Zymoblot
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Zymoblot
Zymoblot is the fastest available microtechnique to detect gene expression or enzyme activity in any biological specimen. The technique was invented by Professor Elsayed Elsayed Wagih in collaboration with Professor Jacqueline Fletcher of the Department of Plant Pathology, Noble Research Centre, Oklahoma State University, US in 1993.Wagih, E. E. and Fletcher, J. (1993). Zymoblot, a new microtechnique used to detect enzyme activity in spiroplasmas and bacteria. Canadian Journal of Microbiology 39: 543- 547. Background Physiological phenomena whether at the cellular or molecular level in living organisms are driven either directly or indirectly by enzyme reactions. The assay of enzyme activities in living organisms is therefore one of the most commonly performed activities in modern physiology laboratories. Numerous methods of enzyme assay Enzyme assays are laboratory methods for measuring enzymatic activity. They are vital for the study of enzyme kinetics and enzyme inhibition. ...
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Elsayed Elsayed Wagih
Elsayed Elsayed Wagih PhD, DIC, CIDTT (born 21 November 1946) is an Egyptian professor of virology and biotechnology and vice President of the Arab Society for Biotechnology. He was born in Alexandria, Egypt. Wagih is well known for having invented Zymoblot, the fastest available microtechnique to detect gene expression and/or enzyme activity in any biological specimen as well as the ”Mirror Image ''in vivo'' electro-blotting technique” that detects virus particles or any foreign protein (Gene Expression) in any tissue. He also discovered two viruses reported under his name in the world data bank of viruses, the first was named "Peanut Chlorotic Ringspot Virus (PCRV)" and the second was called “Peanut Top Paralysis (PTPV)". Also, a champion in Greek-Roman and free-style wrestling in Egypt for the period from 1965 to 1977. He was the one who made the College of Agriculture enjoy, for the first time at the level of University of Alexandria, the winning, in 1965–1966, of fi ...
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Microtechnique
Microtechnique is an aggregate of methods used to prepare micro-objects for studying. It is currently being employed in many fields in life science. Two well-known branches of microtechnique are botanical (plant) microtechnique and zoological (animal) microtechnique. With respect to both plant microtechnique and animal microtechnique, four types of methods are commonly used, which are whole mounts, smears, squashes, and sections, in recent micro experiments. Plant microtechnique contains direct macroscopic examinations, freehand sections, clearing, maceration, embedding, and staining. Moreover, three preparation ways used in zoological micro observations are paraffin method, celloidin method, and freezing method. History The early development of microtechnique in botany is closely related to that in zoology. Zoological and botanical discoveries are adopted by both zoologists and botanists. The field of microtechnique lasted from at the end of the 1930s when the principle of dry p ...
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Sequential Order
In mathematics, a sequence is an enumerated collection of objects in which repetitions are allowed and order matters. Like a set, it contains members (also called ''elements'', or ''terms''). The number of elements (possibly infinite) is called the ''length'' of the sequence. Unlike a set, the same elements can appear multiple times at different positions in a sequence, and unlike a set, the order does matter. Formally, a sequence can be defined as a function from natural numbers (the positions of elements in the sequence) to the elements at each position. The notion of a sequence can be generalized to an indexed family, defined as a function from an ''arbitrary'' index set. For example, (M, A, R, Y) is a sequence of letters with the letter 'M' first and 'Y' last. This sequence differs from (A, R, M, Y). Also, the sequence (1, 1, 2, 3, 5, 8), which contains the number 1 at two different positions, is a valid sequence. Sequences can be ''finite'', as in these examples, or ''infinite ...
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Enzyme Inhibitor
An enzyme inhibitor is a molecule that binds to an enzyme and blocks its activity. Enzymes are proteins that speed up chemical reactions necessary for life, in which substrate molecules are converted into products. An enzyme facilitates a specific chemical reaction by binding the substrate to its active site, a specialized area on the enzyme that accelerates the most difficult step of the reaction. An enzyme inhibitor stops ("inhibits") this process, either by binding to the enzyme's active site (thus preventing the substrate itself from binding) or by binding to another site on the enzyme such that the enzyme's catalysis of the reaction is blocked. Enzyme inhibitors may bind reversibly or irreversibly. Irreversible inhibitors form a chemical bond with the enzyme such that the enzyme is inhibited until the chemical bond is broken. By contrast, reversible inhibitors bind non-covalently and may spontaneously leave the enzyme, allowing the enzyme to resume its function. Reve ...
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Tris-buffered Saline
Tris-buffered saline (TBS) is a buffer used in some biochemical techniques to maintain the pH within a relatively narrow range. Tris Tris, or tris(hydroxymethyl)aminomethane, or known during medical use as tromethamine or THAM, is an organic compound with the formula (HOCH2)3CNH2, one of the twenty Good's buffers. It is extensively used in biochemistry and molecular biology as ... (with HCl) has a slightly alkaline buffering capacity in the 7–9.2 range. The conjugate acid of Tris has a pKa of 8.07 at 25 °C. The pKa declines approximately 0.03 units per degree Celsius rise in temperature. This can lead to relatively dramatic pH shifts when there are shifts in solution temperature. Sodium chloride concentration may vary from 100 to 200 mM, tris concentration from 5 to 100 mM and pH from 7.2 to 8.0. A common formulation of TBS is 150 mM NaCl, 50 mM Tris-HCl, pH 7.6. TBS can also be prepared by using commercially made TBS buffer tablets or pouches. Applications TBS is isoton ...
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Cuvette
A cuvette ( French: cuvette = "little vessel") is a small tube-like container with straight sides and a circular or square cross section. It is sealed at one end, and made of a clear, transparent material such as plastic, glass, or fused quartz. Cuvettes are designed to hold samples for spectroscopic measurement, where a beam of light is passed through the sample within the cuvette to measure the absorbance, transmittance, fluorescence intensity, fluorescence polarization, or fluorescence lifetime of the sample. This measurement is done with a spectrophotometer. Overview Traditional ultraviolet–visible spectroscopy or fluorescence spectroscopy uses samples that are liquid. Often the sample is a solution, with the substance of interest dissolved within. The sample is placed in a cuvette and the cuvette is placed in a spectrophotometer for testing. The cuvette can be made of any material that is transparent in the range of wavelengths used in the test. The smallest cuvett ...
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Aliquot
Aliquot ( la, a few, some, not many) may refer to: Mathematics *Aliquot part, a proper divisor of an integer *Aliquot sum, the sum of the aliquot parts of an integer *Aliquot sequence, a sequence of integers in which each number is the aliquot sum of the previous number Music *Aliquot stringing, in stringed instruments, the use of strings which are not struck to make a note, but which resonate sympathetically with struck notes *Aliquot stop, an organ stop that adds harmonics or overtones instead of the primary pitch Sciences *Aliquot of a sample, in chemistry or the other sciences, an exact portion of a sample or total amount of a liquid (e.g. exactly 25 mL of water taken from 250 ml) *Aliquot in pharmaceutics, a method of measuring ingredients below the sensitivity of a scale by proportional dilution with inactive known ingredients *Genome aliquoting, the problem of reconstructing an ancestral genome from the genomes of polyploid descendants Other uses *Aliquot part, in the US P ...
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Colorimetry
Colorimetry is "the science and technology used to quantify and describe physically the human color perception". It is similar to spectrophotometry, but is distinguished by its interest in reducing spectra to the physical correlates of color perception, most often the CIE 1931 XYZ color space tristimulus values and related quantities. History The Duboscq colorimeter was invented by Jules Duboscq in 1870. Instruments Colorimetric equipment is similar to that used in spectrophotometry. Some related equipment is also mentioned for completeness. * A tristimulus colorimeter measures the tristimulus values of a color. * A spectroradiometer measures the absolute spectral radiance (intensity) or irradiance of a light source. * A spectrophotometer measures the spectral reflectance, transmittance, or relative irradiance of a color sample. * A ''spectrocolorimeter'' is a spectrophotometer that can ''calculate'' tristimulus values. * A densitometer measures the degree of light ...
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Insoluble
In chemistry, solubility is the ability of a substance, the solute, to form a solution with another substance, the solvent. Insolubility is the opposite property, the inability of the solute to form such a solution. The extent of the solubility of a substance in a specific solvent is generally measured as the concentration of the solute in a saturated solution, one in which no more solute can be dissolved. At this point, the two substances are said to be at the solubility equilibrium. For some solutes and solvents, there may be no such limit, in which case the two substances are said to be "miscible in all proportions" (or just "miscible"). The solute can be a solid, a liquid, or a gas, while the solvent is usually solid or liquid. Both may be pure substances, or may themselves be solutions. Gases are always miscible in all proportions, except in very extreme situations,J. de Swaan Arons and G. A. M. Diepen (1966): "Gas—Gas Equilibria". ''Journal of Chemical Physics'', vo ...
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Virus
A virus is a submicroscopic infectious agent that replicates only inside the living cells of an organism. Viruses infect all life forms, from animals and plants to microorganisms, including bacteria and archaea. Since Dmitri Ivanovsky's 1892 article describing a non-bacterial pathogen infecting tobacco plants and the discovery of the tobacco mosaic virus by Martinus Beijerinck in 1898,Dimmock p. 4 more than 9,000 virus species have been described in detail of the millions of types of viruses in the environment. Viruses are found in almost every ecosystem on Earth and are the most numerous type of biological entity. The study of viruses is known as virology, a subspeciality of microbiology. When infected, a host cell is often forced to rapidly produce thousands of copies of the original virus. When not inside an infected cell or in the process of infecting a cell, viruses exist in the form of independent particles, or ''virions'', consisting of (i) the genetic material, i. ...
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Peroxidase
Peroxidases or peroxide reductases ( EC numberbr>1.11.1.x are a large group of enzymes which play a role in various biological processes. They are named after the fact that they commonly break up peroxides. Functionality Peroxidases typically catalyze a reaction of the form: :ROOR' + \overset + 2H+ -> ce + R'OH Optimal substrates For many of these enzymes the optimal substrate is hydrogen peroxide, but others are more active with organic hydroperoxides such as lipid peroxides. Peroxidases can contain a heme cofactor in their active sites, or alternately redox-active cysteine or selenocysteine residues. The nature of the electron donor is very dependent on the structure of the enzyme. * For example, horseradish peroxidase can use a variety of organic compounds as electron donors and acceptors. Horseradish peroxidase has an accessible active site, and many compounds can reach the site of the reaction. * On the other hand, for an enzyme such as cytochrome c peroxidase, the co ...
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