YAP (genetics)
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YAP (genetics)
Haplogroup DE is a human Y-chromosome DNA haplogroup. It is defined by the single nucleotide polymorphism (SNP) mutations, or UEPs, M1(YAP), M145(P205), M203, P144, P153, P165, P167, P183. DE is unique because it is distributed in several geographically distinct clusters. An immediate subclade, haplogroup D (also known as D-CTS3946), is mainly found in East Asia, parts of Central Asia, and the Andaman Islands, but also sporadically in West Africa and West Asia. The other immediate subclade, haplogroup E, is common in Africa, and to a lesser extent the Middle East and southern Europe. The most well-known unique event polymorphism (UEP) that defines DE is the Y-chromosome Alu Polymorphism "YAP''"''. The mutation was caused when a strand of DNA, known as Alu, inserted a copy of itself into the Y chromosome. Hence, all Y chromosomes belonging to DE, D, E and their subclades are YAP-positive (YAP+). All Y chromosomes that belong to other haplogroups and subclades are YAP-negative ...
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Haplogroup CF (Y-DNA)
Haplogroup CF, also known as CF-P143 and CT(xDE), is a human Y-chromosome DNA haplogroup. This paternal lineage is defined by the SNP P143. The clade's existence and distribution are inferred from the fact that haplogroups descended from CF include most human male lineages in Eurasia, Oceania and The Americas. CF is an immediate descendant of the Haplogroup CT (CT-M168), and is the sibling of Haplogroup DE (DE-YAP). It is the immediate ancestor of both Haplogroup C and Haplogroup F. There are, as yet, no confirmed cases of living individuals or human remains belonging to the basal, undivergent haplogroup CF*. In the year 2017, C-M217 (C2) & C-M130 were reported among males belonging to the Shan people The Shan people ( shn, တႆး; , my, ရှမ်းလူမျိုး; ), also known as the Tai Long, or Tai Yai are a Tai ethnic group of Southeast Asia. The Shan are the biggest minority of Burma (Myanmar) and primarily live in th ...s, who are concentrated in ...
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Alu Sequence
An Alu element is a short stretch of DNA originally characterized by the action of the ''Arthrobacter luteus (Alu)'' restriction endonuclease. ''Alu'' elements are the most abundant transposable elements, containing over one million copies dispersed throughout the human genome. ''Alu'' elements were thought to be selfish or parasitic DNA, because their sole known function is self reproduction. However, they are likely to play a role in evolution and have been used as genetic markers. They are derived from the small cytoplasmic 7SL RNA, a component of the signal recognition particle. ''Alu'' elements are highly conserved within primate genomes and originated in the genome of an ancestor of Supraprimates. ''Alu'' insertions have been implicated in several inherited human diseases and in various forms of cancer. The study of Alu elements has also been important in elucidating human population genetics and the evolution of primates, including the evolution of humans. Alu fam ...
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Tibeto-Burman Languages
The Tibeto-Burman languages are the non-Sinitic members of the Sino-Tibetan language family, over 400 of which are spoken throughout the Southeast Asian Massif ("Zomia") as well as parts of East Asia and South Asia. Around 60 million people speak Tibeto-Burman languages. The name derives from the most widely spoken of these languages, Burmese and the Tibetic languages, which also have extensive literary traditions, dating from the 12th and 7th centuries respectively. Most of the other languages are spoken by much smaller communities, and many of them have not been described in detail. Though the division of Sino-Tibetan into Sinitic and Tibeto-Burman branches (e.g. Benedict, Matisoff) is widely used, some historical linguists criticize this classification, as the non-Sinitic Sino-Tibetan languages lack any shared innovations in phonology or morphology to show that they comprise a clade of the phylogenetic tree. History During the 18th century, several scholars noticed parallels ...
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Tibet
Tibet (; ''Böd''; ) is a region in East Asia, covering much of the Tibetan Plateau and spanning about . It is the traditional homeland of the Tibetan people. Also resident on the plateau are some other ethnic groups such as Monpa people, Monpa, Tamang people, Tamang, Qiang people, Qiang, Sherpa people, Sherpa and Lhoba peoples and now also considerable numbers of Han Chinese and Hui people, Hui settlers. Since Annexation of Tibet by the People's Republic of China, 1951, the entire plateau has been under the administration of the People's Republic of China, a major portion in the Tibet Autonomous Region, and other portions in the Qinghai and Sichuan provinces. Tibet is the highest region on Earth, with an average elevation of . Located in the Himalayas, the highest elevation in Tibet is Mount Everest, Earth's highest mountain, rising 8,848.86 m (29,032 ft) above sea level. The Tibetan Empire emerged in the 7th century. At its height in the 9th century, the Tibet ...
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Guinea Bissau
Guinea-Bissau ( ; pt, Guiné-Bissau; ff, italic=no, 𞤘𞤭𞤲𞤫 𞤄𞤭𞤧𞤢𞥄𞤱𞤮, Gine-Bisaawo, script=Adlm; Mandinka: ''Gine-Bisawo''), officially the Republic of Guinea-Bissau ( pt, República da Guiné-Bissau, links=no ), is a country in West Africa that covers with an estimated population of 1,726,000. It borders Senegal to the north and Guinea to the south-east. Guinea-Bissau was once part of the kingdom of Kaabu, as well as part of the Mali Empire. Parts of this kingdom persisted until the 18th century, while a few others were under some rule by the Portuguese Empire since the 16th century. In the 19th century, it was colonised as Portuguese Guinea. Portuguese control was restricted and weak until the early 20th century with the pacification campaigns, these campaigns solidified Portuguese sovereignty in the area. The final Portuguese victory over the remaining bastion of mainland resistance, the Papel ruled Kingdom of Bissau in 1915 by the Portugu ...
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Nalu Language
Nalu (''nalɛ'', ''nul''; also spelled Nalou) is an Atlantic language of Guinea and Guinea-Bissau, spoken by the Nalu people, a West African people who settled the region before the arrival of the Mandinka in the 14th or 15th centuries. It is spoken predominantly by adults. It is estimated to be spoken by a range of 10,000 to 25,000 people, whereas Wilson (2007) reports that there are around 12,000 speakers. It is considered an endangered language due to its dwindling population of speakers. Classification Contrary to prior classifications, Güldemann (2018) classifies Nalu as unclassified within Niger-Congo. It also does not form a subgroup with the Rio Nunez languages. Nalu is traditionally classified as Niger-Congo, Atlantic-Congo, Mbulugish-Nalu. History The Nalu people who speak Nalu have been described as settling in West Africa before the Mandinka people. This would place them as existing in West Africa between the 14th and 15th centuries. Wilson (2007) reports tha ...
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Paraphyletic
In taxonomy (general), taxonomy, a group is paraphyletic if it consists of the group's most recent common ancestor, last common ancestor and most of its descendants, excluding a few Monophyly, monophyletic subgroups. The group is said to be paraphyletic ''with respect to'' the excluded subgroups. In contrast, a monophyletic group (a clade) includes a common ancestor and ''all'' of its descendants. The terms are commonly used in phylogenetics (a subfield of biology) and in the tree model of historical linguistics. Paraphyletic groups are identified by a combination of Synapomorphy and apomorphy, synapomorphies and symplesiomorphy, symplesiomorphies. If many subgroups are missing from the named group, it is said to be polyparaphyletic. The term was coined by Willi Hennig to apply to well-known taxa like Reptilia (reptiles) which, as commonly named and traditionally defined, is paraphyletic with respect to mammals and birds. Reptilia contains the last common ancestor of reptiles a ...
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Nigeria
Nigeria ( ), , ig, Naìjíríyà, yo, Nàìjíríà, pcm, Naijá , ff, Naajeeriya, kcg, Naijeriya officially the Federal Republic of Nigeria, is a country in West Africa. It is situated between the Sahel to the north and the Gulf of Guinea to the south in the Atlantic Ocean. It covers an area of , and with a population of over 225 million, it is the most populous country in Africa, and the world's sixth-most populous country. Nigeria borders Niger in the north, Chad in the northeast, Cameroon in the east, and Benin in the west. Nigeria is a federal republic comprising of 36 states and the Federal Capital Territory, where the capital, Abuja, is located. The largest city in Nigeria is Lagos, one of the largest metropolitan areas in the world and the second-largest in Africa. Nigeria has been home to several indigenous pre-colonial states and kingdoms since the second millennium BC, with the Nok civilization in the 15th century BC, marking the first ...
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Caribbean
The Caribbean (, ) ( es, El Caribe; french: la Caraïbe; ht, Karayib; nl, De Caraïben) is a region of the Americas that consists of the Caribbean Sea, its islands (some surrounded by the Caribbean Sea and some bordering both the Caribbean Sea and the North Atlantic Ocean) and the surrounding coasts. The region is southeast of the Gulf of Mexico and the North American mainland, east of Central America, and north of South America. Situated largely on the Caribbean Plate, the region has more than 700 islands, islets, reefs and cays (see the list of Caribbean islands). Island arcs delineate the eastern and northern edges of the Caribbean Sea: The Greater Antilles and the Lucayan Archipelago on the north and the Lesser Antilles and the on the south and east (which includes the Leeward Antilles). They form the West Indies with the nearby Lucayan Archipelago (the Bahamas and Turks and Caicos Islands), which are considered to be part of the Caribbean despite not bordering the Caribbe ...
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Basal (phylogenetics)
In phylogenetics, basal is the direction of the ''base'' (or root) of a phylogenetic tree#Rooted tree, rooted phylogenetic tree or cladogram. The term may be more strictly applied only to nodes adjacent to the root, or more loosely applied to nodes regarded as being close to the root. Note that extant taxa that lie on branches connecting directly to the root are not more closely related to the root than any other extant taxa. While there must always be two or more equally "basal" clades sprouting from the root of every cladogram, those clades may differ widely in taxonomic rank, Phylogenetic diversity, species diversity, or both. If ''C'' is a basal clade within ''D'' that has the lowest rank of all basal clades within ''D'', ''C'' may be described as ''the'' basal taxon of that rank within ''D''. The concept of a 'key innovation' implies some degree of correlation between evolutionary innovation and cladogenesis, diversification. However, such a correlation does not make a given ca ...
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Haplogroup CF
Haplogroup CF, also known as CF-P143 and CT(xDE), is a human Y-chromosome DNA haplogroup. This paternal lineage is defined by the SNP P143. The clade's existence and distribution are inferred from the fact that haplogroups descended from CF include most human male lineages in Eurasia, Oceania and The Americas. CF is an immediate descendant of the Haplogroup CT (CT-M168), and is the sibling of Haplogroup DE (DE-YAP). It is the immediate ancestor of both Haplogroup C and Haplogroup F. There are, as yet, no confirmed cases of living individuals or human remains belonging to the basal, undivergent haplogroup CF*. In the year 2017, C-M217 (C2) & C-M130 were reported among males belonging to the Shan people The Shan people ( shn, တႆး; , my, ရှမ်းလူမျိုး; ), also known as the Tai Long, or Tai Yai are a Tai ethnic group of Southeast Asia. The Shan are the biggest minority of Burma (Myanmar) and primarily live in th ...s, who are concentrated in ...
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East Africa
East Africa, Eastern Africa, or East of Africa, is the eastern subregion of the African continent. In the United Nations Statistics Division scheme of geographic regions, 10-11-(16*) territories make up Eastern Africa: Due to the historical Omani Empire and colonial territories of the British East Africa Protectorate and German East Africa, the term ''East Africa'' is often (especially in the English language) used to specifically refer to the area now comprising the three countries of Kenya, Tanzania, and Uganda. However, this has never been the convention in many other languages, where the term generally had a wider, strictly geographic context and therefore typically included Djibouti, Eritrea, Ethiopia, and Somalia.Somaliland is not included in the United Nations geoscheme, as it is internationally recognized as a part of Somalia. *Tanzania, Kenya, Uganda, Rwanda, Burundi, Democratic Republic of Congo and South Sudan are members of the East African Community. The firs ...
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