Phaeomoniellales
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Phaeomoniellales
Celotheliaceae is a family of fungi in the monotypic order Phaeomoniellales. It contains 27 species of crustose lichens with thalli that are more or less immersed in tree bark. Taxonomy The family was proposed in 2008 by Robert Lücking, André Aptroot, and Harrie Sipman, while the order was circumscribed in 2015. It is sister to the clade that includes the orders Verrucariales and Chaetothyriales. Molecular clock calculations suggest that the order originated when gymnosperm diversification occurred. The family Phaeomoniellaceae was proposed by Paul Kirk in 2015, using a reference to the description of the order Phaeomoniellales, circumscribed earlier that year. However, because '' Celothelium'' (the type genus of Celotheliaceae) is also included in the circumscription of the Phaeomoniellaceae, the older family name takes precedence and consequently, Phaeomoniellaceae is an illegitimate name according to nomenclatural rules; it is placed in synonymy with Celotheliaceae. Descr ...
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Robert Lücking
Robert Lücking (born 1964) is a German lichenologist. He is a leading expert on foliicolous lichens–lichens that live on leaves. Life and career Born in Ulm in 1964, Lücking earned both his master's (1990) and PhD degree (1994) at the University of Ulm. Both degrees concerned the taxonomy, ecology, and biodiversity of foliicolous lichens. His graduate supervisor was mycologist and bryologist Sieghard Winkler, who had previously studied epiphyllous (upper leaf-dwelling) fungi in El Salvador and Colombia. In 1996 Lücking was awarded the Mason E. Hale award for an "outstanding doctoral thesis presented by a candidate on a lichenological theme". His thesis was titled ''Foliikole Flechten und ihre Mikrohabitatpraferenzen in einem tropischen Regenwald in Costa Rica'' ("Foliicolous lichens and their microhabitat preferences in a tropical rainforest in Costa Rica"). In this work, Lücking recorded 177 foliicolous lichen species from the shrub layer in a Costa Rican tropical forest. L ...
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Type Genus
In biological taxonomy, the type genus is the genus which defines a biological family and the root of the family name. Zoological nomenclature According to the International Code of Zoological Nomenclature, "The name-bearing type of a nominal family-group taxon is a nominal genus called the 'type genus'; the family-group name is based upon that of the type genus." Any family-group name must have a type genus (and any genus-group name must have a type species, but any species-group name may, but need not, have one or more type specimens). The type genus for a family-group name is also the genus that provided the stem to which was added the ending -idae (for families). :Example: The family name Formicidae has as its type genus the genus ''Formica'' Linnaeus, 1758. Botanical nomenclature In botanical nomenclature, the phrase "type genus" is used, unofficially, as a term of convenience. In the '' ICN'' this phrase has no status. The code uses type specimens for ranks up to fam ...
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Biological Pigment
Biological pigments, also known simply as pigments or biochromes, are substances produced by living organisms that have a color resulting from selective color absorption. Biological pigments include plant pigments and flower pigments. Many biological structures, such as skin, eyes, feathers, fur and hair contain pigments such as melanin in specialized cells called chromatophores. In some species, pigments accrue over very long periods during an individual's lifespan. Pigment color differs from structural color in that it is the same for all viewing angles, whereas structural color is the result of selective reflection or iridescence, usually because of multilayer structures. For example, butterfly wings typically contain structural color, although many butterflies have cells that contain pigment as well. Biological pigments See conjugated systems for electron bond chemistry that causes these molecules to have pigment. * Heme/porphyrin-based: chlorophyll, bilirubin, hemocy ...
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Congo Red
Congo red is an organic compound, the sodium salt of 3,3′-( ,1′-biphenyl4,4′-diyl)bis(4-aminonaphthalene-1-sulfonic acid). It is an azo dye. Congo red is water-soluble, yielding a red colloidal solution; its solubility is greater in organic solvents. However, the use of Congo red has long been abandoned, primarily because of its carcinogenic properties.Klaus Hunger, Peter Mischke, Wolfgang Rieper, Roderich Raue, Klaus Kunde, Aloys Engel: "Azo Dyes" in ''Ullmann’s Encyclopedia of Industrial Chemistry'', 2005, Wiley-VCH, Weinheim.. History Congo red was first synthesized in 1883 by Paul Böttiger, who had been employed at Friedrich Bayer Company in Elberfeld, Germany. He was looking for textile dyes that did not require a mordant step. The company which had a right of first refusal to his inventions was not interested in this bright red color, so he filed the patent under his own name and sold it to the AGFA company of Berlin. AGFA marketed the dye under the name "Congo ...
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Iodine
Iodine is a chemical element with the symbol I and atomic number 53. The heaviest of the stable halogens, it exists as a semi-lustrous, non-metallic solid at standard conditions that melts to form a deep violet liquid at , and boils to a violet gas at . The element was discovered by the French chemist Bernard Courtois in 1811 and was named two years later by Joseph Louis Gay-Lussac, after the Ancient Greek 'violet-coloured'. Iodine occurs in many oxidation states, including iodide (I−), iodate (), and the various periodate anions. It is the least abundant of the stable halogens, being the sixty-first most abundant element. As the heaviest essential mineral nutrient, iodine is required for the synthesis of thyroid hormones. Iodine deficiency affects about two billion people and is the leading preventable cause of intellectual disabilities. The dominant producers of iodine today are Chile and Japan. Due to its high atomic number and ease of attachment to organic compound ...
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Staining
Staining is a technique used to enhance contrast in samples, generally at the microscopic level. Stains and dyes are frequently used in histology (microscopic study of biological tissues), in cytology (microscopic study of cells), and in the medical fields of histopathology, hematology, and cytopathology that focus on the study and diagnoses of diseases at the microscopic level. Stains may be used to define biological tissues (highlighting, for example, muscle fibers or connective tissue), cell populations (classifying different blood cells), or organelles within individual cells. In biochemistry, it involves adding a class-specific ( DNA, proteins, lipids, carbohydrates) dye to a substrate to qualify or quantify the presence of a specific compound. Staining and fluorescent tagging can serve similar purposes. Biological staining is also used to mark cells in flow cytometry, and to flag proteins or nucleic acids in gel electrophoresis. Light microscopes are used for viewin ...
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Hymenium
The hymenium is the tissue layer on the hymenophore of a fungal fruiting body where the cells develop into basidia or asci, which produce spores. In some species all of the cells of the hymenium develop into basidia or asci, while in others some cells develop into sterile cells called cystidia (basidiomycetes) or paraphyses (ascomycetes). Cystidia are often important for microscopic identification. The subhymenium consists of the supportive hyphae from which the cells of the hymenium grow, beneath which is the hymenophoral trama, the hyphae that make up the mass of the hymenophore. The position of the hymenium is traditionally the first characteristic used in the classification and identification of mushrooms. Below are some examples of the diverse types which exist among the macroscopic Basidiomycota and Ascomycota. * In agarics, the hymenium is on the vertical faces of the gills. * In boletes and polypores, it is in a spongy mass of downward-pointing tubes. * In puffballs, ...
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Ascus
An ascus (; ) is the sexual spore-bearing cell produced in ascomycete fungi. Each ascus usually contains eight ascospores (or octad), produced by meiosis followed, in most species, by a mitotic cell division. However, asci in some genera or species can occur in numbers of one (e.g. ''Monosporascus cannonballus''), two, four, or multiples of four. In a few cases, the ascospores can bud off conidia that may fill the asci (e.g. ''Tympanis'') with hundreds of conidia, or the ascospores may fragment, e.g. some ''Cordyceps'', also filling the asci with smaller cells. Ascospores are nonmotile, usually single celled, but not infrequently may be coenocytic (lacking a septum), and in some cases coenocytic in multiple planes. Mitotic divisions within the developing spores populate each resulting cell in septate ascospores with nuclei. The term ocular chamber, or oculus, refers to the epiplasm (the portion of cytoplasm not used in ascospore formation) that is surrounded by the "bourrelet ...
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Ostiole
An ''ostiole'' is a small hole or opening through which algae or fungi release their mature spores. The word is a diminutive of "ostium", "opening". The term is also used in higher plants, for example to denote the opening of the involuted syconium (fig inflorescence) through which fig wasps enter to pollinate and breed. Sometimes a stoma In botany, a stoma (from Greek ''στόμα'', "mouth", plural "stomata"), also called a stomate (plural "stomates"), is a pore found in the epidermis of leaves, stems, and other organs, that controls the rate of gas exchange. The pore is bor ...tal aperture is called an "ostiole"."Synergistic Pectin Degradation and Guard Cell Pressurization Underlie Stomatal Pore Formation", See also * Ostium (other) References Fungal morphology and anatomy Plant anatomy {{botany-stub ...
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Ascomata
An ascocarp, or ascoma (), is the fruiting body ( sporocarp) of an ascomycete phylum fungus. It consists of very tightly interwoven hyphae and millions of embedded asci, each of which typically contains four to eight ascospores. Ascocarps are most commonly bowl-shaped (apothecia) but may take on a spherical or flask-like form that has a pore opening to release spores (perithecia) or no opening (cleistothecia). Classification The ascocarp is classified according to its placement (in ways not fundamental to the basic taxonomy). It is called ''epigeous'' if it grows above ground, as with the morels, while underground ascocarps, such as truffles, are termed ''hypogeous''. The structure enclosing the hymenium is divided into the types described below (apothecium, cleistothecium, etc.) and this character ''is'' important for the taxonomic classification of the fungus. Apothecia can be relatively large and fleshy, whereas the others are microscopic—about the size of flecks of ...
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Trentepohlia (alga)
''Trentepohlia'' is a genus of filamentous chlorophyte green algae in the family Trentepohliaceae, living free on terrestrial supports such as tree trunks and wet rocks or symbiotically in lichens. The filaments of ''Trentepohlia'' have a strong orange colour (photograph at right) caused by the presence of large quantities of carotenoid pigments which mask the green of the chlorophyll. ''Trentepohlia'' species form associations with fungal hyphae, and are widespread phycobionts in lichens, such as the "secret writing" crustose lichen genera '' Graphis'', ''Graphina'', ''Gyalecta'' and ''Opegrapha''.F.S. Dobson (2000) Lichens, an illustrated guide to the British and Irish species. Richmond publishing Co. T. Friedl and B. Büdel (1996) Photobionts, in Nash, T.H. (ed.) Lichen biology, pp.8-23, Cambridge University Press. There are about 40 species of ''Trentepohlia'' mostly distributed in tropical and subtropical areas but several species also occur in temperate environments inclu ...
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