evaluating a ''p''-value computed from the test statistic. Roughly 100 specialized statistical tests are in use and noteworthy. History While hypothesis testing was popularized early in the 20th century, early forms were used in the 1700s. The first use is credited to John Arbuthnot (1710), followed by Pierre-Simon Laplace (1770s), in analyzing the human sex ratio at birth; see . Choice of null hypothesis Paul Meehl has argued that the epistemological importance of the choice of null hypothesis has gone largely unacknowledged. When the null hypothesis is predicted by theory, a more precise experiment will be a more severe tes ...
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Diffeomorphic
In mathematics, a diffeomorphism is an isomorphism of differentiable manifolds. It is an invertible function that maps one differentiable manifold to another such that both the function and its inverse are continuously differentiable. Definition Given two differentiable manifolds M and N, a continuously differentiable map f \colon M \rightarrow N is a diffeomorphism if it is a bijection and its inverse f^ \colon N \rightarrow M is differentiable as well. If these functions are r times continuously differentiable, f is called a C^r-diffeomorphism. Two manifolds M and N are diffeomorphic (usually denoted M \simeq N) if there is a diffeomorphism f from M to N. Two C^r-differentiable manifolds are C^r-diffeomorphic if there is an r times continuously differentiable bijective map between them whose inverse is also r times continuously differentiable. Diffeomorphisms of subsets of manifolds Given a subset X of a manifold M and a subset Y of a manifold N, a function f:X ...
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Predictive Analytics
Predictive analytics encompasses a variety of Statistics, statistical techniques from data mining, Predictive modelling, predictive modeling, and machine learning that analyze current and historical facts to make predictions about future or otherwise unknown events. In business, predictive models exploit Pattern detection, patterns found in historical and transactional data to identify risks and opportunities. Models capture relationships among many factors to allow assessment of risk or potential associated with a particular set of conditions, guiding decision-making for candidate transactions. The defining functional effect of these technical approaches is that predictive analytics provides a predictive score (probability) for each individual (customer, employee, healthcare patient, product SKU, vehicle, component, machine, or other organizational unit) in order to determine, inform, or influence organizational processes that pertain across large numbers of individuals, such as ...
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Nonlinear Systems
In mathematics and science, a nonlinear system (or a non-linear system) is a system in which the change of the output is not proportional to the change of the input. Nonlinear problems are of interest to engineers, biologists, physicists, mathematicians, and many other scientists since most systems are inherently nonlinear in nature. Nonlinear dynamical systems, describing changes in variables over time, may appear chaotic, unpredictable, or counterintuitive, contrasting with much simpler linear systems. Typically, the behavior of a nonlinear system is described in mathematics by a nonlinear system of equations, which is a set of simultaneous equations in which the unknowns (or the unknown functions in the case of differential equations) appear as variables of a polynomial of degree higher than one or in the argument of a function which is not a polynomial of degree one. In other words, in a nonlinear system of equations, the equation(s) to be solved cannot be written as a lin ...
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George Sugihara
George Sugihara (born in Tokyo, Japan) is currently a professor of biological oceanography in the Physical Oceanography Research Division at the Scripps Institution of Oceanography, where he is the inaugural holder of the McQuown Chair in Natural Science. Sugihara is a theoretical biologist who works across a variety of fields ranging from ecology and landscape ecology, to epidemiology, to genetics, to geoscience and atmospheric science, to quantitative finance and economics. His work involves inductive theoretical approaches to understanding nature from observational data. The general approach is different from most theory and involves minimalist inductive theory – Inductive data-driven explorations of nature using minimal assumptions. The aim is to avoid inevitable assumptions of deductive first-principle models and produce an understanding that passes the validation test of out-of-sample prediction. His initial work on fisheries as complex, chaotic systems led to work on fi ...
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Complex Dynamics
Complex dynamics, or holomorphic dynamics, is the study of dynamical systems obtained by Iterated function, iterating a complex analytic mapping. This article focuses on the case of algebraic dynamics, where a polynomial or rational function is iterated. In geometric terms, that amounts to iterating a mapping from some algebraic variety to itself. The related theory of arithmetic dynamics studies iteration over the rational numbers or the p-adic numbers instead of the complex numbers. Dynamics in complex dimension 1 A simple example that shows some of the main issues in complex dynamics is the mapping f(z)=z^2 from the complex numbers C to itself. It is helpful to view this as a map from the complex projective line \mathbf^1 to itself, by adding a point \infty to the complex numbers. (\mathbf^1 has the advantage of being compact space, compact.) The basic question is: given a point z in \mathbf^1, how does its ''orbit'' (or ''forward orbit'') :z,\; f(z)=z^2,\; f(f(z))=z^4, f(f(f(z ...
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System Dynamics
System dynamics (SD) is an approach to understanding the nonlinear behaviour of complex systems over time using stocks, flows, internal feedback loops, table functions and time delays. Overview System dynamics is a methodology and mathematical modeling technique to frame, understand, and discuss complex issues and problems. Originally developed in the 1950s to help corporate managers improve their understanding of industrial processes, SD is currently being used throughout the public and private sector for policy analysis and design. Convenient graphical user interface (GUI) system dynamics software developed into user friendly versions by the 1990s and have been applied to diverse systems. SD models solve the problem of simultaneity (mutual causation) by updating all variables in small time increments with positive and negative feedbacks and time delays structuring the interactions and control. The best known SD model is probably the 1972 ''The Limits to Growth''. This model fo ...
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Empirical Dynamic Modeling
Empirical dynamic modeling (EDM) is a framework for analysis and prediction of nonlinear dynamical systems. Applications include population dynamics,'Dixon, P. A., et al. 1999. Episodic fluctuations in larval supply. Science 283:1528–1530'Ushio, M., Hsieh, Ch., Masuda, R. et al., 2018. Fluctuating interaction network and time-varying stability of a natural fish community. Nature 554, 360–363 ecosystem service, medicine, neuroscience,'McBride, J. C., et al. Sugihara causality analysis of scalp EEG for detection of early Alzheimer's disease. Neuroimage-Clinical 7:258–265 (2015)'Tajima S, Yanagawa T, Fujii N, Toyoizumi T (2015) Untangling Brain-Wide Dynamics in Consciousness by Cross-Embedding. PLoS Comput Biol 11(11): e1004537. https://doi.org/10.1371/journal.pcbi.1004537'W. Watanakeesuntorn et al., "Massively Parallel Causal Inference of Whole Brain Dynamics at Single Neuron Resolution," 2020 IEEE 26th International Conference on Parallel and Distributed Systems (ICPADS), 2020, p ...
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State Space
In computer science, a state space is a discrete space representing the set of all possible configurations of a system. It is a useful abstraction for reasoning about the behavior of a given system and is widely used in the fields of artificial intelligence and game theory. For instance, the toy problem Vacuum World has a discrete finite state space in which there are a limited set of configurations that the vacuum and dirt can be in. A "counter" system, where states are the natural numbers starting at 1 and are incremented over time has an infinite discrete state space. The angular position of an undamped pendulum is a continuous (and therefore infinite) state space. Definition State spaces are useful in computer science as a simple model of machines. Formally, a state space can be defined as a tuple [''N'', ''A'', ''S'', ''G''] where: * ''N'' is a Set (mathematics), set of states * ''A'' is a set of arcs connecting the states * ''S'' is a nonempty subset of ''N ...
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Causality
Causality is an influence by which one Event (philosophy), event, process, state, or Object (philosophy), object (''a'' ''cause'') contributes to the production of another event, process, state, or object (an ''effect'') where the cause is at least partly responsible for the effect, and the effect is at least partly dependent on the cause. The cause of something may also be described as the reason for the event or process. In general, a process can have multiple causes,Compare: which are also said to be ''causal factors'' for it, and all lie in its past. An effect can in turn be a cause of, or causal factor for, many other effects, which all lie in its future. Some writers have held that causality is metaphysics , metaphysically prior to notions of time and space. Causality is an abstraction that indicates how the world progresses. As such it is a basic concept; it is more apt to be an explanation of other concepts of progression than something to be explained by other more fun ...
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Takens' Theorem
In the study of dynamical systems, a delay embedding theorem gives the conditions under which a chaotic dynamical system can be reconstructed from a sequence of observations of the state of that system. The reconstruction preserves the properties of the dynamical system that do not change under smooth coordinate changes (i.e., diffeomorphisms), but it does not preserve the geometric shape of structures in phase space. Takens' theorem is the 1981 delay embedding theorem of Floris Takens. It provides the conditions under which a smooth attractor can be reconstructed from the observations made with a generic function. Later results replaced the smooth attractor with a set of arbitrary box counting dimension and the class of generic functions with other classes of functions. It is the most commonly used method for attractor reconstruction. Delay embedding theorems are simpler to state for discrete-time dynamical systems. The state space of the dynamical system is a -dimensional ...
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