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PubGene
PubGene AS is a bioinformatics company located in Oslo, Norway and is the daughter company of PubGene Inc. In 2001, PubGene founders demonstrated one of the first applications of text mining to research in biomedicine (i.e., biomedical text mining). They went on to create the PubGene public search engine, exemplifying the approach they pioneered by presenting biomedical terms as graphical networks based on their co-occurrence in MEDLINE texts. The PubGene search engine has since been discontinued and incorporated into a commercial product. Co-occurrence networks provide a visual overview of possible relationships between terms and facilitate medical literature retrieval for relevant sets of articles implied by the network display. Commercial applications of the technology are available. Original development of PubGene technologies was undertaken in collaboration between the Norwegian Cancer Hospital (Radiumhospitalet) and the Norwegian University of Science and Technology. The w ...
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Biomedical Text Mining
Biomedical text mining (including biomedical natural language processing or BioNLP) refers to the methods and study of how text mining may be applied to texts and literature of the biomedical and molecular biology domains. As a field of research, biomedical text mining incorporates ideas from natural language processing, bioinformatics, medical informatics and computational linguistics. The strategies developed through studies in this field are frequently applied to the biomedical and molecular biology literature available through services such as PubMed. Considerations Applying text mining approaches to biomedical text requires specific considerations common to the domain. Availability of annotated text data Large annotated corpora used in the development and training of general purpose text mining methods (e.g., sets of movie dialogue, product reviews, or Wikipedia article text) are not specific for biomedical language. While they may provide evidence of general text propert ...
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Text Mining
Text mining, also referred to as ''text data mining'', similar to text analytics, is the process of deriving high-quality information from text. It involves "the discovery by computer of new, previously unknown information, by automatically extracting information from different written resources." Written resources may include websites, books, emails, reviews, and articles. High-quality information is typically obtained by devising patterns and trends by means such as statistical pattern learning. According to Hotho et al. (2005) we can distinguish between three different perspectives of text mining: information extraction, data mining, and a KDD (Knowledge Discovery in Databases) process. Text mining usually involves the process of structuring the input text (usually parsing, along with the addition of some derived linguistic features and the removal of others, and subsequent insertion into a database), deriving patterns within the structured data, and finally evaluation and inte ...
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Co-occurrence Networks
Co-occurrence network, sometimes referred to as a semantic network, is a method to analyze text that includes a graphic visualization of potential relationships between people, organizations, concepts, biological organisms like bacteria or other entities represented within written material. The generation and visualization of co-occurrence networks has become practical with the advent of electronically stored text compliant to text mining. By way of definition, co-occurrence networks are the collective interconnection of terms based on their paired presence within a specified unit of text. Networks are generated by connecting pairs of terms using a set of criteria defining co-occurrence. For example, terms A and B may be said to “co-occur” if they both appear in a particular article. Another article may contain terms B and C. Linking A to B and B to C creates a co-occurrence network of these three terms. Rules to define co-occurrence within a text corpus can be set according ...
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MEDLINE
MEDLINE (Medical Literature Analysis and Retrieval System Online, or MEDLARS Online) is a bibliographic database of life sciences and biomedical information. It includes bibliographic information for articles from academic journals covering medicine, nursing, pharmacy, dentistry, veterinary medicine, and health care. MEDLINE also covers much of the literature in biology and biochemistry, as well as fields such as molecular evolution. Compiled by the United States National Library of Medicine (NLM), MEDLINE is freely available on the Internet and searchable via PubMed and NLM's National Center for Biotechnology Information's Entrez system. History MEDLARS (Medical Literature Analysis and Retrieval System) is a computerised biomedical bibliographic retrieval system. It was launched by the National Library of Medicine in 1964 and was the first large scale, computer based, retrospective search service available to the general public. Initial development of MEDLARS Since 1879, ...
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Companies Established In 2001
A company, abbreviated as co., is a legal entity representing an association of people, whether natural, legal or a mixture of both, with a specific objective. Company members share a common purpose and unite to achieve specific, declared goals. Companies take various forms, such as: * voluntary associations, which may include nonprofit organizations * business entities, whose aim is generating profit * financial entities and banks * programs or educational institutions A company can be created as a legal person so that the company itself has limited liability as members perform or fail to discharge their duty according to the publicly declared incorporation, or published policy. When a company closes, it may need to be liquidated to avoid further legal obligations. Companies may associate and collectively register themselves as new companies; the resulting entities are often known as corporate groups. Meanings and definitions A company can be defined as an "artificial per ...
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Companies Based In Oslo
A company, abbreviated as co., is a legal entity representing an association of people, whether natural, legal or a mixture of both, with a specific objective. Company members share a common purpose and unite to achieve specific, declared goals. Companies take various forms, such as: * voluntary associations, which may include nonprofit organizations * business entities, whose aim is generating profit * financial entities and banks * programs or educational institutions A company can be created as a legal person so that the company itself has limited liability as members perform or fail to discharge their duty according to the publicly declared incorporation, or published policy. When a company closes, it may need to be liquidated to avoid further legal obligations. Companies may associate and collectively register themselves as new companies; the resulting entities are often known as corporate groups. Meanings and definitions A company can be defined as an "artificial per ...
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Medical Search Engines
Medicine is the science and practice of caring for a patient, managing the diagnosis, prognosis, prevention, treatment, palliation of their injury or disease, and promoting their health. Medicine encompasses a variety of health care practices evolved to maintain and restore health by the prevention and treatment of illness. Contemporary medicine applies biomedical sciences, biomedical research, genetics, and medical technology to diagnose, treat, and prevent injury and disease, typically through pharmaceuticals or surgery, but also through therapies as diverse as psychotherapy, external splints and traction, medical devices, biologics, and ionizing radiation, amongst others. Medicine has been practiced since prehistoric times, and for most of this time it was an art (an area of skill and knowledge), frequently having connections to the religious and philosophical beliefs of local culture. For example, a medicine man would apply herbs and say prayers for healing, or an ancie ...
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Bioinformatics Companies
{{Dynamic list This is a list of bioinformatics companies that have articles at Wikipedia: * Applied Maths provides the software suite BioNumerics * Astrid Research * BIOBASE * BioBam Bioinformatics creator of Blast2GO * Biomax Informatics AG bioinformatics services. * Biovia (formerly Accelrys). * Chemical Computing Group MOE software for structural modelling * CLC Bio Bioinformatics workbenches. * DNASTAR provides DNA sequence assembly and analysis. * Gene Codes Corporation * Genedata software for data analysis and storage. * GeneTalk web-based services. * GenoCAD * Genomatix * Genostar provides streamlined bioinformatics. * Inte:Ligand * Integromics * Invitae * Invitrogen creator of Vector NTI * Leidos Biomedical Research Inc. formerly SAIC. Services are aimed at the Federal Government market. * MacVector * QIAGEN Silicon Valley (formerly Ingenuity Systems) * Qlucore * Phalanx Biotech Group * SimBioSys created the eHITS software * SRA International services aimed ...
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Innovation Norway
Innovation Norway is a state-owned company and a national development bank. The company's programs and services are intended to stimulate entrepreneurship in Norway. Its head office is in Oslo, and an office in each of the Norwegian counties. It also has offices in 30 countries around the world. The company has over 500 employees worldwide and has supported maritime transportation, biotechnology, thin film, and alternative fuel. History Innovation Norway was formed in 2004 through the merger of four governmental organizations. These organizations were: * The Norwegian Tourist Board * The Norwegian Trade Council * The Norwegian Industrial and Regional Development Fund (SND) * The Government Consultative Office for Inventors (SVO) The “Sommarøy” controversy In the summer of 2019 Innovation Norway were involved in the production of a spoof news story about the island Sommarøy Sommarøy is an old fishing village in the western part of Tromsø Municipality in Troms og Finn ...
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Research Council Of Norway
The Research Council (also the Research Council of Norway; no, Norges forskningsråd) is a Norwegian government agency that funds research and innovation projects. On behalf of the Government, the Research Council invests NOK 11,9 billion (2021) annually. The Research Council is responsible for promoting basic and applied research and innovation. This is done by managing research funding and by advising the authorities on research policy, among other things through proposals for the research budget in the National Budget. The Research Council works to promote international research and innovation cooperation, and has a number of schemes to mobilise Norwegian applicants for the EU Research and Innovation Programme. Other tasks include creating meeting places for researchers, trade and industry, public administration, public actors and other users of research. The Research Council was established in 1993 through the merging of five different previously created research councils. ...
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Norwegian University Of Science And Technology
Norwegian, Norwayan, or Norsk may refer to: *Something of, from, or related to Norway, a country in northwestern Europe *Norwegians, both a nation and an ethnic group native to Norway *Demographics of Norway *The Norwegian language, including the two official written forms: **Bokmål, literally "book language", used by 85–90% of the population of Norway **Nynorsk, literally "New Norwegian", used by 10–15% of the population of Norway *The Norwegian Sea Norwegian or may also refer to: Norwegian *Norwegian Air Shuttle, an airline, trading as Norwegian **Norwegian Long Haul, a defunct subsidiary of Norwegian Air Shuttle, flying long-haul flights *Norwegian Air Lines, a former airline, merged with Scandinavian Airlines in 1951 *Norwegian coupling, used for narrow-gauge railways *Norwegian Cruise Line, a cruise line *Norwegian Elkhound, a canine breed. *Norwegian Forest cat, a domestic feline breed *Norwegian Red, a breed of dairy cattle *Norwegian Township, Schuylkill County, ...
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Radiumhospitalet
Oslo University Hospital, Radiumhospitalet ( no, Oslo universitetssykehus, Radiumhospitalet) is one of the four campuses of Oslo University Hospital in Oslo, Norway, and is dedicated to cancer treatment. This part of the hospital is the most specialized hospital in Norway for cancer therapy and research on cancer. The Norwegian Radium Hospital was an independent hospital from May 21, 1932, to 2005, when it merged with Rikshospitalet. The hospital was founded with Severin Andreas Heyerdahl as chief physician and director, and Hans L. C. Huitfeldt as chairman of the board. From 1983 to the merge with Rikshospitalet in 2005 Jan Vincents Johannessen was CEO. The Radium Hospital merged in 2005 with Rikshospitalet to create Rikshospitalet-Radiumhospitalet HF. On January 1, 2009, Rikshospitalet merged with Ullevål University Hospital and Aker University Hospital to create Oslo University Hospital Oslo University Hospital ( no, Oslo universitetssykehus; OUS) is a university hospital in ...
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