Spo11
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Spo11
Spo11 is a protein that in humans is encoded by the ''SPO11'' gene. Spo11, in a complex with mTopVIB, creates double strand breaks to initiate meiotic recombination. Its active site contains a tyrosine which ligates and dissociates with DNA to promote break formation. One Spo11 protein is involved per strand of DNA, thus two Spo11 proteins are involved in each double stranded break event. Genetic exchange between two DNA molecules by homologous recombination begins with a break in both strands of DNA—called a double-strand break—and recombination is started by an endonuclease enzyme that cuts the DNA molecule that "receives" the exchanged DNA. In meiosis the enzyme is SPO11, which is related to DNA topoisomerases. Topoisomerases change DNA by transiently breaking one or both strands, passing the unbroken DNA strand or strands through the break and repairing the break; the broken ends of the DNA are covalently linked to topoisomerase. SPO11 is similarly attached to the DNA whe ...
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Homologous Recombination
Homologous recombination is a type of genetic recombination in which genetic information is exchanged between two similar or identical molecules of double-stranded or single-stranded nucleic acids (usually DNA as in cellular organisms but may be also RNA in viruses). Homologous recombination is widely used by cells to accurately DNA repair harmful breaks that occur on both strands of DNA, known as double-strand breaks (DSB), in a process called homologous recombinational repair (HRR). Homologous recombination also produces new combinations of DNA sequences during meiosis, the process by which eukaryotes make gamete cells, like sperm and egg cells in animals. These new combinations of DNA represent genetic variation in offspring, which in turn enables populations to adapt during the course of evolution. Homologous recombination is also used in horizontal gene transfer to exchange genetic material between different strains and species of bacteria and viruses. Horizontal ...
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Meiosis
Meiosis (; , since it is a reductional division) is a special type of cell division of germ cells in sexually-reproducing organisms that produces the gametes, such as sperm or egg cells. It involves two rounds of division that ultimately result in four cells with only one copy of each chromosome ( haploid). Additionally, prior to the division, genetic material from the paternal and maternal copies of each chromosome is crossed over, creating new combinations of code on each chromosome. Later on, during fertilisation, the haploid cells produced by meiosis from a male and female will fuse to create a cell with two copies of each chromosome again, the zygote. Errors in meiosis resulting in aneuploidy (an abnormal number of chromosomes) are the leading known cause of miscarriage and the most frequent genetic cause of developmental disabilities. In meiosis, DNA replication is followed by two rounds of cell division to produce four daughter cells, each with half the number of chr ...
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Meiosis
Meiosis (; , since it is a reductional division) is a special type of cell division of germ cells in sexually-reproducing organisms that produces the gametes, such as sperm or egg cells. It involves two rounds of division that ultimately result in four cells with only one copy of each chromosome ( haploid). Additionally, prior to the division, genetic material from the paternal and maternal copies of each chromosome is crossed over, creating new combinations of code on each chromosome. Later on, during fertilisation, the haploid cells produced by meiosis from a male and female will fuse to create a cell with two copies of each chromosome again, the zygote. Errors in meiosis resulting in aneuploidy (an abnormal number of chromosomes) are the leading known cause of miscarriage and the most frequent genetic cause of developmental disabilities. In meiosis, DNA replication is followed by two rounds of cell division to produce four daughter cells, each with half the number of chr ...
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Amoeba
An amoeba (; less commonly spelled ameba or amœba; plural ''am(o)ebas'' or ''am(o)ebae'' ), often called an amoeboid, is a type of Cell (biology), cell or unicellular organism with the ability to alter its shape, primarily by extending and retracting pseudopodia, pseudopods. Amoebae do not form a single Taxonomy (biology), taxonomic group; instead, they are found in every major Lineage (evolution), lineage of eukaryote, eukaryotic organisms. Amoeboid cells occur not only among the protozoa, but also in fungi, algae, and animals. Microbiologists often use the terms "amoeboid" and "amoeba" interchangeably for any organism that exhibits amoeboid movement. In older classification systems, most amoebae were placed in the Class (biology), class or subphylum Sarcodina, a grouping of Unicellular organism, single-celled organisms that possess pseudopods or move by protoplasmic flow. However, molecular phylogenetic studies have shown that Sarcodina is not a monophyletic group whose memb ...
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Protein
Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, responding to stimuli, providing structure to cells and organisms, and transporting molecules from one location to another. Proteins differ from one another primarily in their sequence of amino acids, which is dictated by the nucleotide sequence of their genes, and which usually results in protein folding into a specific 3D structure that determines its activity. A linear chain of amino acid residues is called a polypeptide. A protein contains at least one long polypeptide. Short polypeptides, containing less than 20–30 residues, are rarely considered to be proteins and are commonly called peptides. The individual amino acid residues are bonded together by peptide bonds and adjacent amino acid residues. The sequence of amino acid residue ...
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Sexual Reproduction
Sexual reproduction is a type of reproduction that involves a complex life cycle in which a gamete ( haploid reproductive cells, such as a sperm or egg cell) with a single set of chromosomes combines with another gamete to produce a zygote that develops into an organism composed of cells with two sets of chromosomes ( diploid). This is typical in animals, though the number of chromosome sets and how that number changes in sexual reproduction varies, especially among plants, fungi, and other eukaryotes. Sexual reproduction is the most common life cycle in multicellular eukaryotes, such as animals, fungi and plants. Sexual reproduction also occurs in some unicellular eukaryotes. Sexual reproduction does not occur in prokaryotes, unicellular organisms without cell nuclei, such bacteria and archaea. However, some process in bacteria may be considered analogous to sexual reproduction in that they incorporate new genetic information, including bacterial conjugation, transformatio ...
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Polysphondylium Pallidum
''Polysphondylium pallidum'' is a species of cellular slime mould, a member of the phylum Mycetozoa. Taxonomy The lectotype of ''Polysphondylium pallidum'' was first described from Liberia where it was growing on the dung of an ass. This slime mould has a world-wide distribution but there has been found to be variation between different samples and in a taxonomic revision in 2008, Kawakami and Hagiwara determined that some specimens originally described as ''P. pallidum'' were a different species, '' Polysphondylium album''. Biology ''Polysphondylium pallidum'' starts life as a single-celled amoeboid protist. Like other slime moulds, it lives in soil, dung, leaf litter and other decaying organic materials. It is known as a myxamoeba and feeds on bacteria and fungal spores. In favourable, damp conditions it may reproduce sexually while in drier conditions, asexual reproduction is more likely. The myxamoebae release a chemical agent, acrasin, which guides other slime mould ...
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Dictyostelium Discoideum
''Dictyostelium discoideum'' is a species of soil-dwelling amoeba belonging to the phylum Amoebozoa, infraphylum Mycetozoa. Commonly referred to as slime mold, ''D. discoideum'' is a eukaryote that transitions from a collection of unicellular amoebae into a multicellular slug and then into a fruiting body within its lifetime. Its unique asexual lifecycle consists of four stages: vegetative, aggregation, migration, and culmination. The lifecycle of ''D. discoideum'' is relatively short, which allows for timely viewing of all stages. The cells involved in the lifecycle undergo movement, chemical signaling, and development, which are applicable to human cancer research. The simplicity of its lifecycle makes ''D. discoideum'' a valuable model organism to study genetic, cellular, and biochemical processes in other organisms. Natural habitat and diet In the wild, ''D. discoideum'' can be found in soil and moist leaf litter. Its primary diet consists of bacteria, such as ''Escherichia ...
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Acytostelium
''Acytostelium'' is a genus of dictyostelid The dictyostelids (Dictyostelia/Dictyostelea, ICZN, or Dictyosteliomycetes, ICBN) are a group of cellular slime molds, or social amoebae. Multicellular behavior When food (normally bacteria) is readily available dictyostelids behave as individu .... The genus ''Acytostelium'' inhabit surface humus and leaf mold of forest soils and are widely distributed in different forests of the world. Species include: * '' Acytostelium aggregatum'' Cavender & Vadell 2000 * '' Acytostelium amazonicum'' Cavender & Vadell 2000 * '' Acytostelium anastomosans'' Cavender et al. 2005 * '' Acytostelium digitatum'' Cavender & Vadell 2000 * '' Acytostelium irregularosporum'' Hagiw. 1971 * '' Acytostelium leptosomum'' Raper 1956 * '' Acytostelium longisorophorum'' Cavender et al. 2005 * '' Acytostelium magniphorum'' Cavender & Vadell 2000 * '' Acytostelium magnisorum'' Cavender et al. 2005 * '' Acytostelium minutissimum'' Cavender & Vadell 2000 * '' Acyto ...
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Polysphondylium
''Polysphondylium'' is a genus of cellular slime mold, including the species ''Polysphondylium pallidum''. The genus was circumscribed by German mycologist Julius Oscar Brefeld in 1884. Species *''Polysphondylium acuminatum'' Vadell & Cavender 1998 nom. inv. *''Polysphondylium aureum'' Hodgson & Wheller 2001 nom. inv. *''Polysphondylium fuscans'' Perrigo & Romeralo 2012 *''Polysphondylium laterosorum'' (Cavender 1970) Baldauf, Sheikh & Thulin 2017 *''Polysphondylium patagonicum'' Vadell et al. 2011 *''Polysphondylium violaceum'' Brefeld 1885 See also *''Dictyostelium'' so-called cellular slime mold. References

Amoebozoa genera Mycetozoa Taxa named by Julius Oscar Brefeld {{Amoebozoa-stub ...
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Dictyostelium
''Dictyostelium'' is a genus of single- and multi-celled eukaryotic, phagotrophic bacterivores. Though they are Protista and in no way fungal, they traditionally are known as "slime molds". They are present in most terrestrial ecosystems as a normal and often abundant component of the soil microflora, and play an important role in the maintenance of balanced bacterial populations in soils. The genus ''Dictyostelium'' is in the order Dictyosteliida, the so-called cellular slime molds or social amoebae. In turn the order is in the infraphylum Mycetozoa. Members of the order are Protista of great theoretical interest in biology because they have aspects of both unicellularity and multicellularity. The individual cells in their independent phase are common on organic detritus or in damp soils and caves. In this phase they are amoebae. Typically, the amoebal cells grow separately and wander independently, feeding mainly on bacteria. However, they interact to form multi-cellula ...
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AP Site
In biochemistry and molecular genetics, an AP site (apurinic/apyrimidinic site), also known as an abasic site, is a location in DNA (also in RNA but much less likely) that has neither a purine nor a pyrimidine base, either spontaneously or due to DNA damage. It has been estimated that under physiological conditions 10,000 apurinic sites and 500 apyrimidinic may be generated in a cell daily. AP sites can be formed by spontaneous depurination, but also occur as intermediates in base excision repair.Abasic sites in DNA: repair and biological consequences in Saccharomyces cerevisiae. DNA Repair (Amst). 2004 Jan 5;3(1):1-12. In this process, a DNA glycosylase recognizes a damaged base and cleaves the N-glycosidic bond to release the base, leaving an AP site. A variety of glycosylases that recognize different types of damage exist, including oxidized or methylated bases, or uracil in DNA. The AP site can then be cleaved by an AP endonuclease, leaving 3'-hydroxyl and deoxyribose-5-ph ...
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