Branching Identification Key
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Branching Identification Key
A branching identification key within taxonomy (the practice and science of categorization or classification), is a presentation form of a single-access key where the structure of the decision tree is displayed graphically as a branching structure, involving lines between items.Winston, J. 1999. Describing Species. Columbia University Press. Depending on the number of branches at a single point, a branching key may be dichotomous or polytomous An internal node of a phylogenetic tree is described as a polytomy or multifurcation if (i) it is in a rooted tree and is linked to three or more child subtrees or (ii) it is in an unrooted tree and is attached to four or more branches. A tr .... In a diagnostic key, the branching structure of the key should not be mistaken for a phylogenetic or cladistic branching pattern. All single-access keys form a decision tree (or graph if reticulation exists), and thus all such keys have a branching structure. "Branching key" may therefore occ ...
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Taxonomy
Taxonomy is the practice and science of categorization or classification. A taxonomy (or taxonomical classification) is a scheme of classification, especially a hierarchical classification, in which things are organized into groups or types. Among other things, a taxonomy can be used to organize and index knowledge (stored as documents, articles, videos, etc.), such as in the form of a library classification system, or a search engine taxonomy, so that users can more easily find the information they are searching for. Many taxonomies are hierarchies (and thus, have an intrinsic tree structure), but not all are. Originally, taxonomy referred only to the categorisation of organisms or a particular categorisation of organisms. In a wider, more general sense, it may refer to a categorisation of things or concepts, as well as to the principles underlying such a categorisation. Taxonomy organizes taxonomic units known as "taxa" (singular "taxon")." Taxonomy is different from me ...
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Categorization
Categorization is the ability and activity of recognizing shared features or similarities between the elements of the experience of the world (such as Object (philosophy), objects, events, or ideas), organizing and classifying experience by associating them to a more abstract group (that is, a category, class, or type), on the basis of their traits, features, similarities or other criteria that are Universal (metaphysics), universal to the group. Categorization is considered one of the most fundamental cognitive abilities, and as such it is studied particularly by psychology and cognitive linguistics. Categorization is sometimes considered synonymous with classification (cf., Classification (general theory)#Synonyms and near-synonyms, Classification synonyms). Categorization and classification allow humans to organize things, objects, and ideas that exist around them and simplify their understanding of the world. Categorization is something that humans and other organisms ''do ...
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Classification (general Theory)
The term classification can apply to one or all of: * the process of classifying (distinguishing and distributing kinds of "things" into different groups) * a resulting set of classes (also called "a classification system") * the assignment of elements to pre-established classes Classifying - in the broad meaning given above - is a fundamental concept and a part of almost all kinds of activities. Classification itself is an interdisciplinary field of study. Important contributing disciplines include philosophy, biology, knowledge organization, psychology, statistics and mathematics. Definitions Frederick Suppe distinguished two senses of classification: a broad meaning, which he called "conceptual classification" and a narrow meaning, which he called "systematic classification". About conceptual classification Suppe (1989, 292) wrote: "Classification is intrinsic to the use of language, hence to most if not all communication. Whenever we use nominative phrases we are classify ...
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Single-access Key
In phylogenetics, a single-access key (also called dichotomous key, sequential key, analytical key, or pathway key) is an identification key where the sequence and structure of identification steps is fixed by the author of the key. At each point in the decision process, multiple alternatives are offered, each leading to a result or a further choice. The alternatives are commonly called "leads", and the set of leads at a given point a "couplet". Single access keys are closely related to decision trees or self-balancing binary search trees. However, to improve the usability and reliability of keys, many single-access keys incorporate reticulation, changing the tree structure into a directed acyclic graph. Single-access keys have been in use for several hundred years. They may be printed in various styles (e. g., linked, nested, indented, graphically branching) or used as interactive, computer-aided keys. In the latter case, either a longer part of the key may be displayed (opt ...
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Dichotomous Key
In phylogenetics, a single-access key (also called dichotomous key, sequential key, analytical key, or pathway key) is an identification key where the sequence and structure of identification steps is fixed by the author of the key. At each point in the decision process, multiple alternatives are offered, each leading to a result or a further choice. The alternatives are commonly called "leads", and the set of leads at a given point a "couplet". Single access keys are closely related to decision trees or self-balancing binary search trees. However, to improve the usability and reliability of keys, many single-access keys incorporate reticulation, changing the tree structure into a directed acyclic graph. Single-access keys have been in use for several hundred years. They may be printed in various styles (e. g., linked, nested, indented, graphically branching) or used as interactive, computer-aided keys. In the latter case, either a longer part of the key may be displayed (opt ...
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Polytomous Key
In phylogenetics, a single-access key (also called dichotomous key, sequential key, analytical key, or pathway key) is an identification key where the sequence and structure of identification steps is fixed by the author of the key. At each point in the decision process, multiple alternatives are offered, each leading to a result or a further choice. The alternatives are commonly called "leads", and the set of leads at a given point a "couplet". Single access keys are closely related to decision trees or self-balancing binary search trees. However, to improve the usability and reliability of keys, many single-access keys incorporate reticulation, changing the tree structure into a directed acyclic graph. Single-access keys have been in use for several hundred years. They may be printed in various styles (e. g., linked, nested, indented, graphically branching) or used as interactive, computer-aided keys. In the latter case, either a longer part of the key may be displayed (opt ...
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Reticulation (single-access Key)
In biology, a reticulation of a single-access identification key connects different branches of the identification tree to improve error tolerance and identification success. In a reticulated key, multiple paths lead to the same result; the tree data structure thus changes from a simple tree to a directed acyclic graph. Two forms of reticulation can be distinguished: Terminal reticulation and inner reticulation. * In a terminal reticulation a single taxon or next-level-key is keyed out in several locations in the key. This type of reticulation is normally compatible with any printable presentation format of identification keys and normally does not require special precautions in software used for branching keys. * In an inner reticulation a couplet with further leads can be reached through more than one path. Depending on the software or printable presentation format, this may be more challenging. For the linked (= "parallel" or "bracketed") format, where each lead points to a nu ...
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