Pseudomonas Tremae
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Pseudomonas Tremae
''Pseudomonas tremae'' is a white, Gram-negative, non-fluorescent, motile, flagellated, aerobic bacterium that infects ''Trema orientalis'', from which it derives its name. It was formerly classified as a pathovar of ''Pseudomonas syringae ''Pseudomonas syringae'' is a rod-shaped, Gram-negative bacterium with polar flagella. As a plant pathogen, it can infect a wide range of species, and exists as over 50 different pathovars, all of which are available to researchers from intern ...'', but following ribotypical analysis, it was instated as a species. The type strain is CFBP 3229. References External links Type strain of ''Pseudomonas tremae'' at Bac''Dive'' - the Bacterial Diversity Metadatabase Pseudomonadales Bacterial tree pathogens and diseases Bacteria described in 1999 {{Pseudomonadales-stub ...
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Gram-negative
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the Gram staining method of bacterial differentiation. They are characterized by their cell envelopes, which are composed of a thin peptidoglycan cell wall sandwiched between an inner cytoplasmic cell membrane and a bacterial outer membrane. Gram-negative bacteria are found in virtually all environments on Earth that support life. The gram-negative bacteria include the model organism ''Escherichia coli'', as well as many pathogenic bacteria, such as ''Pseudomonas aeruginosa'', ''Chlamydia trachomatis'', and ''Yersinia pestis''. They are a significant medical challenge as their outer membrane protects them from many antibiotics (including penicillin), detergents that would normally damage the inner cell membrane, and lysozyme, an antimicrobial enzyme produced by animals that forms part of the innate immune system. Additionally, the outer leaflet of this membrane comprises a complex lipo ...
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Fluorescent
Fluorescence is the emission of light by a substance that has absorbed light or other electromagnetic radiation. It is a form of luminescence. In most cases, the emitted light has a longer wavelength, and therefore a lower photon energy, than the absorbed radiation. A perceptible example of fluorescence occurs when the absorbed radiation is in the ultraviolet region of the electromagnetic spectrum (invisible to the human eye), while the emitted light is in the visible region; this gives the fluorescent substance a distinct color that can only be seen when the substance has been exposed to UV light. Fluorescent materials cease to glow nearly immediately when the radiation source stops, unlike phosphorescent materials, which continue to emit light for some time after. Fluorescence has many practical applications, including mineralogy, gemology, medicine, chemical sensors (fluorescence spectroscopy), fluorescent labelling, dyes, biological detectors, cosmic-ray detection, vacuu ...
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Motile
Motility is the ability of an organism to move independently, using metabolic energy. Definitions Motility, the ability of an organism to move independently, using metabolic energy, can be contrasted with sessility, the state of organisms that do not possess a means of self-locomotion and are normally immobile. Motility differs from mobility, the ability of an object to be moved. The term vagility encompasses both motility and mobility; sessile organisms including plants and fungi often have vagile parts such as fruits, seeds, or spores which may be dispersed by other agents such as wind, water, or other organisms. Motility is genetically determined, but may be affected by environmental factors such as toxins. The nervous system and musculoskeletal system provide the majority of mammalian motility. In addition to animal locomotion, most animals are motile, though some are vagile, described as having passive locomotion. Many bacteria and other microorganisms, and multicellu ...
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Flagella
A flagellum (; ) is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates. A microorganism may have from one to many flagella. A gram-negative bacterium ''Helicobacter pylori'' for example uses its multiple flagella to propel itself through the mucus lining to reach the stomach epithelium, where it may cause a gastric ulcer to develop. In some bacteria the flagellum can also function as a sensory organelle, being sensitive to wetness outside the cell. Across the three domains of Bacteria, Archaea, and Eukaryota the flagellum has a different structure, protein composition, and mechanism of propulsion but shares the same function of providing motility. The Latin word means " whip" to describe its lash-like swimming motion. The flagellum in archaea is called the archaellum to note its difference from the bacterial flagellum. Eukaryoti ...
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Aerobic Organism
Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics, a form of aerobic exercise * Aerobic respiration, the aerobic process of cellular respiration * Aerobic organism Aerobic means "requiring air," in which "air" usually means oxygen. Aerobic may also refer to * Aerobic exercise, prolonged exercise of moderate intensity * Aerobics Aerobics is a form of physical exercise that combines rhythmic aerobic exe ..., a living thing with an oxygen-based metabolism See also * Anaerobic (other) {{disambiguation ...
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Bacterium
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationshi ...
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Trema Orientalis
''Trema orientale'' (sometimes spelled ''Trema orientalis'') is a species of flowering tree in the hemp family, Cannabaceae. The basionym of ''T. orientalis'', ''Celtis orientalis'' was originally described and published in ''Species Plantarum'' 2: 1044. 1753. It is known by many common names, including charcoal-tree, Indian charcoal-tree, pigeon wood, Oriental trema, and in Hawaii, where it has become naturalized, gunpowder tree, or nalita. It has a near universal distribution in tropical and warm temperate parts of the Old World, with a range extending from South Africa, through the Middle East, the Indian subcontinent and southern China to Southeast Asia and Australia. Distribution ''Trema orientale'' is native to tropical and southern Africa (including Madagascar), Asia (the Arabian Peninsula, China, eastern Asia, tropical Asia) and Australia. Uses The wood is relatively soft, and burns easily and quickly when dry. The wood is suitable for paper and pulp produc ...
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Pathovar
A pathovar is a bacterial strain or set of strains with the same or similar characteristics, that is differentiated at infrasubspecific level from other strains of the same species or subspecies on the basis of distinctive pathogenicity to one or more plant hosts. Pathovars are named as a ternary or quaternary addition to the species binomial name, for example the bacterium that causes citrus canker ''Xanthomonas axonopodis'', has several pathovars with different host ranges, ''X. axonopodis'' pv. ''citri'' is one of them; the abbreviation 'pv.' means pathovar. The type strains of pathovars are pathotypes, which are distinguished from the types (holotype, neotype, etc.) of the species to which the pathovar belongs. See also * Infraspecific names in botany * Phytopathology * Trinomen In biology, trinomial nomenclature refers to names for taxa below the rank of species. These names have three parts. The usage is different in zoology and botany. In zoology In zoological ...
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Pseudomonas Syringae
''Pseudomonas syringae'' is a rod-shaped, Gram-negative bacterium with polar flagella. As a plant pathogen, it can infect a wide range of species, and exists as over 50 different pathovars, all of which are available to researchers from international culture collections such as the NCPPB, ICMP, and others. ''Pseudomonas syringae'' is a member of the genus ''Pseudomonas'', and based on 16S rRNA analysis, it has been placed in the ''P. syringae'' group. It is named after the lilac tree (''Syringa vulgaris''), from which it was first isolated. A phylogenomic analysis of 494 complete genomes from the entire ''Pseudomonas'' genus showed that ''P. syringae'' does not form a monophyletic species in the strict sense, but a wider evolutionary group that also included other species as well, such as ''P. avellanae'', ''P. savastanoi'', ''P. amygdali'', and ''P. cerasi''. ''Pseudomonas syringae'' tests negative for arginine dihydrolase and oxidase activity, and forms the polymer levan ...
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Ribotyping
Ribotyping is a molecular technique for bacterial identification and characterization that uses information from rRNA-based phylogenetic analyses. It is a rapid and specific method widely used in clinical diagnostics and analysis of microbial communities in food, water, and beverages. All bacteria have ribosomal genes, but the exact sequence is unique to each species, serving as a genetic fingerprint. Therefore, sequencing the particular 16S gene and comparing it to a database would yield identification of the particular species. Technique Ribotyping involves the digestion of bacterial genomic DNA with specific restriction enzymes. Each restriction enzyme cuts DNA at a specific nucleotide sequence, resulting in fragments of different lengths. Those fragments are then run on a Gel electrophoresis, where they are separated according to size: the application of electrical field to the gel in which they are suspended causes the movement of DNA fragments (all negatively charged due to ...
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Pseudomonadales
The Pseudomonadales are an order of Pseudomonadota. A few members are pathogens, such as species of ''Pseudomonas'', ''Moraxella'', and ''Acinetobacter'', which may cause disease in humans, animals and plants. ''Pseudomonas'' The bacterial genus ''Pseudomonas'' includes the opportunistic human pathogen ''P. aeruginosa'', plant pathogenic bacteria, plant beneficial bacteria, ubiquitous soil bacteria with bioremediation capabilities and other species that cause spoilage of milk and dairy products. ''Pseudomonas aeruginosa'' can cause chronic opportunistic infections that have become increasingly apparent in immunocompromised patients and the ageing population of industrialised societies. The genome sequences of several pseudomonads have become available in recent years and researchers are beginning to use the data to make new discoveries about this bacterium. ''Acinetobacter'' The genus ''Acinetobacter'' is a group of Gram-negative, nonmotile and nonfermentative bacteria belongin ...
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Bacterial Tree Pathogens And Diseases
Bacteria (; singular: bacterium) are ubiquitous, mostly free-living organisms often consisting of one biological cell. They constitute a large domain of prokaryotic microorganisms. Typically a few micrometres in length, bacteria were among the first life forms to appear on Earth, and are present in most of its habitats. Bacteria inhabit soil, water, acidic hot springs, radioactive waste, and the deep biosphere of Earth's crust. Bacteria are vital in many stages of the nutrient cycle by recycling nutrients such as the fixation of nitrogen from the atmosphere. The nutrient cycle includes the decomposition of dead bodies; bacteria are responsible for the putrefaction stage in this process. In the biological communities surrounding hydrothermal vents and cold seeps, extremophile bacteria provide the nutrients needed to sustain life by converting dissolved compounds, such as hydrogen sulphide and methane, to energy. Bacteria also live in symbiotic and parasitic relationships wi ...
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