Rainbow Box
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Rainbow Box
A rainbow box is a data visualization technique for overlapping sets. Rainbow boxes are an alternative to Euler and Venn diagrams. The figure on the right shows rainbow boxes displaying the properties of amino acids. In rainbow boxes, the elements are shown in columns (e.g. the amino acids), and each set is represented by a rectangular box (e.g. the groups of amino acids sharing a given property). Each box covers the columns corresponding to the elements belonging to its set. When the elements of a given set are not displayed in contiguous columns, a “holes” is present in the box of the set (in the amino acids example on the right, the "Polar" box has three holes). The column order is computed using a heuristic optimization algorithm, in order to minimize the number of holes. A specific color is associated with each column, ranging across the spectrum, and box colors are the mean of the colors of the columns it covers. Boxes are stacked vertically, the largest boxes being ...
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Rainbow Boxes Displaying The Properties Of Amino Acids
A rainbow is a meteorological phenomenon that is caused by reflection, refraction and dispersion of light in water droplets resulting in a spectrum of light appearing in the sky. It takes the form of a multicoloured circular arc. Rainbows caused by sunlight always appear in the section of sky directly opposite the Sun. Rainbows can be full circles. However, the observer normally sees only an arc formed by illuminated droplets above the ground, and centered on a line from the Sun to the observer's eye. In a primary rainbow, the arc shows red on the outer part and violet on the inner side. This rainbow is caused by light being refracted when entering a droplet of water, then reflected inside on the back of the droplet and refracted again when leaving it. In a double rainbow, a second arc is seen outside the primary arc, and has the order of its colours reversed, with red on the inner side of the arc. This is caused by the light being reflected twice on the inside of the d ...
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Amino Acids Venn Diagram
In chemistry, amines (, ) are compounds and functional groups that contain a basic nitrogen atom with a lone pair. Amines are formally derivatives of ammonia (), wherein one or more hydrogen atoms have been replaced by a substituent such as an alkyl or aryl group (these may respectively be called alkylamines and arylamines; amines in which both types of substituent are attached to one nitrogen atom may be called alkylarylamines). Important amines include amino acids, biogenic amines, trimethylamine, and aniline; Inorganic derivatives of ammonia are also called amines, such as monochloramine (). The substituent is called an amino group. Compounds with a nitrogen atom attached to a carbonyl group, thus having the structure , are called amides and have different chemical properties from amines. Classification of amines Amines can be classified according to the nature and number of substituents on nitrogen. Aliphatic amines contain only H and alkyl substitue ...
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Data Visualization
Data and information visualization (data viz or info viz) is an interdisciplinary field that deals with the graphic representation of data and information. It is a particularly efficient way of communicating when the data or information is numerous as for example a time series. It is also the study of visual representations of abstract data to reinforce human cognition. The abstract data include both numerical and non-numerical data, such as text and geographic information. It is related to infographics and scientific visualization. One distinction is that it's information visualization when the spatial representation (e.g., the page layout of a graphic design) is chosen, whereas it's scientific visualization when the spatial representation is given. From an academic point of view, this representation can be considered as a mapping between the original data (usually numerical) and graphic elements (for example, lines or points in a chart). The mapping determines how the attri ...
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Set (mathematics)
A set is the mathematical model for a collection of different things; a set contains '' elements'' or ''members'', which can be mathematical objects of any kind: numbers, symbols, points in space, lines, other geometrical shapes, variables, or even other sets. The set with no element is the empty set; a set with a single element is a singleton. A set may have a finite number of elements or be an infinite set. Two sets are equal if they have precisely the same elements. Sets are ubiquitous in modern mathematics. Indeed, set theory, more specifically Zermelo–Fraenkel set theory, has been the standard way to provide rigorous foundations for all branches of mathematics since the first half of the 20th century. History The concept of a set emerged in mathematics at the end of the 19th century. The German word for set, ''Menge'', was coined by Bernard Bolzano in his work ''Paradoxes of the Infinite''. Georg Cantor, one of the founders of set theory, gave the following defin ...
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Euler Diagram
An Euler diagram (, ) is a diagrammatic means of representing sets and their relationships. They are particularly useful for explaining complex hierarchies and overlapping definitions. They are similar to another set diagramming technique, Venn diagrams. Unlike Venn diagrams, which show all possible relations between different sets, the Euler diagram shows only relevant relationships. The first use of "Eulerian circles" is commonly attributed to Swiss mathematician Leonhard Euler (1707–1783). In the United States, both Venn and Euler diagrams were incorporated as part of instruction in set theory as part of the new math movement of the 1960s. Since then, they have also been adopted by other curriculum fields such as reading as well as organizations and businesses. Euler diagrams consist of simple closed shapes in a two-dimensional plane that each depict a set or category. How or whether these shapes overlap demonstrates the relationships between the sets. Each curve divide ...
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Venn Diagram
A Venn diagram is a widely used diagram style that shows the logical relation between set (mathematics), sets, popularized by John Venn (1834–1923) in the 1880s. The diagrams are used to teach elementary set theory, and to illustrate simple set relationships in probability, logic, statistics, linguistics and computer science. A Venn diagram uses simple closed curves drawn on a plane to represent sets. Very often, these curves are circles or ellipses. Similar ideas had been proposed before Venn. Christian Weise in 1712 (''Nucleus Logicoe Wiesianoe'') and Leonhard Euler (''Letters to a German Princess'') in 1768, for instance, came up with similar ideas. The idea was popularised by Venn in ''Symbolic Logic'', Chapter V "Diagrammatic Representation", 1881. Details A Venn diagram may also be called a ''set diagram'' or ''logic diagram''. It is a diagram that shows ''all'' possible logical relations between a finite collection of different sets. These diagrams depict element ...
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Amino Acid
Amino acids are organic compounds that contain both amino and carboxylic acid functional groups. Although hundreds of amino acids exist in nature, by far the most important are the alpha-amino acids, which comprise proteins. Only 22 alpha amino acids appear in the genetic code. Amino acids can be classified according to the locations of the core structural functional groups, as Alpha and beta carbon, alpha- , beta- , gamma- or delta- amino acids; other categories relate to Chemical polarity, polarity, ionization, and side chain group type (aliphatic, Open-chain compound, acyclic, aromatic, containing hydroxyl or sulfur, etc.). In the form of proteins, amino acid '' residues'' form the second-largest component (water being the largest) of human muscles and other tissues. Beyond their role as residues in proteins, amino acids participate in a number of processes such as neurotransmitter transport and biosynthesis. It is thought that they played a key role in enabling life ...
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User Study
Usability testing is a technique used in user-centered design, user-centered interaction design to evaluate a product by testing it on users. This can be seen as an irreplaceable usability practice, since it gives direct input on how real users use the system. It is more concerned with the design intuitiveness of the product and tested with users who have no prior exposure to it. Such testing is paramount to the success of an end product as a fully functioning application that creates confusion amongst its users will not last for long. This is in contrast with usability inspection methods where experts use different methods to evaluate a user interface without involving users. Usability testing focuses on measuring a human-made product's capacity to meet its intended purposes. Examples of products that commonly benefit from usability testing are food, consumer products, websites or web applications, user interface, computer interfaces, documents, and devices. Usability testing measu ...
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Visualization (graphics)
Visualization or visualisation (see spelling differences) is any technique for creating images, diagrams, or animations to communicate a message. Visualization through visual imagery has been an effective way to communicate both abstract and concrete ideas since the dawn of humanity. Examples from history include cave paintings, Egyptian hieroglyphs, Greek geometry, and Leonardo da Vinci's revolutionary methods of technical drawing for engineering and scientific purposes. Visualization today has ever-expanding applications in science, education, engineering (e.g., product visualization), interactive multimedia, medicine, etc. Typical of a visualization application is the field of computer graphics. The invention of computer graphics (and 3D computer graphics) may be the most important development in visualization since the invention of central perspective in the Renaissance period. The development of animation also helped advance visualization. Overview The use of visualiz ...
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