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Phoma Costaricensis
''Phoma costaricensis'' is a plant pathogen infecting coffee Coffee is a drink prepared from roasted coffee beans. Darkly colored, bitter, and slightly acidic, coffee has a stimulating effect on humans, primarily due to its caffeine content. It is the most popular hot drink in the world. Seeds of .... It is a soil fungus that infects the leaves and fruits of the coffee plant prior to the fruit ripening. References External links Index FungorumUSDA ARS Fungal Database Fungal plant pathogens and diseases Coffee diseases Phoma Fungi described in 1957 {{fungus-plant-disease-stub ...
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Fungus
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which by one traditional classification include Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''tru ...
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Ascomycota
Ascomycota is a phylum of the kingdom Fungi that, together with the Basidiomycota, forms the subkingdom Dikarya. Its members are commonly known as the sac fungi or ascomycetes. It is the largest phylum of Fungi, with over 64,000 species. The defining feature of this fungal group is the " ascus" (), a microscopic sexual structure in which nonmotile spores, called ascospores, are formed. However, some species of the Ascomycota are asexual, meaning that they do not have a sexual cycle and thus do not form asci or ascospores. Familiar examples of sac fungi include morels, truffles, brewers' and bakers' yeast, dead man's fingers, and cup fungi. The fungal symbionts in the majority of lichens (loosely termed "ascolichens") such as '' Cladonia'' belong to the Ascomycota. Ascomycota is a monophyletic group (it contains all descendants of one common ancestor). Previously placed in the Deuteromycota along with asexual species from other fungal taxa, asexual (or anamorphic) ascomycet ...
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Dothideomycetes
Dothideomycetes is the largest and most diverse class of ascomycete fungi. It comprises 11 orders 90 families, 1300 genera and over 19,000 known species. Traditionally, most of its members were included in the loculoascomycetes, which is not part of the currently accepted classification. This indicates that several traditional morphological features in the class are not unique and DNA sequence comparisons are important to define the class. The designation loculoascomycetes was first proposed for all fungi which have ascolocular development. This type of development refers to the way in which the sexual structure, bearing the sexual spores (ascospores) forms. Dothideomycetes mostly produce flask-like structures referred to as pseudothecia, although other shape variations do exist (e.g. see structures found in Hysteriales). During ascolocular development pockets (locules) form first within the vegetative cells of the fungus and then all the subsequent structures form. These inc ...
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Pleosporomycetidae
Pleosporomycetidae is a subclass of Dothideomycetes consisting of four orders: Pleosporales, Hysteriales, Mytilinidiales, and Jahnulales. One of its defining features is the presence of pseudoparaphyses.Eriksson OE, 1981. The families of bitunicate ascomycetes. Opera Botanica 60, 1-220. These are sterile cells extending down from the upper portion of the cavity inside sexual structures containing the sac-like asci with sexually produced spores (ascospores). Pseudoparaphyses are initially attached at both their ends, but sometimes the upper part may become free. Some orders and families where these cells are present remain outside the subclass since DNA based phylogenies A phylogenetic tree (also phylogeny or evolutionary tree Felsenstein J. (2004). ''Inferring Phylogenies'' Sinauer Associates: Sunderland, MA.) is a branching diagram or a tree showing the evolutionary relationships among various biological spec ... cannot place them with confidence. However they could conc ...
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Pleosporales
The Pleosporales is the largest order in the fungal class Dothideomycetes. By a 2008 estimate it contains 23 families, 332 genera and more than 4700 species. The majority of species are saprobes on decaying plant material in fresh water, marine, or terrestrial environments, but several species are also associated with living plants as parasites, epiphytes or endophytes. The best studied species cause plant diseases on important agricultural crops e.g. ''Cochliobolus heterostrophus'', causing southern corn leaf blight on maize, '' Phaeosphaeria nodorum'' (''Stagonospora nodorum'') causing glume blotch on wheat and '' Leptosphaeria maculans'' causing a stem canker (called blackleg) on cabbage crops ('' Brassica''). Some species of Pleosporales occur on animal dung and a small number occur as lichens and rock-inhabiting fungi. Taxonomy The order was proposed in 1955 as Dothideomycetes with perithecioid ascomata with pseudoparaphyses amongst the asci, at which time there were ...
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Incertae Sedis
' () or ''problematica'' is a term used for a taxonomic group where its broader relationships are unknown or undefined. Alternatively, such groups are frequently referred to as "enigmatic taxa". In the system of open nomenclature, uncertainty at specific taxonomic levels is indicated by ' (of uncertain family), ' (of uncertain suborder), ' (of uncertain order) and similar terms. Examples *The fossil plant '' Paradinandra suecica'' could not be assigned to any family, but was placed ''incertae sedis'' within the order Ericales when described in 2001. * The fossil '' Gluteus minimus'', described in 1975, could not be assigned to any known animal phylum. The genus is therefore ''incertae sedis'' within the kingdom Animalia. * While it was unclear to which order the New World vultures (family Cathartidae) should be assigned, they were placed in Aves ''incertae sedis''. It was later agreed to place them in a separate order, Cathartiformes. * Bocage's longbill, ''Motacilla boca ...
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Phoma
''Phoma'' is a genus of common coelomycetous soil fungi. It contains many plant pathogenic species. Description Spores are colorless and unicellular. The pycnidia are black and depressed in the tissues of the host. ''Phoma'' is arbitrarily limited to those species in which the spores are less than 15  µm as the larger spored forms have been placed in the genus '' Macrophoma''. The most important species include '' Phoma beta'' which is the cause of the heart rot and blight of beets, '' Phoma batata'' that produces a dry rot of sweet potato, and '' Phoma solani''. Taxonomy About 140 ''Phoma'' taxa have been defined and recognized which may be divided into two large groups: (i) plurivorous fungi, generally saprobic or weakly parasitic, mainly from temperate regions in Eurasia, but occasionally also found in other parts of the world (including areas with cool or warm climates); and (ii) specific pathogens of cultivated plants. However other estimates place the number of ...
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Coffea Arabica
''Coffea arabica'' (), also known as the Arabic coffee, is a species of flowering plant in the coffee and madder family Rubiaceae. It is believed to be the first species of coffee to have been cultivated and is currently the dominant cultivar, representing about 60% of global production. Coffee produced from the less acidic, more bitter, and more highly caffeinated robusta bean ('' C. canephora'') makes up most of the remaining coffee production. Arabica coffee originates from and was first cultivated in Yemen, and documented by the 12th century. ''Coffea arabica'' is called () in Arabic, borrowed from the Amharic "Buna". Taxonomy ''Coffea arabica'' was first described scientifically by Antoine de Jussieu, who named it ''Jasminum arabicum'' after studying a specimen from the Botanic Gardens of Amsterdam. Linnaeus placed it in its own genus ''Coffea'' in 1737. ''Coffea arabica'' is the only polyploid species of the genus ''Coffea,'' as it carries 4 copies of the 11 chromoso ...
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Fungal Plant Pathogens And Diseases
A fungus ( : fungi or funguses) is any member of the group of eukaryotic organisms that includes microorganisms such as yeasts and molds, as well as the more familiar mushrooms. These organisms are classified as a kingdom, separately from the other eukaryotic kingdoms, which by one traditional classification include Plantae, Animalia, Protozoa, and Chromista. A characteristic that places fungi in a different kingdom from plants, bacteria, and some protists is chitin in their cell walls. Fungi, like animals, are heterotrophs; they acquire their food by absorbing dissolved molecules, typically by secreting digestive enzymes into their environment. Fungi do not photosynthesize. Growth is their means of mobility, except for spores (a few of which are flagellated), which may travel through the air or water. Fungi are the principal decomposers in ecological systems. These and other differences place fungi in a single group of related organisms, named the ''Eumycota'' (''true ...
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Coffee Diseases
This article is a list of diseases of coffee (''Coffea arabica, Coffea canephora''). Fungal diseases Nematodes, parasitic Viral diseases Miscellaneous diseases and disorders * Leaf miners (moths) - Leucoptera caffeina, Leucoptera coffeella References Extensive details and images, including on coffee rust epidemic, also in French, Spanish and PortugueseCommon Names of Diseases, The American Phytopathological SocietyCommon Names of Plant Diseases, International Society for Molecular Plant-Microbe Interactions{Registration required * Coffee Coffee is a drink prepared from roasted coffee beans. Darkly colored, bitter, and slightly acidic, coffee has a stimulating effect on humans, primarily due to its caffeine content. It is the most popular hot drink in the world. Seeds of ...
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